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Aliases for UXT-AS1 Gene

Subcategory (RNA class) for UXT-AS1 Gene


Quality Score for this RNA gene is


Aliases for UXT-AS1 Gene

  • UXT Antisense RNA 1 2 3 5

External Ids for UXT-AS1 Gene

ORGUL Members for UXT-AS1 Gene

Previous GeneCards Identifiers for UXT-AS1 Gene

  • GC0XP047520

Summaries for UXT-AS1 Gene

GeneCards Summary for UXT-AS1 Gene

UXT-AS1 (UXT Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UXT-AS1 Gene

Genomics for UXT-AS1 Gene

Regulatory Elements for UXT-AS1 Gene

Enhancers for UXT-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF047216 0.4 ENCODE 11.2 -440.3 -440315 5.0 HDGF PKNOX1 WRNIP1 SIN3A DMAP1 FEZF1 ZNF2 YY1 ZNF207 ZNF143 LOC100113397 ZNF674-AS1 LINC01560 ZNF81 ZNF182 INE1 UXT-AS1 LOC100419232 SNORA11C ZNF674
GH0XF048020 1.4 FANTOM5 Ensembl ENCODE 10.3 +362.6 362593 2.1 TBP PKNOX1 WRNIP1 ZNF76 KLF17 RAD21 BRCA1 ZNF2 ZBTB40 YY1 ZNF182 ZNF630 LINC01560 UXT-AS1 SYN1 PIR35699 ZNF630-AS1
GH0XF048538 0.5 ENCODE 10.3 +881.1 881076 3.3 HDGF PKNOX1 ATF1 ARID4B SIN3A FEZF1 DMAP1 BRCA1 ZNF2 YY1 TBC1D25 ENSG00000204620 RBM3 RN7SL262P LOC101927635 PORCN FTSJ1 ZNF630 ENSG00000228343 ZNF182
GH0XF048464 1.1 Ensembl ENCODE 10.3 +806.9 806880 1.6 JUND ZNF585B FOS EBF1 RN7SL262P ZNF630 ZNF182 LINC01560 UXT-AS1 SLC38A5 LOC791096
GH0XF047657 0.5 ENCODE 9 -0.1 -94 2.9 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 FOS KLF13 INE1 ENSG00000204620 ZNF81 NUS1P1 UXT-AS1 ELK1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around UXT-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UXT-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for UXT-AS1 Gene

47,658,833 bp from pter
47,660,377 bp from pter
1,545 bases
Plus strand

Genomic View for UXT-AS1 Gene

Genes around UXT-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UXT-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UXT-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UXT-AS1 Gene

Proteins for UXT-AS1 Gene

Post-translational modifications for UXT-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UXT-AS1 Gene

Domains & Families for UXT-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UXT-AS1 Gene

Function for UXT-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UXT-AS1 Gene

Localization for UXT-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UXT-AS1 Gene

Pathways & Interactions for UXT-AS1 Gene

SuperPathways for UXT-AS1 Gene

No Data Available

Interacting Proteins for UXT-AS1 Gene

Gene Ontology (GO) - Biological Process for UXT-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for UXT-AS1 Gene

Transcripts for UXT-AS1 Gene

mRNA/cDNA for UXT-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UXT-AS1 Gene

No ASD Table

Relevant External Links for UXT-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for UXT-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UXT-AS1 Gene

genes like me logo Genes that share expression patterns with UXT-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UXT-AS1 Gene

Orthologs for UXT-AS1 Gene

Evolution for UXT-AS1 Gene

Gene Tree for UXT-AS1 (if available)
Gene Tree for UXT-AS1 (if available)

No data available for Orthologs for UXT-AS1 Gene

Paralogs for UXT-AS1 Gene

No data available for Paralogs for UXT-AS1 Gene

Variants for UXT-AS1 Gene

Sequence variations from dbSNP and Humsavar for UXT-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs111625597 -- 47,657,865(+) CTTTC(G/T)GATGG upstream-variant-2KB, splice-acceptor-variant
rs11550676 -- 47,658,931(-) GAGCC(A/C)ATCAT nc-transcript-variant, reference, synonymous-codon, utr-variant-5-prime
rs11798394 -- 47,657,068(+) CAGCT(C/T)TGAAG intron-variant, upstream-variant-2KB
rs138695480 -- 47,658,843(+) CCGCT(G/T)CAGCA nc-transcript-variant, reference, missense
rs139062431 -- 47,659,597(+) TCCTG(G/T)CAATG intron-variant, upstream-variant-2KB

Relevant External Links for UXT-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UXT-AS1 Gene

Disorders for UXT-AS1 Gene

Relevant External Links for UXT-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for UXT-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UXT-AS1 Gene

Publications for UXT-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for UXT-AS1 Gene

Sources for UXT-AS1 Gene

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