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Aliases for USP46-AS1 Gene

Subcategory (RNA class) for USP46-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for USP46-AS1 Gene

  • USP46 Antisense RNA 1 2 3
  • USP46 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for USP46-AS1 Gene

ORGUL Members for USP46-AS1 Gene

Previous GeneCards Identifiers for USP46-AS1 Gene

  • GC04P053522

Summaries for USP46-AS1 Gene

GeneCards Summary for USP46-AS1 Gene

USP46-AS1 (USP46 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP46-AS1 Gene

Genomics for USP46-AS1 Gene

Genomic Location for USP46-AS1 Gene

Start:
52,659,406 bp from pter
End:
52,661,668 bp from pter
Size:
2,263 bases
Orientation:
Plus strand

Genomic View for USP46-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for USP46-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP46-AS1 Gene

No data available for Regulatory Elements for USP46-AS1 Gene

Proteins for USP46-AS1 Gene

Post-translational modifications for USP46-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP46-AS1 Gene

Domains for USP46-AS1 Gene

Gene Families for USP46-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with USP46-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for USP46-AS1 Gene

Function for USP46-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for USP46-AS1 Gene

Localization for USP46-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for USP46-AS1 Gene

Pathways for USP46-AS1 Gene

SuperPathways for USP46-AS1 Gene

No Data Available

Interacting Proteins for USP46-AS1 Gene

Gene Ontology (GO) - Biological Process for USP46-AS1 Gene

None

No data available for Pathways by source for USP46-AS1 Gene

Transcripts for USP46-AS1 Gene

mRNA/cDNA for USP46-AS1 Gene

(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for USP46-AS1 Gene

USP46 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate USP46-AS1
    • Block miRNA regulation of USP46-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for USP46-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for USP46-AS1 Gene

    No ASD Table

    Relevant External Links for USP46-AS1 Gene

    GeneLoc Exon Structure for
    USP46-AS1
    ECgene alternative splicing isoforms for
    USP46-AS1

    Expression for USP46-AS1 Gene

    mRNA expression in normal human tissues for USP46-AS1 Gene

    SOURCE GeneReport for Unigene cluster for USP46-AS1 Gene Hs.631514

    genes like me logo Genes that share expressions with USP46-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for USP46-AS1 Gene

    Orthologs for USP46-AS1 Gene

    Evolution for USP46-AS1 Gene

    ENSEMBL:
    Gene Tree for USP46-AS1 (if available)
    TreeFam:
    Gene Tree for USP46-AS1 (if available)

    No data available for Orthologs for USP46-AS1 Gene

    Paralogs for USP46-AS1 Gene

    No data available for Paralogs for USP46-AS1 Gene

    Variants for USP46-AS1 Gene

    Sequence variations from dbSNP and Humsavar for USP46-AS1 Gene

    SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
    rs113865914 -- 52,661,713(+) CTACA(C/T)GGCTG intron-variant, downstream-variant-500B
    rs143003151 -- 52,661,511(+) CTAAA(A/T)TGGAA intron-variant, downstream-variant-500B
    rs149830250 -- 52,661,909(+) GTGGC(-/A)CCTCC intron-variant, downstream-variant-500B
    rs182095174 -- 52,661,405(+) GGCAG(C/T)GAATT nc-transcript-variant
    rs183382353 -- 52,661,919(+) CCCCC(C/T)CCCCC intron-variant, downstream-variant-500B

    Relevant External Links for USP46-AS1 Gene

    HapMap Linkage Disequilibrium report
    USP46-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for USP46-AS1 Gene

    Disorders for USP46-AS1 Gene

    No disorders were found for USP46-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for USP46-AS1 Gene

    Publications for USP46-AS1 Gene

    1. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3

    Products for USP46-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate USP46-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for USP46-AS1
      • Block miRNA regulation of USP46-AS1 using miScript Target Protectors

      Sources for USP46-AS1 Gene

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