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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

USP33 Gene

protein-coding   GIFtS: 56
GCID: GC01M078161

ubiquitin specific peptidase 33

(Previous name: ubiquitin specific protease 33 )
 Explore 7 diseases affiliated with
USP33 via our new
 Human Malady Compendium 
Biological research products
for USP33
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ubiquitin Specific Peptidase 331 2     Ubiquitin Specific Protease 331
VDU11 2 3     PVHL-Interacting Deubiquitinating Enzyme 12
KIAA10971 3     Ubiquitin Carboxyl-Terminal Hydrolase 332
Deubiquitinating Enzyme 332 3     Ubiquitin Thiolesterase 332
Ubiquitin Thioesterase 332 3     EC 3.4.19.123
Ubiquitin-Specific-Processing Protease 332 3     HVDU11
VHL-Interacting Deubiquitinating Enzyme 12 3     EC 3.1.2.158

External Ids:    HGNC: 200591   Entrez Gene: 230322   Ensembl: ENSG000000772547   UniProtKB: Q8TEY73   

Export aliases for USP33 gene to outside databases

Previous GC identifers: GC01M077566 GC01M077584 GC01M077873 GC01M076293


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for USP33:
This gene encodes a deubiquinating enzyme important in a variety of processes, including Slit-dependent cell migration
and beta-2 adrenergic receptor signaling. The protein is negatively regulated through ubiquitination by von
Hippel-Lindau tumor protein (VHL). Alternative splicing results in multiple transcript variants and protein isoforms.
(provided by RefSeq, Jun 2012)

UniProtKB/Swiss-Prot: UBP33_HUMAN, Q8TEY7
Function: Deubiquitinating enzyme involved in various processes such as cellular migration and beta-2 adrenergic
receptor/ADRB2 recycling. Involved in cell migration via its interaction with intracellular domain of ROBO1, leading
to regulate the Slit signaling. Plays a role in commissural axon guidance cross the ventral midline of the neural tube
in a Slit-dependent manner, possibly by mediating the deubiquitination of ROBO1. Acts as a regulator of G-protein
coupled receptor (GPCR) signaling by mediating the deubiquitination of beta-arrestins (ARRB1 and ARRB2) and beta-2
adrenergic receptor (ADRB2). Plays a central role in ADRB2 recycling and resensitization after prolonged agonist
stimulation by constitutively binding ADRB2, mediating deubiquitination of ADRB2 and inhibiting lysosomal trafficking
of ADRB2. Upon dissociation, it is probably transferred to the translocated beta-arrestins, leading to beta-arrestins
deubiquitination and disengagement from ADRB2. This suggests the existence of a dynamic exchange between the ADRB2 and
beta-arrestins. Deubiquitinates DIO2, thereby regulating thyroid hormone regulation. Mediates deubiquitination of both
'Lys-48'- and 'Lys-63'-linked polyubiquitin chains

Gene Wiki entry for USP33


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_032977.9  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the USP33 gene promoter:
         GR   AML1a   RelA   NF-E2 p45   NF-kappaB   HNF-1A   HNF-1   ZID   GR-alpha   NF-kappaB1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidUSP33 promoter sequence
   Search SABiosciences Chromatin IP Primers for USP33

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat USP33


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1p31.1   Ensembl cytogenetic band:  1p31.1   HGNC cytogenetic band: 1p31

USP33 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
USP33 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M078161:  view genomic region     (about GC identifiers)

Start:
78,161,672 bp from pter      End:
78,225,537 bp from pter
Size:
63,866 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UBP33_HUMAN, Q8TEY7 (See protein sequence)
Recommended Name: Ubiquitin carboxyl-terminal hydrolase 33  
Size: 942 amino acids; 106727 Da
Subunit: Interacts with VHL, leading to its ubiquitination and subsequent degradation. Interacts with ARRB1, ARRB2,
ADRB2, DIO2 and ROBO1. Interacts with SELENBP1; in a selenium-dependent manner
Subcellular location: Cytoplasm, perinuclear region. Note=According to PubMed:12865408, it localizes in the endoplasmic
reticulum; however the relevance of such result is unclear
Sequence caution: Sequence=BAA83049.1; Type=Erroneous initiation;
1 PDB 3D structure from and Proteopedia for USP33:
2UZG (3D)    
Secondary accessions: Q8TEY6 Q96AV6 Q9H9F0 Q9UPQ5
Alternative splicing: 3 isoforms:  Q8TEY7-1   Q8TEY7-2   Q8TEY7-3   

Explore the universe of human proteins at neXtProt for USP33: NX_Q8TEY7

Post-translational modifications:

  • Ubiquitinated via a VHL-dependent pathway for proteasomal degradation1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8TEY7

  • 2 DME Specific Peptides for USP33 (Q8TEY7)
     YSRYGGGP  QQDAQEFL 

    USP33 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_055832.3  NP_963918.1  NP_963920.1  

    ENSEMBL proteins: 
     ENSP00000359830   ENSP00000432392   ENSP00000359829   ENSP00000359828   ENSP00000432667  
     ENSP00000434441   ENSP00000433283   ENSP00000436441   ENSP00000350009  

    Human Recombinant Protein Products: 
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    Novus Biologicals USP33 Proteins
    Novus Biologicals USP33 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for USP33

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm TAS11739384
    GO:0030891VCB complex TAS11739384
    GO:0044297cell body IEA--
    GO:0048471perinuclear region of cytoplasm IEA--


    USP33 for ontologies           About GeneDecksing



    USP33 Antibody Products: 
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    Uscn Antibodies for USP33
    ThermoFisher Antibodies for USP33

    Assay Products for USP33: 
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    Uscn ELISAs and CLIAs for USP33


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    USP33 for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR006615 Pept_C19_DUSP
     IPR001394 Peptidase_C19
     IPR001607 Znf_UBP
     IPR018200 Pept_C19ubi-hydrolase_C_CS
     IPR013083 Znf_RING/FYVE/PHD

    Graphical View of Domain Structure for InterPro Entry Q8TEY7

    ProtoNet protein and cluster: Q8TEY7

    3 Blocks protein families:
    IPB001394 Ubiquitin thiolesterase
    IPB001607 Zn-finger in ubiquitin thiolesterase
    IPB006615 Ubiquitin-specific protease DUSP


    UniProtKB/Swiss-Prot: UBP33_HUMAN, Q8TEY7
    Domain: The UBP-type zinc finger binds 3 zinc ions. However, it does not bind ubiquitin, probably because the conserved
    Arg in position 86 is replaced by a Glu residue
    Similarity: Belongs to the peptidase C19 family. USP20/USP33 subfamily
    Similarity: Contains 2 DUSP domains
    Similarity: Contains 1 UBP-type zinc finger


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: UBP33_HUMAN, Q8TEY7
    Function: Deubiquitinating enzyme involved in various processes such as cellular migration and beta-2 adrenergic
    receptor/ADRB2 recycling. Involved in cell migration via its interaction with intracellular domain of ROBO1, leading
    to regulate the Slit signaling. Plays a role in commissural axon guidance cross the ventral midline of the neural tube
    in a Slit-dependent manner, possibly by mediating the deubiquitination of ROBO1. Acts as a regulator of G-protein
    coupled receptor (GPCR) signaling by mediating the deubiquitination of beta-arrestins (ARRB1 and ARRB2) and beta-2
    adrenergic receptor (ADRB2). Plays a central role in ADRB2 recycling and resensitization after prolonged agonist
    stimulation by constitutively binding ADRB2, mediating deubiquitination of ADRB2 and inhibiting lysosomal trafficking
    of ADRB2. Upon dissociation, it is probably transferred to the translocated beta-arrestins, leading to beta-arrestins
    deubiquitination and disengagement from ADRB2. This suggests the existence of a dynamic exchange between the ADRB2 and
    beta-arrestins. Deubiquitinates DIO2, thereby regulating thyroid hormone regulation. Mediates deubiquitination of both
    'Lys-48'- and 'Lys-63'-linked polyubiquitin chains
    Catalytic activity: Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the
    C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal)

    Enzyme Numbers (IUBMB): EC 3.1.2.152 EC 3.4.19.121

    miRNA
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    hsa-miR-4307 hsa-miR-4272 hsa-miR-301a hsa-miR-371-5p hsa-miR-890 hsa-miR-642b hsa-miR-130b hsa-miR-181b
    SwitchGear 3'UTR luciferase reporter plasmidUSP33 3' UTR sequence
    Inhib. RNA
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP33

    Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001664G-protein coupled receptor binding IPI19424180
    GO:0004197cysteine-type endopeptidase activity IMP19424180
    GO:0004221ubiquitin thiolesterase activity IDA19424180
    GO:0004843ubiquitin-specific protease activity TAS11739384
    GO:0005515protein binding IPI19118533


    USP33 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for USP33:
     Increased cell death HMECs cel 

    Animal Models:
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Usp33):
     homeostasis/metabolism 

    USP33 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ubiquitin-Proteasome Dependent Proteolysis
    Ubiquitin-Proteasome Dependent Proteolysis1.00

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for USP33
        Ubiquitin-Proteasome Dependent Proteolysis


    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for USP33

    STRING Interaction Network Preview (showing 5 interactants - click image to see 24)

    5/31 Interacting proteins for USP33 (Q8TEY71, 2, 3 ENSP000003500094) via UniProtKB, MINT, STRING, and/or I2D (see all 31)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ADRB2P075502, 3, ENSP000003053724MINT-7291631 MINT-7291604 I2D: score=1 STRING: ENSP00000305372
    SELENBP1Q132281, 3, ENSP000003578614EBI-719307,EBI-711619 I2D: score=2 STRING: ENSP00000357861
    VHLP403373, ENSP000002564744I2D: score=4 STRING: ENSP00000256474
    IFIT5Q133253, ENSP000003608604I2D: score=2 STRING: ENSP00000360860
    KRR1Q136013, ENSP000002292144I2D: score=2 STRING: ENSP00000229214
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006511ubiquitin-dependent protein catabolic process TAS11739384
    GO:0006897endocytosis IEA--
    GO:0007411axon guidance ISS--
    GO:0008277regulation of G-protein coupled receptor protein signaling pathway IMP19363159
    GO:0016477cell migration ISS--


    USP33 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for USP33

    1 HMDB Compound for USP33    About this table
    CompoundSynonyms CAS #PubMed Ids
    WaterDihydrogen oxide (see all 2)7732-18-5--
    Search CenterWatch for drugs/clinical trials and news about USP33 / UBP33 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for USP33 gene (3 alternative transcripts): 
    NM_015017.4  NM_201624.2  NM_201626.2  

    Unigene Cluster for USP33:

    Ubiquitin specific peptidase 33
    Hs.480597  [show with all ESTs]
    Unigene Representative Sequence: NM_015017
    18 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000370794(uc001dhs.3 uc001dhu.3) ENST00000481579 ENST00000370793(uc001dht.3)
    ENST00000533928 ENST00000477949 ENST00000370792(uc001dhv.3 uc001dhw.3)
    ENST00000527390 ENST00000472462 ENST00000498328 ENST00000461986 ENST00000531637
    ENST00000462192 ENST00000524536 ENST00000525113 ENST00000528150 ENST00000530709
    ENST00000524778 ENST00000357428

    miRNA
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    hsa-miR-4307 hsa-miR-4272 hsa-miR-301a hsa-miR-371-5p hsa-miR-890 hsa-miR-642b hsa-miR-130b hsa-miR-181b
    SwitchGear 3'UTR luciferase reporter plasmidUSP33 3' UTR sequence
    Inhib. RNA
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      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat USP33

    Additional cDNA sequence: 

    AB029020.1 AF383172.1 AF383173.1 AK022864.1 AK023664.1 AK094056.1 AK225499.1 AK308402.1 
    AL050140.1 BC016663.1 

    23 DOTS entries:

    DT.100668639  DT.86853063  DT.100797895  DT.100797892  DT.97859382  DT.95088481  DT.91749028  DT.100803718 
    DT.97859380  DT.75106382  DT.102832825  DT.40126884  DT.91970363  DT.97810520  DT.97859383  DT.100797894 
    DT.210202  DT.443634  DT.91666009  DT.91749024  DT.95088480  DT.95088510  DT.97784216 

    24/266 AceView cDNA sequences (see all 266):

    AU132896 CA428760 AA251528 AI638360 CA390419 CR619326 AF383173 AB029020 
    BE891829 AL705363 BP350325 AI572232 AW451188 CB132434 BM460265 AW594064 
    AW474844 NM_201624 AI262057 CA412581 AI422805 BU632737 AW516115 H27736 

    GeneLoc Exon Structure

    5/9 Alternative Splicing Database (ASD) splice patterns (SP) for USP33 (see all 9)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12a · 12b · 12c ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^
    SP1:              -     -                                                                                                                                       
    SP2:              -     -     -                                                                                                                                 
    SP3:                                                                                                                                                            
    SP4:                                                                                                                                                            
    SP5:              -     -     -                                                                                                                                 

    ExUns: 20
    SP1:      
    SP2:      
    SP3:      
    SP4:      
    SP5:      


    ECgene alternative splicing isoforms for USP33

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    USP33 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ATGGCTTTGT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See USP33 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for USP33

    SOURCE GeneReport for Unigene cluster: Hs.480597

    UniProtKB/Swiss-Prot: UBP33_HUMAN, Q8TEY7
    Tissue specificity: Widely expressed

        SABiosciences Custom PCR Arrays for USP33
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP33

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for USP33 gene from 6/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves USP331 ubiquitin specific peptidase 33 79(n)
    82.71(a)
      424553  XM_422389.2  XP_422389.2 
    lizard
    (Anolis carolinensis)
    Reptilia USP336
    --
    79(a)
    1 ↔ 1
    GL343194.1(4641880-4677312)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia AL883737.22   -- 80.73(n)    AL883737.2 
    zebrafish
    (Danio rerio)
    Actinopterygii usp331 ubiquitin specific peptidase 33 67.23(n)
    71.85(a)
      406508  NM_213227.1  NP_998392.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG84946
    --
    30(a)
    1 → many
    2R(10127442-10131167)
    worm
    (Caenorhabditis elegans)
    Secernentea T22F3.26
    Protein T22F3.2, isoform b
    17(a)
    possible ortholog
    V(3586637-3589004)


    ENSEMBL Gene Tree for USP33 (if available)
    TreeFam Gene Tree for USP33 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for USP33 gene
    USP32  USP442  USP162  USP452  USP512  USP222  USP492  USP202  
    12 SIMAP similar genes for USP33 using alignment to 6 protein entries:     UBP33_HUMAN (see all proteins):
    DKFZp586N041    LSFR3A    USP20    USP2    USP3    USP15
    USP48    USP11    USP17L13    USP36    USP44    DKFZp434K1822

    USP33 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/872 NCBI SNPs in USP33 are shown (see all 872    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1823966621,2
    --78161194(+) CAAAAC/TAGCAA 2 -- ds50010--------
    rs1869757381,2
    --78161230(+) ATAAAA/TATTAG 2 -- ds50010--------
    rs1439263151,2
    --78161388(+) ATGGTA/GAAACC 2 -- ds50010--------
    rs1930068601,2
    --78161516(+) GAGCCA/CAGACT 2 -- ds50010--------
    rs171009341,2
    C,F,H,--78161630(+) TTGCAC/ACTTTT 2 -- ds50018Minor allele frequency- A:0.04NA NS EA WA 680
    rs1473957931,2
    --78161794(+) ATCCAA/GTATGT 2 -- ut310--------
    rs1380405631,2
    --78161933(+) ATCAAC/TAATCG 2 -- ut310--------
    rs1833383791,2
    --78161938(+) CAATCA/GTAGTG 2 -- ut310--------
    rs413066371,2
    --78161998(+) CTCTAA/GGTTTT 2 -- ut311Minor allele frequency- G:0.01NA 120
    rs570752651,2
    C,F,--78162073(+) CGGCAA/GTAAGT 2 -- ut311Minor allele frequency- G:0.41EA 120

    HapMap Linkage Disequilibrium report for USP33 (78161672 - 78225537 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for USP33: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing USP33
    DNA2.0 Custom Variant and Variant Library Synthesis for USP33

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    USP33 for disorders           About GeneDecksing

    7 diseases for USP33:    About MalaCards
    acute lymphoblastic leukemia    lymphoblastic leukemia    osteoarthritis    leukemia
    breast cancer    thyroiditis    malaria

    Human Genome Epidemiology (HuGE) Navigator: USP33 (1 document)

    Export disorders for USP33 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for USP33 gene, integrated from 9 sources (see all 31):
    (articles sorted by number of sources associating them with USP33)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Ubiquitination of a novel deubiquitinating enzyme requires direct binding to von Hippel-Lindau tumor suppressor protein. (PubMed id 11739384)1, 2, 9 Li Z.... Wu G. (2002)
    2. Human selenium binding protein-1 (hSP56) interacts with VDU1 in a selenium-dependent manner. (PubMed id 19118533)1, 2, 9 Jeong J.Y.... Sytkowski A.J. (2009)
    3. Beta-arrestin-dependent signaling and trafficking of 7-transmembrane receptors is reciprocally regulated by the deubiquitinase USP33 and the E3 ligase Mdm2. (PubMed id 19363159)1, 2 Shenoy S.K.... Lefkowitz R.J. (2009)
    4. The deubiquitinases USP33 and USP20 coordinate beta2 adrenergic receptor recycling and resensitization. (PubMed id 19424180)1, 2 Berthouze M.... Shenoy S.K. (2009)
    5. The solution structure of the ZnF UBP domain of USP33/VDU1. (PubMed id 17766394)1, 2 Allen M.D. and Bycroft M. (2007)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    8. Deubiquitination of type 2 iodothyronine deiodinase by von Hippel- Lindau protein-interacting deubiquitinating enzymes regulates thyroid hormone activation. (PubMed id 12865408)1, 2 Curcio-Morelli C.... Bianco A.C. (2003)
    9. Human and mouse proteases: a comparative genomic approach. (PubMed id 12838346)1, 3 Puente X.S.... Lopez-Otin C. (2003)
    10. Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10470851)1, 2 Kikuno R....Ohara O. (1999)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 23032 HGNC: 20059 AceView: USP33 Ensembl:ENSG00000077254 euGenes: HUgn23032
    ECgene: USP33 H-InvDB: USP33

    (According to HUGE)
    About This Section
    HUGE: KIAA1097

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for USP33 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for USP33 gene:
    Search GeneIP for patents involving USP33

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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     Regulatory tfbs in USP33 promoter
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    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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