Free for academic non-profit institutions. Other users need a Commercial license

Aliases for USP30-AS1 Gene

Subcategory (RNA class) for USP30-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for USP30-AS1 Gene

  • USP30 Antisense RNA 1 2 3 5
  • USP30 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for USP30-AS1 Gene

Previous GeneCards Identifiers for USP30-AS1 Gene

  • GC12M109490

Summaries for USP30-AS1 Gene

GeneCards Summary for USP30-AS1 Gene

USP30-AS1 (USP30 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP30-AS1 Gene

Genomics for USP30-AS1 Gene

Regulatory Elements for USP30-AS1 Gene

Enhancers for USP30-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F109051 1.2 ENCODE 0.8 +0.5 472 3.1 PKNOX1 ARNT MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SART3 ALKBH2 ENSG00000256139 USP30 RNU4-32P UBE3B USP30-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around USP30-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for USP30-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for USP30-AS1 Gene

109,052,041 bp from pter
109,053,965 bp from pter
1,925 bases
Minus strand

Genomic View for USP30-AS1 Gene

Genes around USP30-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP30-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP30-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP30-AS1 Gene

Proteins for USP30-AS1 Gene

Post-translational modifications for USP30-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP30-AS1 Gene

Domains & Families for USP30-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for USP30-AS1 Gene

Function for USP30-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP30-AS1 Gene

Localization for USP30-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for USP30-AS1 Gene

Pathways & Interactions for USP30-AS1 Gene

SuperPathways for USP30-AS1 Gene

No Data Available

Interacting Proteins for USP30-AS1 Gene

Gene Ontology (GO) - Biological Process for USP30-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for USP30-AS1 Gene

Transcripts for USP30-AS1 Gene

mRNA/cDNA for USP30-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for USP30-AS1 Gene

USP30 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for USP30-AS1 Gene

No ASD Table

Relevant External Links for USP30-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for USP30-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for USP30-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for USP30-AS1 Gene

This gene is overexpressed in Liver (x5.6).

SOURCE GeneReport for Unigene cluster for USP30-AS1 Gene:

genes like me logo Genes that share expression patterns with USP30-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for USP30-AS1 Gene

Orthologs for USP30-AS1 Gene

Evolution for USP30-AS1 Gene

Gene Tree for USP30-AS1 (if available)
Gene Tree for USP30-AS1 (if available)

No data available for Orthologs for USP30-AS1 Gene

Paralogs for USP30-AS1 Gene

No data available for Paralogs for USP30-AS1 Gene

Variants for USP30-AS1 Gene

Sequence variations from dbSNP and Humsavar for USP30-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs10525667 -- 109,055,402(+) tatat(A/T)ttttt intron-variant, upstream-variant-2KB
rs11067385 -- 109,052,697(+) GGGCC(A/G)AGGCG intron-variant, nc-transcript-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs112406436 -- 109,054,529(+) GTCTC(-/A)CAAAA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs112525806 -- 109,053,496(+) GGGCT(C/T)CAGGC intron-variant, upstream-variant-2KB
rs113694239 -- 109,053,057(+) ATTCT(A/G)TCAGT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for USP30-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2422361 CNV duplication 17116639

Relevant External Links for USP30-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for USP30-AS1 Gene

Disorders for USP30-AS1 Gene

Relevant External Links for USP30-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for USP30-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for USP30-AS1 Gene

Publications for USP30-AS1 Gene

  1. Fine expression profiling of full-length transcripts using a size- unbiased cDNA library prepared with the vector-capping method. (PMID: 18487259) Oshikawa M. … Kato S. (DNA Res. 2008) 3 64

Products for USP30-AS1 Gene

Sources for USP30-AS1 Gene

Loading form....