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Aliases for USP27X-AS1 Gene

Subcategory (RNA class) for USP27X-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for USP27X-AS1 Gene

  • USP27X Antisense RNA 1 (Head To Head) 2 3 5

External Ids for USP27X-AS1 Gene

Previous GeneCards Identifiers for USP27X-AS1 Gene

  • GC0XM049643

Summaries for USP27X-AS1 Gene

GeneCards Summary for USP27X-AS1 Gene

USP27X-AS1 (USP27X Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP27X-AS1 Gene

Genomics for USP27X-AS1 Gene

Regulatory Elements for USP27X-AS1 Gene

Enhancers for USP27X-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around USP27X-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for USP27X-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for USP27X-AS1 Gene

49,876,724 bp from pter
49,879,356 bp from pter
2,633 bases
Minus strand

Genomic View for USP27X-AS1 Gene

Genes around USP27X-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP27X-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP27X-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP27X-AS1 Gene

Proteins for USP27X-AS1 Gene

Post-translational modifications for USP27X-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP27X-AS1 Gene

Domains & Families for USP27X-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for USP27X-AS1 Gene

Function for USP27X-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP27X-AS1 Gene

Localization for USP27X-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for USP27X-AS1 Gene

Pathways & Interactions for USP27X-AS1 Gene

SuperPathways for USP27X-AS1 Gene

No Data Available

Interacting Proteins for USP27X-AS1 Gene

Gene Ontology (GO) - Biological Process for USP27X-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for USP27X-AS1 Gene

Drugs & Compounds for USP27X-AS1 Gene

No Compound Related Data Available

Transcripts for USP27X-AS1 Gene

mRNA/cDNA for USP27X-AS1 Gene

(1) REFSEQ mRNAs :
(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP27X-AS1 Gene

No ASD Table

Relevant External Links for USP27X-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for USP27X-AS1 Gene

mRNA expression in normal human tissues for USP27X-AS1 Gene

genes like me logo Genes that share expression patterns with USP27X-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for USP27X-AS1 Gene

Orthologs for USP27X-AS1 Gene

Evolution for USP27X-AS1 Gene

Gene Tree for USP27X-AS1 (if available)
Gene Tree for USP27X-AS1 (if available)

No data available for Orthologs for USP27X-AS1 Gene

Paralogs for USP27X-AS1 Gene

No data available for Paralogs for USP27X-AS1 Gene

Variants for USP27X-AS1 Gene

Sequence variations from dbSNP and Humsavar for USP27X-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs6610109 -- 49,876,714(+) gtttc(A/T)ccgga downstream-variant-500B
rs34758655 -- 49,877,413(+) GGCCC(-/C)TCGGT nc-transcript-variant
rs138091275 -- 49,877,680(+) AGCAG(C/T)AGCAG nc-transcript-variant
rs180850724 -- 49,876,567(+) TTATT(A/G)AGACA downstream-variant-500B
rs181342985 -- 49,877,007(+) GAGCT(C/G)TCTCT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for USP27X-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv6902 CNV insertion 18451855

Relevant External Links for USP27X-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for USP27X-AS1 Gene

Disorders for USP27X-AS1 Gene

Relevant External Links for USP27X-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for USP27X-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for USP27X-AS1 Gene

Publications for USP27X-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 65
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for USP27X-AS1 Gene

Sources for USP27X-AS1 Gene

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