USP26 Gene
protein-coding GIFtS: 54
GCID: GC0XM132158
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|
ubiquitin specific peptidase 26(Previous name: ubiquitin specific protease 26 )
| |
Aliases
for USP26 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Ubiquitin Specific Peptidase 261 2 | | Ubiquitin Carboxyl-Terminal Hydrolase 262 | | Ubiquitin Specific Protease 261 2 | | Ubiquitin Thiolesterase 262 | | Deubiquitinating Enzyme 262 3 | | Ubiquitin-Specific Processing Protease 262 | | Ubiquitin Thioesterase 262 3 | | EC 3.4.19.123 | | Ubiquitin-Specific-Processing Protease 262 3 | | |
Export aliases for USP26 gene to outside databasesPrevious GC identifers: GC0XM126805 GC0XM129005 GC0XM130104 GC0XM130865 GC0XM131885 GC0XM131986 GC0XM121562 |
Summaries
for USP26 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for USP26:
This gene encodes a member of the ubiquitin-specific processing (UBP) family of proteases and is a deubiquitinatingenzyme (DUB) with His and Cys domains. It is specifically expressed in testis tissue. Mutations in this gene have beenassociated with Sertoli cell-only syndrome and male infertility. (provided by RefSeq, Jul 2008)
UniProtKB/Swiss-Prot: UBP26_HUMAN, Q9BXU7Function: Involved in the ubiquitin-dependent proteolytic pathway in conjunction with the 26S proteasome (Bysimilarity). Deubiquitinates the androgen receptor and regulates the androgen receptor signaling pathway
|
Genomic Views
for USP26 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000023.10 NC_018934.1 NT_011786.16
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the USP26 gene promoter:
ER-alpha FOXF2 Pax-2 FOXO3 CUTL1 Pax-2a FOXO3b Pax-2b FOXO3a FOXO1
Other transcription factors
Search SABiosciences Chromatin IP Primers for USP26
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat USP26 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: Xq26.2 Ensembl cytogenetic band: Xq26.2 HGNC cytogenetic band: Xq26.2USP26 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome X GeneLoc Exon Structure GeneLoc location for GC0XM132158: view genomic region
(about GC identifiers)
Start:
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132,158,659 bp from pter |
End:
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132,231,137 bp from pter |
Size:
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72,479 bases |
Orientation:
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minus strand |
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Proteins
for USP26 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: UBP26_HUMAN, Q9BXU7 (See
protein sequence)Recommended Name: Ubiquitin carboxyl-terminal hydrolase 26 Size: 913 amino acids; 104047 Da
Subunit: Interacts with AR
Subcellular location: Nucleus
Secondary accessions: B9WRT6 Q5H9H4Explore the universe of human proteins at neXtProt for USP26: NX_Q9BXU7
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q9BXU7
USP26 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_114113.1
ENSEMBL proteins: ENSP00000359869 ENSP00000423390 ENSP00000384360
Human Recombinant Protein Products:
Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005634 | nucleus |
IDA | -- |
USP26 for ontologies About GeneDecksing
USP26 Antibody Products:
Assay Products for USP26: |
Protein
Domains /
Families
for USP26 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
USP26 for domains About GeneDecksing
2 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q9BXU7ProtoNet protein and cluster: Q9BXU7 1 Blocks protein family: IPB001394 Ubiquitin thiolesterase
UniProtKB/Swiss-Prot: UBP26_HUMAN, Q9BXU7Similarity: Belongs to the peptidase C19 family |
Function
for USP26 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: UBP26_HUMAN, Q9BXU7Function: Involved in the ubiquitin-dependent proteolytic pathway in conjunction with the 26S proteasome (Bysimilarity). Deubiquitinates the androgen receptor and regulates the androgen receptor signaling pathwayCatalytic activity: Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by theC-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal)Enzyme Number (IUBMB): EC 3.4.19.121
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for USP26 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for USP26
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
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Synthesis Service for USP26 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP26 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP26 |
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0004221 | ubiquitin thiolesterase activity |
IEA | -- | | GO:0005515 | protein binding |
IPI | -- | | GO:0008234 | cysteine-type peptidase activity |
IEA | -- |
USP26 for ontologies About GeneDecksing
2 GenomeRNAi human phenotypes for USP26:
|
Pathways & Interactions
for USP26 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Ubiquitin-Proteasome Dependent Proteolysis | |
1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for USP26
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for USP26
STRING Interaction
Network Preview (showing 4 interactants - click image to see more details)
5 Interacting proteins for USP26 (Q9BXU73 ENSP000003598694) via UniProtKB, MINT, STRING, and/or I2DAbout this table
Gene Ontology (GO): 2 biological process terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
IEA | -- | | GO:0016579 | protein deubiquitination |
IDA | -- |
USP26 for ontologies About GeneDecksing
|
Drugs & Compounds
for USP26 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for USP26
1 HMDB Compound for USP26 About this table
| Compound | Synonyms |
CAS
# | PubMed Ids |
|---|
| Water | Dihydrogen oxide (see all 2) | 7732-18-5 | -- |
Search CenterWatch for drugs/clinical trials and news about USP26 / UBP26
|
Transcripts
for USP26 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for USP26 gene: NM_031907.1 Unigene Clusters for USP26: Ubiquitin specific peptidase 26 Hs.333137 , Hs.731249 [show with all ESTs]Unigene Representative Sequences: AF285593, AK2925274 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000370832(uc011mvf.2) ENST00000511190(uc010nrm.1) ENST00000417459
ENST00000406273
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for USP26 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for USP26
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: USP26 (NM_024025) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for USP26 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP26 |
Additional cDNA sequence: AK292527.1 BC069073.1 3 DOTS entries: DT.95302363 DT.99969062 DT.97765880 3 AceView cDNA sequences: NM_031907 AF285593 BC069073
GeneLoc Exon Structure
|
Expression
for USP26 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| USP26 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: CATAATGAGA
About this image
See USP26 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for USP26
SOURCE GeneReport for Unigene clusters: Hs.333137 Hs.731249
SABiosciences Custom PCR Arrays for USP26
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for USP26
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat USP26 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat USP26 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat USP26 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP26 |
Orthologs
for USP26 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of chordates.
Orthologs for USP26 gene from 3/17 species (see all 17) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
chicken
(Gallus gallus) |
Aves |
UBP37_CHICK6 |
Ubiquitin carboxyl-terminal hydrolase 37 |
38(a) |
1 → many |
7(24056297-24084766) |
lizard
(Anolis carolinensis) |
Reptilia |
-- |
-- |
37(a) |
1 → many |
1(88475056-88503520) |
zebrafish
(Danio rerio) |
Actinopterygii |
usp376si:ch211-165f21.46 |
si:ch211-165f21.4 |
33(a)30(a) |
1 ↔ manypossible ortholog |
9(700844-731786) 7(6411831-6414502) |
ENSEMBL Gene Tree for USP26 (if available)
TreeFam Gene Tree for USP26 (if available) |
Paralogs
for USP26 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for USP26 gene
- USP372 USP292
2 SIMAP similar genes for USP26 using alignment to 2 protein entries: UBP26_HUMAN (see all proteins):USP29 USP37
USP26 for paralogs About GeneDecksing
1 Pseudogenes.org Pseudogene for USP26
PGOHUM00000240704
|
Genomic Variants
for USP26 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr X pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for USP26 (132158659 - 132231137 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for USP26: --
Human Gene Mutation Database (HGMD): USP26
Locus Specific Mutation Databases (LSDB): USP26
| SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing USP26 |
|
Disorders
/ Diseases
for USP26 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Novoseek,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
USP26 for disorders About GeneDecksing
OMIM gene information: 300309
OMIM disorders: --
6  diseases for USP26: About MalaCardsmale infertility sertoli cell-only syndrome infertility azoospermia
hypogonadism conjunctivitis
2 diseases from the University of Copenhagen DISEASES database for USP26:Male infertility Infertility 2 Novoseek disease relationships for USP26 gene About this table
Genetic Association Database (GAD): USP26
Human Genome Epidemiology (HuGE) Navigator: USP26 (10 documents)
Export disorders for USP26 gene to outside databases
|
Publications
for USP26 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for USP26 gene, integrated from 9 sources (see all 22):
(articles sorted by number of sources associating them with USP26) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Novel mutations in testis-specific ubiquitin protease 26 gene may cause male infertility and hypogonadism. (PubMed id 15970005)1, 2, 4, 9 Paduch D.A....Schlegel P.N. (2005)
- USP26 gene variations in fertile and infertile men. (PubMed id 18927127)1, 2, 9 Ribarski I....Kleiman S.E. (2008)
- Possible role of USP26 in patients with severely impaired spermatogenesis. (PubMed id 15562280)1, 4, 9 Stouffs K....Liebaers I. (2005)
- Sequence analysis of the X-linked USP26 gene in severe male factor infertility patients and fertile controls. (PubMed id 18377898)1, 2, 9 Christensen G.L....Carrell D.T. (2008)
- The deubiquitinating enzyme USP26 is a regulator of androgen receptor signaling. (PubMed id 20501646)1, 2 Dirac A.M. and Bernards R. (2010)
- The DNA sequence of the human X chromosome. (PubMed id 15772651)1, 2 Ross M.T.... Bentley D.R. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Human and mouse proteases: a comparative genomic approach. (PubMed id 12838346)1, 3 Puente X.S.... Lopez-Otin C. (2003)
- An abundance of X-linked genes expressed in spermatogonia. (PubMed id 11279525)1, 2 Wang P.J.... Page D.C. (2001)
- Novel mutations in ubiquitin-specific protease 26 gene might cause spermatogenesis impairment and male infertility. (PubMed id 17968467)1, 9 Zhang J....Zhang Q.Y. (2007)
|
External Searches for USP26 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing USP26 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing USP26 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing USP26 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for USP26 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for USP26 gene:
Search GeneIP for patents involving USP26
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for USP26 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| |  |  |  |  | | | | |
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 | | | USP26 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP26 |
|  |  |  | | | | ThermoFisher Antibodies for USP26 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP26 |
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