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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

USP22 Gene

protein-coding   GIFtS: 55
GCID: GC17M020902

ubiquitin specific peptidase 22

(Previous names: ubiquitin specific protease 22, ubiquitin specific peptidase...)
(Previous symbol: USP3L)
 Explore 2 diseases affiliated with
USP22 via our new
 Human Malady Compendium 
Biological research products
for USP22
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ubiquitin Specific Peptidase 221 2     Ubiquitin Specific Peptidase 3-Like1
USP3L1 2 3     Ubiquitin Carboxyl-Terminal Hydrolase 222
Ubiquitin Specific Protease 221 2     Ubiquitin Thiolesterase 222
KIAA10631 3     Ubiquitin-Specific Processing Protease 222
Deubiquitinating Enzyme 222 3     EC 3.4.19.123
Ubiquitin Thioesterase 222 3     KIAA10645
Ubiquitin-Specific-Processing Protease 222 3     EC 3.1.2.158

External Ids:    HGNC: 126211   Entrez Gene: 233262   Ensembl: ENSG000001244227   OMIM: 6121165   UniProtKB: Q9UPT93   

Export aliases for USP22 gene to outside databases

Previous GC identifers: GC17P020956 GC17M022551 GC17M020808 GC17M021064 GC17M020843 GC17M020106


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: UBP22_HUMAN, Q9UPT9
Function: Histone deubiquitinating component of the transcription regulatory histone acetylation (HAT) complex SAGA.
Catalyzes the deubiquitination of both histones H2A and H2B, thereby acting as a coactivator. Recruited to specific
gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear
receptor-mediated transactivation and cell cycle progression




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010718.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the USP22 gene promoter:
         AP-2rep   Pax-5   ATF-2   LCR-F1   E47   YY1   AREB6   CREB   CRE-BP1   deltaCREB   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for USP22

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat USP22


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17p11.2   Ensembl cytogenetic band:  17p11.2   HGNC cytogenetic band: 17p11.2

USP22 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
USP22 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17M020902:  view genomic region     (about GC identifiers)

Start:
20,902,906 bp from pter      End:
20,947,073 bp from pter
Size:
44,168 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UBP22_HUMAN, Q9UPT9 (See protein sequence)
Recommended Name: Ubiquitin carboxyl-terminal hydrolase 22  
Size: 525 amino acids; 59961 Da
Subunit: Component of some SAGA transcription coactivator-HAT complexes, at least composed of ATXN7, ATXN7L3, ENY2,
GCN5L2, SUPT3H, TAF10, TRRAP and USP22. Within the SAGA complex, ATXN7L3, ENY2 and USP22 form a subcomplex required
for histone deubiquitination. Interacts directly with ATXN7L3; leading to its recritment to the SAGA complex
Subcellular location: Nucleus (Probable)
Sequence caution: Sequence=AAH25317.1; Type=Frameshift; Positions=355; Sequence=BAA83015.1; Type=Erroneous initiation;
Secondary accessions: A0JNS3 Q2NLE2 Q6MZY4 Q8TBS8 Q96IW5
Alternative splicing: 2 isoforms:  Q9UPT9-1   Q9UPT9-2   (Ref.2 (AAI10500) sequence differs from that shown due to a frameshift in position 3)

Explore the universe of human proteins at neXtProt for USP22: NX_Q9UPT9

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9UPT9

  • 4/19 DME Specific Peptides for USP22 (Q9UPT9) (see all 19)
     TIGLRGL  CVFFGCF  VSTTIDP  NLGNTCF 

    USP22 Protein expression data from MOPED and PaxDb:    About this image 
    USP22 Protein Expression
    REFSEQ proteins: NP_056091.1  
    ENSEMBL proteins: 
     ENSP00000261497   ENSP00000440950   ENSP00000464398   ENSP00000464499   ENSP00000468457  
     ENSP00000468748  

    Human Recombinant Protein Products for USP22: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: USP22
    OriGene Custom Protein Services for USP22 
    GenScript Custom Purified and Recombinant Proteins Services for USP22
    Novus Biologicals USP22 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for USP22

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000124SAGA complex IDA18206973
    GO:0070461colocalizes with SAGA-type complex IDA18838386

    USP22 for ontologies           About GeneDecksing



    USP22 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
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    OriGene Antibodies (see all 2): USP22
    OriGene Custom Antibody Services for USP22 
    GenScript Custom Superior Antibodies Services for USP22
    Novus Biologicals USP22 Antibodies
    Abcam antibodies for USP22 
    Uscn Antibodies for USP22
    ThermoFisher Antibodies for USP22

    Assay Products for USP22: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for USP22
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for USP22


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    USP22 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR001394 Peptidase_C19
     IPR001607 Znf_UBP
     IPR018200 Pept_C19ubi-hydrolase_C_CS
     IPR013083 Znf_RING/FYVE/PHD

    Graphical View of Domain Structure for InterPro Entry Q9UPT9

    ProtoNet protein and cluster: Q9UPT9

    2 Blocks protein families:
    IPB001394 Ubiquitin thiolesterase
    IPB001607 Zn-finger in ubiquitin thiolesterase


    UniProtKB/Swiss-Prot: UBP22_HUMAN, Q9UPT9
    Similarity: Belongs to the peptidase C19 family. UBP8 subfamily
    Similarity: Contains 1 UBP-type zinc finger


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: UBP22_HUMAN, Q9UPT9
    Function: Histone deubiquitinating component of the transcription regulatory histone acetylation (HAT) complex SAGA.
    Catalyzes the deubiquitination of both histones H2A and H2B, thereby acting as a coactivator. Recruited to specific
    gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear
    receptor-mediated transactivation and cell cycle progression
    Catalytic activity: Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the
    C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal)

         Enzyme Numbers (IUBMB): EC 3.1.2.152 EC 3.4.19.121

         Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003713transcription coactivator activity IDA18206972
    GO:0004221ubiquitin thiolesterase activity IEA--
    GO:0004843contributes to ubiquitin-specific protease activity IMP18206973
    GO:0005515protein binding IPI18206972
    GO:0008270zinc ion binding IEA--
         
    USP22 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for USP22:
     Decreased DCP1a protein expres 

         4 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Usp22):
     cellular  embryogenesis  growth/size  mortality/aging 

    USP22 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-out Usp22tm1Dfan for USP22
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for USP22 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: USP22
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat USP22
    8/9 QIAGEN miScript miRNA Assays for microRNAs that regulate USP22 (see all 9):
    hsa-miR-922 hsa-miR-4268 hsa-miR-513a-3p hsa-miR-3133 hsa-miR-3190 hsa-miR-1912 hsa-miR-4316 hsa-miR-4325
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for USP22 (see all 4)
    OriGene shRNA RFP: USP22
    OriGene siRNA: USP22
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat USP22
    Sirion Biotech Custom design and validation of potent shRNA sequences against USP22 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for USP22
    Sirion Biotech Customized adenovirus for overexpression of USP22 
    Sirion Biotech Customized adenovirus for potent knockdown of USP22

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for USP22 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for USP22 (see all 3)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: USP22 (NM_015276)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for USP22
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP22 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for USP22
    Search LifeMap BioReagents cell lines for USP22
    Sirion Biotech Customized stable knockdown cell line services for USP22 
    Sirion Biotech Customized inducible knockdown cell line services for USP22
    Sirion Biotech Customized stable overexpressing cell line services for USP22
    Sirion Biotech Customized inducible overexpressing cell line services for USP22

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP22


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for USP22

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/156 Interacting proteins for USP22 (Q9UPT92, 3 ENSP000002614974) via UniProtKB, MINT, STRING, and/or I2D (see all 156)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=1 
    HIST1H4BP628053I2D: score=1 
    HIST1H4CP628053I2D: score=1 
    HIST1H4DP628053I2D: score=1 
    HIST1H4EP628053I2D: score=1 
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006511ubiquitin-dependent protein catabolic process IEA--
    GO:0007049cell cycle IEA--
    GO:0009790embryo development NAS16378762
    GO:0016574histone ubiquitination IDA18469533

    USP22 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for USP22

    1 HMDB Compound for USP22    About this table
    CompoundSynonyms CAS #PubMed Ids
    WaterDihydrogen oxide (see all 2)7732-18-5--
    Search CenterWatch for drugs/clinical trials and news about USP22 / UBP22 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for USP22 gene: 
    NM_015276.1  

    Unigene Cluster for USP22:

    Ubiquitin specific peptidase 22
    Hs.462492  [show with all ESTs]
    Unigene Representative Sequence: AB028986
    11 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000261497(uc002gym.4) ENST00000537526(uc002gyn.4 uc002gyl.4)
    ENST00000455117 ENST00000579645 ENST00000463692 ENST00000478443 ENST00000582335
    ENST00000577610 ENST00000578446 ENST00000476111 ENST00000584538

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: USP22
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat USP22
    8/9 QIAGEN miScript miRNA Assays for microRNAs that regulate USP22 (see all 9):
    hsa-miR-922 hsa-miR-4268 hsa-miR-513a-3p hsa-miR-3133 hsa-miR-3190 hsa-miR-1912 hsa-miR-4316 hsa-miR-4325
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for USP22 (see all 4)
    OriGene shRNA RFP: USP22
    OriGene siRNA: USP22
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat USP22
    Sirion Biotech Custom design and validation of potent shRNA sequences against USP22 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for USP22 (see all 2)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for USP22 (see all 3)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: USP22 (NM_015276)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for USP22
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP22 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for USP22
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat USP22
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat USP22
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat USP22

    Additional cDNA sequence: 

    AB028986.1 AK025331.1 AK130677.1 AL049258.1 AL110213.1 BC007196.1 BC013364.2 BC025317.1 
    BC050994.1 BC084550.1 BC110499.1 BC126897.1 BC126898.1 BX640815.1 

    24/32 DOTS entries (see all 32):

    DT.100859449  DT.100661813  DT.40217429  DT.92459034  DT.100661806  DT.91694319  DT.92459044  DT.92459033 
    DT.97862469  DT.100661797  DT.121013189  DT.95275660  DT.100763760  DT.86844614  DT.97776493  DT.97777524 
    DT.100661807  DT.121013190  DT.121013197  DT.121013238  DT.121013385  DT.428942  DT.91654792  DT.91873243 

    24/891 AceView cDNA sequences (see all 891):

    BM992869 BQ226421 CF129237 BU734622 T09384 BG675938 BG680836 BQ222892 
    BU174127 AI570695 BQ672767 N73943 BI711250 BM451998 BQ642658 BM458984 
    AI127160 BU155590 BF993829 F09541 BE701537 CF528218 BM688372 AA349194 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    USP22 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCCTTTCCCT
    USP22 Expression
    About this image
    See USP22 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for USP22

    SOURCE GeneReport for Unigene cluster: Hs.462492

    UniProtKB/Swiss-Prot: UBP22_HUMAN, Q9UPT9
    Tissue specificity: Moderately expressed in various tissues including heart and skeletal muscle, and weakly expressed
    in lung and liver

        SABiosciences Expression via Pathway-Focused PCR Array including USP22: 
              Epigenetic Chromatin Modification Enzymes in human mouse rat

    Primer
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    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat USP22
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP22

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for USP22 gene from 8/27 species (see all 27)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves USP221 ubiquitin specific peptidase 22 83.37(n)
    96.18(a)
      416501  XM_414805.3  XP_414805.2 
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.254812 Xenopus laevis transcribed sequence with strong similarity more 78.94(n)    BU914152.1 
    zebrafish
    (Danio rerio)
    Actinopterygii usp221 ubiquitin specific peptidase 22 80.02(n)
    91.07(a)
      692275  NM_001045248.1  NP_001038713.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta not1 , 3 axon target recognition ubiquitin-specific
    protease3
    non-stop1
    54(a)3
    60.99(n)1
    57.66(a)1
      3 75D43
    400301  NM_079416.31  NP_524140.21 
    worm
    (Caenorhabditis elegans)
    Secernentea T22F3.26
    Protein T22F3.2, isoform b
    16(a)
    possible ortholog
    V(3586637-3589004)
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes UBP8(YMR223W)4
    UBP81
    Ubiquitin-specific protease that is a component of more4
    Ubp8p1
    45.51(n)1
    37.56(a)1
      13(716715-718130)4
    8552631, 4  NP_013950.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons UBP226
    ubiquitin carboxyl-terminal hydrolase 22
    32(a)
    1 → many
    5(3410539-3412633)
    rice
    (Oryza sativa)
    Liliopsida Os04g06473001 hypothetical protein 50(n)
    43.39(a)
      4337205  NM_001060605.2  NP_001054070.2 


    ENSEMBL Gene Tree for USP22 (if available)
    TreeFam Gene Tree for USP22 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for USP22 gene
    USP332  USP32  USP442  USP452  USP512  USP162  USP492  USP202  
    6 SIMAP similar genes for USP22 using alignment to 5 protein entries:     UBP22_HUMAN (see all proteins):
    DKFZp434K1822    USP27X    USP51    USP36    USP11    USP15

    USP22 for paralogs           About GeneDecksing


    3 Pseudogenes.org Pseudogenes for USP22
    PGOHUM00000232645 PGOHUM00000233154 PGOHUM00000241752


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/998 NCBI SNPs in USP22 are shown (see all 998    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs776086331,2
    F--20104781(+) GCAATC/TCAAGC 1 -- int11Minor allele frequency- T:0.07WA 118
    rs112043291,2
    C,F,A,H--20104901(+) AGCAGG/ACCACT 1 -- int19Minor allele frequency- A:0.14NS EA NA 650
    rs1117800121,2
    --20105422(+) CCCAGG/AGAGGC 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs1155755571,2
    C,F--20105503(+) GAGGCC/TGCCCA 1 -- int11Minor allele frequency- T:0.07WA 118
    rs1160449881,2
    C,F--20105575(+) ATGTGT/CCTTCC 1 -- int11Minor allele frequency- C:0.09WA 118
    rs1121184051,2
    --20106202(+) TTCATG/AAAGGC 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs1164924701,2
    C,F--20106303(+) GTGCGG/ATNNNN 1 -- int11Minor allele frequency- A:0.08WA 118
    rs1130890441,2
    --20106720(+) TAAGTG/ACAGAA 1 -- int11Minor allele frequency- A:0.50CSA 2
    rs124527571,2
    C,F,H--20106885(+) CCCAGC/TCAGCT 1 -- int15Minor allele frequency- T:0.00NS EA NA 428
    rs733017931,2
    C--20107298(+) GTGGAC/TAAATG 1 -- int12Minor allele frequency- T:0.09WA 120

    HapMap Linkage Disequilibrium report for USP22 (20902906 - 20947073 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for USP22
         2 CNVs: 8836 72832

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    USP22 for disorders           About GeneDecksing

    OMIM gene information: 612116    OMIM disorders: --

    2 diseases for USP22:    About MalaCards
    colorectal cancer    breast cancer


    Export disorders for USP22 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for USP22 gene, integrated from 9 sources (see all 37):
    (articles sorted by number of sources associating them with USP22)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A TFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing. (PubMed id 18206972)1, 2 Zhao Y.... Devys D. (2008)
    2. The putative cancer stem cell marker USP22 is a subunit of the human SAGA complex required for activated transcription and cell-cycle progression. (PubMed id 18206973)1, 2 Zhang X.Y....McMahon S.B. (2008)
    3. USP22, an hSAGA subunit and potential cancer stem cell marker, reverses the polycomb-catalyzed ubiquitylation of histone H2A. (PubMed id 18469533)1, 2 Zhang X.Y....McMahon S.B. (2008)
    4. The expression patterns of deubiquitinating enzymes, USP22 and Usp22. (PubMed id 16378762)1, 2 Lee H.J....Baek K.H. (2006)
    5. Human and mouse proteases: a comparative genomic approach. (PubMed id 12838346)1, 3 Puente X.S.... Lopez-Otin C. (2003)
    6. Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10470851)1, 2 Kikuno R....Ohara O. (1999)
    7. USP22 antagonizes p53 transcriptional activation by de ubiquitinating Sirt1 to suppress cell apoptosis and is required for mouse embryo nic development. (PubMed id 22542455)1 Lin Z....Fang D. (2012)
    8. USP22 is useful as a novel molecular marker for predic ting disease progression and patient prognosis of oral squamous cell carcinoma. (PubMed id 22880026)1 Piao S....Zhang B. (2012)
    9. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    10. USP22 nuclear expression is significantly associated w ith progression and unfavorable clinical outcome in human esophageal squamous ce ll carcinoma. (PubMed id 22447106)1 Li J....Li Y. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 23326 HGNC: 12621 AceView: USP22 Ensembl:ENSG00000124422 euGenes: HUgn23326
    ECgene: USP22 H-InvDB: USP22

    (According to HUGE)
    About This Section
    HUGE: KIAA1063 KIAA1064

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for USP22 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for USP22 gene:
    Search GeneIP for patents involving USP22

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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