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USP2-AS1 Gene(RNA Gene)

USP2 Antisense RNA 1 (Head To Head)

GCID:
GC11P119381
GIFtS:
11
Genes Participants
UDN Logo

Aliases for USP2-AS1 Gene

Subcategory (RNA class) for USP2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for USP2-AS1 Gene

  • USP2 Antisense RNA 1 (Head To Head) 2 3 5
  • THY1-AS1 3

External Ids for USP2-AS1 Gene

Previous GeneCards Identifiers for USP2-AS1 Gene

  • GC11P119255
  • GC11P119277

Summaries for USP2-AS1 Gene

GeneCards Summary for USP2-AS1 Gene

USP2-AS1 (USP2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP2-AS1 Gene

Genomics for USP2-AS1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for USP2-AS1 Gene


Promoters for USP2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around USP2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for USP2-AS1 Gene

Chromosome:
11
Start:
119,381,778 bp from pter
End:
119,526,664 bp from pter
Size:
144,887 bases
Orientation:
Plus strand

Genomic View for USP2-AS1 Gene

Genes around USP2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for USP2-AS1 Gene

Proteins for USP2-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for USP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP2-AS1 Gene

Domains & Families for USP2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for USP2-AS1 Gene

Function for USP2-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP2-AS1 Gene

Localization for USP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for USP2-AS1 Gene

Pathways & Interactions for USP2-AS1 Gene

SuperPathways for USP2-AS1 Gene

PathCards logoMore details on SuperPathways for USP2-AS1
No Data Available

Interacting Proteins for USP2-AS1 Gene

Gene Ontology (GO) - Biological Process for USP2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for USP2-AS1 Gene

Drugs & Compounds for USP2-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for USP2-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for USP2-AS1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for USP2-AS1 Gene

No ASD Table

Relevant External Links for USP2-AS1 Gene

GeneLoc Exon Structure for
USP2-AS1
ECgene alternative splicing isoforms for
USP2-AS1

Expression for USP2-AS1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for USP2-AS1 Gene

mRNA expression in normal human tissues for USP2-AS1 Gene
mRNA expression by GTEx for USP2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for USP2-AS1 Gene

This gene is overexpressed in Testis (x15.7).
genes like me logo Genes that share expression patterns with USP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for USP2-AS1 Gene

Orthologs for USP2-AS1 Gene

Evolution for USP2-AS1 Gene

ENSEMBL:
Gene Tree for USP2-AS1 (if available)
TreeFam:
Gene Tree for USP2-AS1 (if available)

No data available for Orthologs for USP2-AS1 Gene

Paralogs for USP2-AS1 Gene

No data available for Paralogs for USP2-AS1 Gene

Variants for USP2-AS1 Gene

Sequence variations from dbSNP and Humsavar for USP2-AS1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs521053 -- 119,491,439(+) TTTCA(C/T)GCAGG intron-variant
rs524080 -- 119,387,160(+) agaaa(A/T)ttggt intron-variant
rs531273 -- 119,483,044(-) GGTGA(C/T)GTCCG intron-variant
rs531280 -- 119,483,035(-) CGTCA(G/T)CATGC intron-variant
rs532150 -- 119,482,960(-) ATCCC(A/G)GTGGT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for USP2-AS1 Gene

Disorders for USP2-AS1 Gene

Relevant External Links for USP2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
USP2-AS1

No disorders were found for USP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for USP2-AS1 Gene

Publications for USP2-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67

Products for USP2-AS1 Gene

Sources for USP2-AS1 Gene

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