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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

USP18 Gene

protein-coding   GIFtS: 59
GCID: GC22P018632

ubiquitin specific peptidase 18

(Previous name: ubiquitin specific protease 18 )
 Explore 9 diseases affiliated with
USP18 via our new
 Human Malady Compendium 
Biological research products
for USP18
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ubiquitin Specific Peptidase 181 2     ISG15-Specific-Processing Protease2 3
ISG432 3 5     UBP432 5
Ubiquitin Specific Protease 181 2     Ubl Carboxyl-Terminal Hydrolase 182
Ubl Thioesterase 182 3     Ubl Thiolesterase 182
43 KDa ISG15-Specific Protease2 3     EC 3.4.19.-3
HUBP431     EC 3.1.2.158

External Ids:    HGNC: 126161   Entrez Gene: 112742   Ensembl: ENSG000001849797   OMIM: 6070575   UniProtKB: Q9UMW83   

Export aliases for USP18 gene to outside databases

Previous GC identifers: GC22P015573 GC22P017007 GC22P002445


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for USP18:
The protein encoded by this gene belongs to the ubiquitin-specific proteases (UBP) family of enzymes that cleave
ubiquitin from ubiquitinated protein substrates. It is highly expressed in liver and thymus, and is localized to the
nucleus. This protein efficiently cleaves only ISG15 (a ubiquitin-like protein) fusions, and deletion of this gene in
mice results in a massive increase of ISG15 conjugates in tissues, indicating that this protein is a major
ISG15-specific protease. Mice lacking this gene are also hypersensitive to interferon, suggesting a function of this
protein in downregulating interferon responses, independent of its isopeptidase activity towards ISG15. (provided by
RefSeq, Sep 2011)

UniProtKB/Swiss-Prot: UBP18_HUMAN, Q9UMW8
Function: Can efficiently cleave only ISG15 fusions including native ISG15 conjugates linked via isopeptide bonds.
Necessary to maintain a critical cellular balance of ISG15-conjugated proteins in both healthy and stressed organisms

Gene Wiki entry for USP18


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000022.10  NC_018933.1  NT_011519.10  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the USP18 gene promoter:
         STAT1   HTF   Pax-2   STAT1beta   Pax-2a   STAT1alpha   Pax-2b   POU2F1   HOXA5   POU2F1a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidUSP18 promoter sequence
   Search SABiosciences Chromatin IP Primers for USP18

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat USP18


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 22q11.21   Ensembl cytogenetic band:  22q11.21   HGNC cytogenetic band: 22q11.2

USP18 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
USP18 gene location

GeneLoc information about chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22P018632:  view genomic region     (about GC identifiers)

Start:
18,632,666 bp from pter      End:
18,660,164 bp from pter
Size:
27,499 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UBP18_HUMAN, Q9UMW8 (See protein sequence)
Recommended Name: Ubl carboxyl-terminal hydrolase 18  
Size: 372 amino acids; 43011 Da
Secondary accessions: Q6IAD9 Q9NY71

Explore the universe of human proteins at neXtProt for USP18: NX_Q9UMW8

3 DME Specific Peptides for USP18 (Q9UMW8)
 ILKRITVPR  VDGKWFCFNDS  LLLLEKMQDSRQKA 

USP18 Protein expression data from MOPED and PaxDb:    About this image 
Estimated protein expression log10 (pmol).

REFSEQ proteins: NP_059110.2  
ENSEMBL proteins: 
 ENSP00000215794  
Reactome Protein details: Q9UMW8
Human Recombinant Protein Products: 
Browse Purified and Recombinant Proteins at EMD Millipore
R&D Systems Recombinant & Natural Proteins for USP18 (UBP43/USP18)
Browse recombinant and purified proteins available from Enzo Life Sciences
Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
OriGene Protein Over-expression Lysate: USP18
OriGene Custom Protein Services for USP18 
GenScript Custom Purified and Recombinant Proteins Services for USP18
Novus Biologicals USP18 Proteins
Novus Biologicals USP18 Lysates
Browse Sino Biological Recombinant Proteins
Browse ProSpec Recombinant Proteins
Uscn Proteins for USP18

Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0005634nucleus IDA--
GO:0005829cytosol TAS--


USP18 for ontologies           About GeneDecksing



USP18 Antibody Products: 
EMD Millipore Mono- and Polyclonal Antibodies for the study of USP18
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Abcam antibodies for USP18 
Uscn Antibodies for USP18
Search ThermoFisher Antibodies for USP18

Assay Products for USP18: 
Browse Kits and Assays available from EMD Millipore
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GenScript Custom Assay Services for USP18
Browse Enzo Life Sciences for kits & assays
Uscn ELISAs and CLIAs for USP18


(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

USP18 for domains           About GeneDecksing

2 InterPro domains/families:
 IPR001394 Peptidase_C19
 IPR018200 Pept_C19ubi-hydrolase_C_CS

Graphical View of Domain Structure for InterPro Entry Q9UMW8

ProtoNet protein and cluster: Q9UMW8

1 Blocks protein family: IPB001394 Ubiquitin thiolesterase

UniProtKB/Swiss-Prot: UBP18_HUMAN, Q9UMW8
Similarity: Belongs to the peptidase C19 family


(According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

     UniProtKB/Swiss-Prot: UBP18_HUMAN, Q9UMW8
Function: Can efficiently cleave only ISG15 fusions including native ISG15 conjugates linked via isopeptide bonds.
Necessary to maintain a critical cellular balance of ISG15-conjugated proteins in both healthy and stressed organisms
Catalytic activity: Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the
C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal)

     Genatlas biochemistry entry for USP18:
ubiquitin specific protease 18,deubiquitin enzyme family

Enzyme Numbers (IUBMB): EC 3.1.2.152 EC 3.4.19.-1

miRNA
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OriGene 3'-UTR Clone: USP18
Browse MicroRNA Expression Plasmids
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat USP18
4 QIAGEN miScript miRNA Assays for microRNAs that regulate USP18:
hsa-miR-146a* hsa-miR-4279 hsa-miR-216b hsa-miR-340
SwitchGear 3'UTR luciferase reporter plasmidUSP18 3' UTR sequence
Inhib. RNA
Products:
    
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for USP18 (see all 7)
OriGene shRNA RFP: USP18
OriGene siRNA: USP18
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat USP18

Gene Editing
Products:
DNA2.0 Custom Protein Engineering Service for USP18

Clone
Products:
     
Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for USP18 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for USP18
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector: USP18 (NM_017414)
Browse Sino Biological Human cDNA Clones
DNA2.0 Custom Codon Optimized Gene Synthesis Service for USP18
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP18 

Cell Line
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Search LifeMap BioReagents cell lines for USP18

In Situ Assay
Products:
   

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP18

Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0004221ubiquitin thiolesterase activity IEA--
GO:0004843ubiquitin-specific protease activity TAS10777664


USP18 for ontologies           About GeneDecksing


Animal Models:
     8 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Usp18):
 behavior/neurological  cardiovascular system  cellular  hematopoietic system  homeostasis/metabolism 
 immune system  mortality/aging  nervous system 

USP18 for phenotypes           About GeneDecksing


(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
See pathways by source

Super-pathwaycontained gene-specific pathways
1Regulation of IFNA signaling
Regulation of IFNA signaling1.00
Immune response IFN alpha/beta signaling pathway0.71
Immune response_IFN alpha/beta signaling pathway0.71
2Cytokine Signaling in Immune system
Cytokine Signaling in Immune system1.00
Interferon Signaling0.61
3Translocation of Influenza A virus nonstructural protein 1 (NS1A) into the nucleus
ISG15 antiviral mechanism0.49
Antiviral mechanism by IFN-stimulated genes0.49
4Protein Stability
Protein Stability1.00
5Immune System
Immune System1.00

Pathway sources
See GeneCards unified pathways
Show all pathways

1 EMD Millipore Pathway for USP18
    Immune response IFN alpha/beta signaling pathway

1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for USP18
    Ubiquitin-Proteasome Dependent Proteolysis

1 Cell Signaling Technology (CST) Pathway for USP18
    Protein Stability

1 GeneGo (Thomson Reuters) Pathway for USP18
    Immune response IFN alpha/beta signaling pathway

5/8        Reactome Pathways for USP18 (see all 8)
    Regulation of IFNA signaling
Antiviral mechanism by IFN-stimulated genes
Interferon alpha/beta signaling
Cytokine Signaling in Immune system
Regulation of protein ISGylation by ISG15 deconjugating enzyme USP18



USP18 for pathways           About GeneDecksing

Interactions:

    Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for USP18

STRING Interaction Network Preview (showing 5 interactants - click image to see 8)

5/10 Interacting proteins for USP18 (Q9UMW82, 3 ENSP000002157944) via UniProtKB, MINT, STRING, and/or I2D (see all 10)
InteractantInteraction Details
GeneCardExternal ID(s)
IKBKGQ9Y6K92, 3MINT-48210 I2D: score=2 
IFNAR2P485512, 3, ENSP000003439574MINT-2729669 MINT-2729733 MINT-2729692 MINT-2729631 I2D: score=2 STRING: ENSP00000343957
ISG15P051612, 3, ENSP000003686994MINT-66847 I2D: score=5 STRING: ENSP00000368699
KDM3BQ7LBC63, ENSP000003265634I2D: score=2 STRING: ENSP00000326563
MYL6P606603, ENSP000002934224I2D: score=2 STRING: ENSP00000293422
About this table

Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

GO IDQualified GO termEvidencePubMed IDs
GO:0006511ubiquitin-dependent protein catabolic process IEA--
GO:0019221cytokine-mediated signaling pathway TAS--
GO:0060337type I interferon-mediated signaling pathway TAS--
GO:0060338regulation of type I interferon-mediated signaling pathway TAS--


USP18 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section
Browse Small Molecules at EMD Millipore
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for USP18
Search CenterWatch for drugs/clinical trials and news about USP18 / UBP18 

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for USP18 gene: 
NM_017414.3  

Unigene Cluster for USP18:

Ubiquitin specific peptidase 18
Hs.38260  [show with all ESTs]
Unigene Representative Sequence: NM_017414
1 Ensembl transcript including schematic representation, and UCSC links where relevant:
ENST00000215794(uc002zny.3)

miRNA
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OriGene 3'-UTR Clone: USP18
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QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat USP18
4 QIAGEN miScript miRNA Assays for microRNAs that regulate USP18:
hsa-miR-146a* hsa-miR-4279 hsa-miR-216b hsa-miR-340
SwitchGear 3'UTR luciferase reporter plasmidUSP18 3' UTR sequence
Inhib. RNA
Products:
     
Browse for Gene Knock-down Tools from EMD Millipore
OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for USP18 (see all 7)
OriGene shRNA RFP: USP18
OriGene siRNA: USP18
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat USP18
Clone
Products:
     
OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for USP18 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for USP18
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
GenScript: all cDNA clones in your preferred vector: USP18 (NM_017414)
DNA2.0 Custom Codon Optimized Gene Synthesis Service for USP18
Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat USP18 
Primer
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OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for USP18
Browse OriGene validated miRNA SYBR primer pairs
SABiosciences RT2 qPCR Primer Assay in human, mouse, rat USP18
  QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat USP18
  QIAGEN QuantiFast Probe-based Assays in human, mouse, rat USP18

Additional cDNA sequence: 

AF176642.2 AJ243526.1 AJ583822.1 AJ586979.1 AK303463.1 AK313385.1 AL136690.1 BC014896.1 
BT006835.1 CR457216.1 CT841507.1 

13 DOTS entries:

DT.100699062  DT.100775966  DT.120667954  DT.451675  DT.120642020  DT.120646499  DT.120668581  DT.100641117 
DT.91725649  DT.92422619  DT.102825674  DT.87046339  DT.95287161 

24/63 AceView cDNA sequences (see all 63):

CR604420 BQ213074 BC014896 BQ018510 BU616063 AI222587 CD364378 AI055870 
AA976038 NM_017414 AW136867 AA136383 AL136690 AI352180 BT006835 BF089771 
BX280356 AW172474 BU584005 CR457216 BX344048 BM807263 AF176642 BI752849 

GeneLoc Exon Structure

3 Alternative Splicing Database (ASD) splice patterns (SP) for USP18    About this scheme

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11
SP1:                    -                                                         
SP2:                                                                              
SP3:                                                                              


ECgene alternative splicing isoforms for USP18

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

USP18 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --

Microarray
RNAseq (Illumina Body Map)
(100×FPKM)½
SAGE (Serial Analysis of Gene Expression)

About this image
See USP18 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for USP18

SOURCE GeneReport for Unigene cluster: Hs.38260
    SABiosciences Custom PCR Arrays for USP18
Primer
Products:
OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for USP18
Browse OriGene validated miRNA SYBR primer pairs
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QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat USP18
QIAGEN QuantiFast Probe-based Assays in human, mouse, rat USP18
In Situ
Assay Products:
 

 
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for USP18

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals.

Orthologs for USP18 gene from 4/14 species (see all 14)    About this table
Organism Taxonomic
classification
Gene Description Human
Similarity
Orthology
Type
Details
chicken
(Gallus gallus)
Aves USP181 ubiquitin specific peptidase 18 60.87(n)
53.62(a)
  418167  XM_416398.2  XP_416398.2 
lizard
(Anolis carolinensis)
Reptilia --
--
55(a)
1 → many
5(14365848-14374457)
zebrafish
(Danio rerio)
Actinopterygii LOC1003345351 ubl carboxyl-terminal hydrolase 18-like 46.43(n)
33.87(a)
  100334535  XM_002661352.1  XP_002661398.1 
worm
(Caenorhabditis elegans)
Secernentea usp-486
--
5(a)
possible ortholog
I(9506545-9511177)


ENSEMBL Gene Tree for USP18 (if available)
TreeFam Gene Tree for USP18 (if available) 

(Paralogs according to 1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
Paralogs for USP18 gene
USP242  USP412  USP482  USP402  USP72  USP472  USP9Y2  USP342  
USP9X2  
2 SIMAP similar genes for USP18 using alignment to 1 protein entry:     UBP18_HUMAN:
USP41    Em

USP18 for paralogs           About GeneDecksing



(SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

10/538 NCBI SNPs in USP18 are shown (see all 538    About this table
Genomic DataTranscription Related DataAllele Frequencies
SNP IDValidClinical
significance
Chr 22 posSequence#AA
Chg
TypeMore#Allele
freq
PopTotal
sample
More
----------
rs1150840661,2
C,F,--18630760(+) TGGGCC/TGGGCT 1 -- us2k11Minor allele frequency- T:0.14WA 118
rs1392963341,2
--18630762(+) GGCCGA/GGCTGC 1 -- us2k10--------
rs1848757691,2
--18630766(+) GGGCTA/GCACCA 1 -- us2k10--------
rs1880041011,2
--18630781(+) CCATTC/TGTGTC 1 -- us2k10--------
rs622295031,2
--18630802(+) CTGGGC/AAGCCC 1 -- us2k14Minor allele frequency- A:0.06NA CSA WA 241
rs1168468771,2
--18630924(+) CGGAAT/GTGTTC 1 -- us2k11Minor allele frequency- G:0.01NA 120
rs1443330511,2
--18630949(+) AAGGAC/TGGAAG 1 -- us2k10--------
rs1925742311,2
--18630965(+) GCCCCA/GTAGAA 1 -- us2k10--------
rs1510576691,2
--18630977(+) TGTAAC/TGGATC 1 -- us2k10--------
rs1409471681,2
--18631004(+) CAGCCA/TCCAAC 1 -- us2k10--------

HapMap Linkage Disequilibrium report for USP18 (18632666 - 18660164 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 14 variations for USP18
     14 CNVs: 3237 73705 79445 31070 90878 2258 34485 34618 8900 4116 9330 0814 73706 7331

SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing USP18
DNA2.0 Custom Variant and Variant Library Synthesis for USP18

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

USP18 for disorders           About GeneDecksing

OMIM gene information: 607057    OMIM disorders: --

9 diseases for USP18:    About MalaCards
lymphocytic choriomeningitis    digeorge syndrome    burkitt's lymphoma    hepatitis c
hepatitis b    hepatitis    lung cancer    melanoma
malaria


Export disorders for USP18 gene to outside databases

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
About This Section

PubMed articles for USP18 gene, integrated from 9 sources (see all 40):
(articles sorted by number of sources associating them with USP18)
    Utopia: connect your pdf to the dynamic
world of online information

  1. Cloning and characterization of a novel human ubiquitin-specific protease, a homologue of murine UBP43 (Usp18). (PubMed id 10777664)1, 2, 9 Schwer H.... Hetherington C.J. (2000)
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
  3. Human and mouse proteases: a comparative genomic approach. (PubMed id 12838346)1, 3 Puente X.S.... Lopez-Otin C. (2003)
  4. UBP43 (USP18) specifically removes ISG15 from conjugated proteins. (PubMed id 11788588)1, 2 Malakhov M.P.... Zhang D.-E. (2002)
  5. Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. (PubMed id 11230166)1, 2 Wiemann S.... Poustka A. (2001)
  6. RNase-L-dependent destabilization of interferon-induced mRNAs. A role for the 2-5A system in attenuation of the interferon response. (PubMed id 10722734)1, 9 Li X.L....Hassel B.A. (2000)
  7. A microarray of ubiquitylated proteins for profiling d eubiquitylase activity reveals the critical roles of both chain and substrate. (PubMed id 22626734)1 Loch C.M. and Strickler J.E. (2012)
  8. Interferon-g-stimulated genes, but not USP18, are expressed in livers of patients with acute hepatitis C. (PubMed id 22677194)1 Dill M.T....Heim M.H. (2012)
  9. Evidence for the ubiquitin protease UBP43 as an antine oplastic target. (PubMed id 22752428)1 Guo Y....Dmitrovsky E. (2012)
  10. USP18 establishes the transcriptional and anti-prolife rative interferon a/b differential. (PubMed id 22731491)1 Francois-Newton V....Pellegrini S. (2012)

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(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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Entrez Gene: 11274 HGNC: 12616 AceView: USP18 Ensembl:ENSG00000184979 euGenes: HUgn11274
ECgene: USP18 H-InvDB: USP18

(According to HUGE)
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(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
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PharmGKB entry for USP18 Pharmacogenomics, SNPs, Pathways

(Patent information from GeneIP,
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