Free for academic non-profit institutions. Other users need a Commercial license

Aliases for USP17L9P Gene

Aliases for USP17L9P Gene

  • Ubiquitin Specific Peptidase 17-Like Family Member 9, Pseudogene 2 3
  • Ubiquitin Specific Peptidase 17 2 3
  • USP17 3 6
  • Ubiquitin-Specific-Processing Protease 17 3
  • Ubiquitin Carboxyl-Terminal Hydrolase 17 3
  • Ubiquitin Specific Protease 17 3
  • Deubiquitinating Enzyme 17 3
  • Ubiquitin Thiolesterase 17 3
  • Ubiquitin Thioesterase 17 3
  • USP17H 3
  • USP17I 3
  • USP17J 3
  • USP17K 3
  • USP17L 3
  • USP17M 3
  • USP17A 3
  • RS447 3

External Ids for USP17L9P Gene

Previous Symbols for USP17L9P Gene

  • USP17

Summaries for USP17L9P Gene

GeneCards Summary for USP17L9P Gene

USP17L9P (Ubiquitin Specific Peptidase 17-Like Family Member 9, Pseudogene) is a Pseudogene. Among its related pathways are Ubiquitin-Proteasome Dependent Proteolysis. GO annotations related to this gene include ubiquitin thiolesterase activity and cysteine-type peptidase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP17L9P Gene

Genomics for USP17L9P Gene

Genomic Location for USP17L9P Gene

Start:
9,358,382 bp from pter
End:
9,359,975 bp from pter
Size:
1,594 bases
Orientation:
Plus strand

Genomic View for USP17L9P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for USP17L9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP17L9P Gene

No data available for Regulatory Elements for USP17L9P Gene

Proteins for USP17L9P Gene

Post-translational modifications for USP17L9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP17L9P Gene

Domains for USP17L9P Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for USP17L9P Gene

Function for USP17L9P Gene

Gene Ontology (GO) - Molecular Function for USP17L9P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008234 cysteine-type peptidase activity IEA --
GO:0036459 ubiquitinyl hydrolase activity IEA --
genes like me logo Genes that share ontologies with USP17L9P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for USP17L9P Gene

Localization for USP17L9P Gene

Gene Ontology (GO) - Cellular Components for USP17L9P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
GO:0005783 endoplasmic reticulum IEA --
genes like me logo Genes that share ontologies with USP17L9P: view

Pathways for USP17L9P Gene

genes like me logo Genes that share pathways with USP17L9P: view

Pathways by source for USP17L9P Gene

1 Qiagen pathway for USP17L9P Gene

Interacting Proteins for USP17L9P Gene

Gene Ontology (GO) - Biological Process for USP17L9P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006511 ubiquitin-dependent protein catabolic process IEA --
GO:0006915 apoptotic process IEA --
genes like me logo Genes that share ontologies with USP17L9P: view

Transcripts for USP17L9P Gene

mRNA/cDNA for USP17L9P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP17L9P Gene

No ASD Table

Relevant External Links for USP17L9P Gene

GeneLoc Exon Structure for
USP17L9P
ECgene alternative splicing isoforms for
USP17L9P

Expression for USP17L9P Gene

mRNA expression in normal human tissues for USP17L9P Gene

SOURCE GeneReport for Unigene cluster for USP17L9P Gene Hs.553810

genes like me logo Genes that share expressions with USP17L9P: view

Orthologs for USP17L9P Gene

Evolution for USP17L9P Gene

ENSEMBL:
Gene Tree for USP17L9P (if available)
TreeFam:
Gene Tree for USP17L9P (if available)

No data available for Orthologs for USP17L9P Gene

Paralogs for USP17L9P Gene

No data available for Paralogs for USP17L9P Gene

Variants for USP17L9P Gene

Sequence variations from dbSNP and Humsavar for USP17L9P Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs62411732 -- 9,359,473(+) CCTGA(C/G)TCAAC nc-transcript-variant
rs113019429 -- 9,358,452(+) CTTCT(C/G)GGCCC nc-transcript-variant
rs113120428 -- 9,360,259(+) GTGTT(C/T)GTGTT downstream-variant-500B
rs113320375 -- 9,360,274(+) ATAGG(C/T)GACAT downstream-variant-500B
rs137900875 -- 9,359,724(+) CGAAG(C/T)CTGAG nc-transcript-variant

Relevant External Links for USP17L9P Gene

HapMap Linkage Disequilibrium report
USP17L9P

No data available for Structural Variations from Database of Genomic Variants (DGV) for USP17L9P Gene

Disorders for USP17L9P Gene

No disorders were found for USP17L9P Gene.

No data available for UniProtKB/Swiss-Prot for USP17L9P Gene

Publications for USP17L9P Gene

  1. Human and mouse proteases: a comparative genomic approach. (PMID: 12838346) Puente X.S. … Lopez-Otin C. (Nat. Rev. Genet. 2003) 2 3
  2. The RS447 human megasatellite tandem repetitive sequence encodes a novel deubiquitinating enzyme with a functional promoter. (PMID: 10936051) Saitoh Y. … Ikeda J.-E. (Genomics 2000) 3 23
  3. Unstable transmission of the RS447 human megasatellite tandem repetitive sequence that contains the USP17 deubiquitinating enzyme gene. (PMID: 11941478) Okada T. … Ikeda J.E. (Hum. Genet. 2002) 3 23
  4. A novel tandem repeat sequence located on human chromosome 4p: isolation and characterization. (PMID: 9192848) Kogi M. … Ikeda J.E. (Genomics 1997) 3
  5. Human megasatellite DNA RS447: copy-number polymorphisms and interspecies conservation. (PMID: 9806828) Gondo Y. … Ikeda J.E. (Genomics 1998) 3

Products for USP17L9P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate USP17L9P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for USP17L9P
    • Block miRNA regulation of USP17L9P using miScript Target Protectors

    Sources for USP17L9P Gene

    Back to Top

    Content