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Aliases for USP17L9P Gene

Aliases for USP17L9P Gene

  • Ubiquitin Specific Peptidase 17-Like Family Member 9, Pseudogene 2 3 5
  • Ubiquitin Specific Peptidase 17 2 3
  • Ubiquitin-Specific-Processing Protease 17 3
  • Ubiquitin Carboxyl-Terminal Hydrolase 17 3
  • Ubiquitin Specific Protease 17 3
  • Deubiquitinating Enzyme 17 3
  • Ubiquitin Thiolesterase 17 3
  • Ubiquitin Thioesterase 17 3
  • USP17L 3
  • USP17H 3
  • USP17I 3
  • USP17J 3
  • USP17K 3
  • USP17M 3
  • USP17A 3
  • USP17 3
  • RS447 3

External Ids for USP17L9P Gene

Previous HGNC Symbols for USP17L9P Gene

  • USP17

Summaries for USP17L9P Gene

GeneCards Summary for USP17L9P Gene

USP17L9P (Ubiquitin Specific Peptidase 17-Like Family Member 9, Pseudogene) is a Pseudogene. Among its related pathways are Ubiquitin-Proteasome Dependent Proteolysis. GO annotations related to this gene include cysteine-type peptidase activity and thiol-dependent ubiquitinyl hydrolase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP17L9P Gene

Genomics for USP17L9P Gene

Genomic Location for USP17L9P Gene

Chromosome:
4
Start:
9,358,382 bp from pter
End:
9,359,975 bp from pter
Size:
1,594 bases
Orientation:
Plus strand

Genomic View for USP17L9P Gene

Genes around USP17L9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP17L9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP17L9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP17L9P Gene

No data available for Regulatory Elements for USP17L9P Gene

Proteins for USP17L9P Gene

Post-translational modifications for USP17L9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP17L9P Gene

Domains & Families for USP17L9P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for USP17L9P Gene

Function for USP17L9P Gene

Gene Ontology (GO) - Molecular Function for USP17L9P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA --
genes like me logo Genes that share ontologies with USP17L9P: view

Phenotypes for USP17L9P Gene

GenomeRNAi human phenotypes for USP17L9P:
genes like me logo Genes that share phenotypes with USP17L9P: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP17L9P Gene

Localization for USP17L9P Gene

Gene Ontology (GO) - Cellular Components for USP17L9P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
GO:0005730 nucleolus IEA --
GO:0005783 endoplasmic reticulum IEA --
genes like me logo Genes that share ontologies with USP17L9P: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for USP17L9P Gene

Pathways & Interactions for USP17L9P Gene

genes like me logo Genes that share pathways with USP17L9P: view

Pathways by source for USP17L9P Gene

1 Qiagen pathway for USP17L9P Gene

Interacting Proteins for USP17L9P Gene

Gene Ontology (GO) - Biological Process for USP17L9P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006511 ubiquitin-dependent protein catabolic process IEA --
GO:0006915 apoptotic process IEA --
GO:0016579 protein deubiquitination IEA --
genes like me logo Genes that share ontologies with USP17L9P: view

No data available for SIGNOR curated interactions for USP17L9P Gene

Drugs & Compounds for USP17L9P Gene

(1) Drugs for USP17L9P Gene - From: HMDB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Hyaluronic acid Approved, Vet_approved Pharma 439
genes like me logo Genes that share compounds with USP17L9P: view

Transcripts for USP17L9P Gene

mRNA/cDNA for USP17L9P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for USP17L9P Gene

No ASD Table

Relevant External Links for USP17L9P Gene

GeneLoc Exon Structure for
USP17L9P
ECgene alternative splicing isoforms for
USP17L9P

Expression for USP17L9P Gene

mRNA expression in normal human tissues for USP17L9P Gene

NURSA nuclear receptor signaling pathways regulating expression of USP17L9P Gene:

USP17L9P

SOURCE GeneReport for Unigene cluster for USP17L9P Gene:

Hs.553810
genes like me logo Genes that share expression patterns with USP17L9P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for USP17L9P Gene

Orthologs for USP17L9P Gene

Evolution for USP17L9P Gene

ENSEMBL:
Gene Tree for USP17L9P (if available)
TreeFam:
Gene Tree for USP17L9P (if available)

No data available for Orthologs for USP17L9P Gene

Paralogs for USP17L9P Gene

No data available for Paralogs for USP17L9P Gene

Variants for USP17L9P Gene

Sequence variations from dbSNP and Humsavar for USP17L9P Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs113019429 -- 9,358,452(+) CTTCT(C/G)GGCCC nc-transcript-variant
rs113120428 -- 9,360,259(+) GTGTT(C/T)GTGTT downstream-variant-500B
rs113320375 -- 9,360,274(+) ATAGG(C/T)GACAT downstream-variant-500B
rs137900875 -- 9,359,724(+) CGAAG(C/T)CTGAG nc-transcript-variant
rs138225827 -- 9,360,132(+) CCCAA(C/G)TTTCT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for USP17L9P Gene

Variant ID Type Subtype PubMed ID
dgv2934e59 CNV duplication 20981092
dgv922e199 CNV deletion 23128226
esv1010945 CNV gain 20482838
esv22777 CNV gain+loss 19812545
esv2678198 CNV deletion 23128226
esv2727131 CNV deletion 23290073
esv2759222 CNV gain+loss 17122850
esv2763860 CNV gain+loss 21179565
esv34196 OTHER inversion 12058347
nsv1005698 CNV gain 25217958
nsv1076558 CNV duplication 25765185
nsv1124887 CNV duplication 24896259
nsv1132583 CNV duplication 24896259
nsv1152995 CNV duplication 26484159
nsv4227 CNV deletion 18451855
nsv428437 CNV gain 18775914
nsv469637 CNV loss 16826518
nsv471623 CNV gain+loss 15918152
nsv515017 CNV gain 21397061
nsv980182 CNV duplication 23825009

Relevant External Links for USP17L9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
USP17L9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for USP17L9P Gene

Disorders for USP17L9P Gene

Relevant External Links for USP17L9P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
USP17L9P

No disorders were found for USP17L9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for USP17L9P Gene

Publications for USP17L9P Gene

  1. Human and mouse proteases: a comparative genomic approach. (PMID: 12838346) Puente X.S. … Lopez-Otin C. (Nat. Rev. Genet. 2003) 2 3 64
  2. Unstable transmission of the RS447 human megasatellite tandem repetitive sequence that contains the USP17 deubiquitinating enzyme gene. (PMID: 11941478) Okada T. … Ikeda J.E. (Hum. Genet. 2002) 3 22 64
  3. The RS447 human megasatellite tandem repetitive sequence encodes a novel deubiquitinating enzyme with a functional promoter. (PMID: 10936051) Saitoh Y. … Ikeda J.-E. (Genomics 2000) 3 22 64
  4. The Deubiquitinase USP17 Regulates the Stability and Nuclear Function of IL-33. (PMID: 26610488) Ni Y. … Li B. (Int J Mol Sci 2015) 3 64
  5. A novel RCE1 isoform is required for H-Ras plasma membrane localization and is regulated by USP17. (PMID: 24134311) Jaworski J. … Burrows J.F. (Biochem. J. 2014) 3 64

Products for USP17L9P Gene

Sources for USP17L9P Gene

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