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Aliases for USP17L7 Gene

Aliases for USP17L7 Gene

  • Ubiquitin Specific Peptidase 17-Like Family Member 7 2 3 5
  • Ubiquitin Specific Peptidase 17-Like 7 2
  • EC 3.1.2.15 61

External Ids for USP17L7 Gene

Previous GeneCards Identifiers for USP17L7 Gene

  • GC08M012030
  • GC08M011990

Summaries for USP17L7 Gene

GeneCards Summary for USP17L7 Gene

USP17L7 (Ubiquitin Specific Peptidase 17-Like Family Member 7) is a Protein Coding gene. GO annotations related to this gene include thiol-dependent ubiquitinyl hydrolase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP17L7 Gene

Genomics for USP17L7 Gene

Regulatory Elements for USP17L7 Gene


Genomic Location for USP17L7 Gene

Chromosome:
8
Start:
12,132,417 bp from pter
End:
12,134,444 bp from pter
Size:
2,028 bases
Orientation:
Minus strand

Genomic View for USP17L7 Gene

Genes around USP17L7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP17L7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP17L7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP17L7 Gene

Proteins for USP17L7 Gene

  • Protein details for USP17L7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7H9-U17L7_HUMAN
    Recommended name:
    Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
    Protein Accession:
    P0C7H9

    Protein attributes for USP17L7 Gene

    Size:
    530 amino acids
    Molecular mass:
    59751 Da
    Quaternary structure:
    No Data Available

neXtProt entry for USP17L7 Gene

Selected DME Specific Peptides for USP17L7 Gene

P0C7H9:
  • AQSVKQAL
  • SDTFDPYLDI
  • VYVLYAVLVH
  • SVLSQQAYVLFYI
  • LVERATQESTLDHWKF
  • CTMQAHIT

Post-translational modifications for USP17L7 Gene

No Post-translational modifications

Other Protein References for USP17L7 Gene

ENSEMBL proteins:
REFSEQ proteins:

Domains & Families for USP17L7 Gene

Protein Domains for USP17L7 Gene

Suggested Antigen Peptide Sequences for USP17L7 Gene

Graphical View of Domain Structure for InterPro Entry

P0C7H9

UniProtKB/Swiss-Prot:

U17L7_HUMAN :
  • Contains 1 USP domain.
  • Belongs to the peptidase C19 family. USP17 subfamily.
Domain:
  • Contains 1 USP domain.
Family:
  • Belongs to the peptidase C19 family. USP17 subfamily.
genes like me logo Genes that share domains with USP17L7: view

No data available for Gene Families for USP17L7 Gene

Function for USP17L7 Gene

Enzyme Numbers (IUBMB) for USP17L7 Gene

Gene Ontology (GO) - Molecular Function for USP17L7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA --
genes like me logo Genes that share ontologies with USP17L7: view

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP17L7 Gene

Localization for USP17L7 Gene

Subcellular locations from UniProtKB/Swiss-Prot for USP17L7 Gene

Nucleus. Endoplasmic reticulum.

Gene Ontology (GO) - Cellular Components for USP17L7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
GO:0005783 endoplasmic reticulum IEA --
genes like me logo Genes that share ontologies with USP17L7: view

No data available for Subcellular locations from COMPARTMENTS for USP17L7 Gene

Pathways & Interactions for USP17L7 Gene

SuperPathways for USP17L7 Gene

No Data Available

Interacting Proteins for USP17L7 Gene

Selected Interacting proteins: P0C7H9-U17L7_HUMAN for USP17L7 Gene via IID

Gene Ontology (GO) - Biological Process for USP17L7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006511 ubiquitin-dependent protein catabolic process IEA --
GO:0016579 protein deubiquitination IEA --
genes like me logo Genes that share ontologies with USP17L7: view

No data available for Pathways by source and SIGNOR curated interactions for USP17L7 Gene

Transcripts for USP17L7 Gene

mRNA/cDNA for USP17L7 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP17L7 Gene

No ASD Table

Relevant External Links for USP17L7 Gene

GeneLoc Exon Structure for
USP17L7
ECgene alternative splicing isoforms for
USP17L7

Expression for USP17L7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for USP17L7 Gene

NURSA nuclear receptor signaling pathways regulating expression of USP17L7 Gene:

USP17L7

SOURCE GeneReport for Unigene cluster for USP17L7 Gene:

Hs.741132
genes like me logo Genes that share expression patterns with USP17L7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for USP17L7 Gene

Orthologs for USP17L7 Gene

Evolution for USP17L7 Gene

ENSEMBL:
Gene Tree for USP17L7 (if available)
TreeFam:
Gene Tree for USP17L7 (if available)

No data available for Orthologs for USP17L7 Gene

Paralogs for USP17L7 Gene

Pseudogenes.org Pseudogenes for USP17L7 Gene

genes like me logo Genes that share paralogs with USP17L7: view

No data available for Paralogs for USP17L7 Gene

Variants for USP17L7 Gene

Sequence variations from dbSNP and Humsavar for USP17L7 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs111280009 -- 12,134,744(+) GAGAA(C/G)AAGAC intron-variant, upstream-variant-2KB
rs111711022 -- 12,134,878(+) GAAAT(C/T)ATGCA intron-variant, upstream-variant-2KB
rs112027963 -- 12,134,551(+) AGCGA(C/T)GGAAG intron-variant, upstream-variant-2KB
rs112191142 -- 12,135,631(+) TCTGG(C/G)TGTAA intron-variant, upstream-variant-2KB
rs112608396 -- 12,134,370(+) CTTAT(A/T)TTAGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for USP17L7 Gene

Variant ID Type Subtype PubMed ID
nsv967564 CNV duplication 23825009
nsv951104 CNV deletion 24416366
nsv8288 CNV gain+loss 18304495
nsv610309 CNV loss 21841781
nsv610297 CNV gain 21841781
nsv516685 CNV gain+loss 19592680
nsv442420 CNV gain+loss 18776908
nsv428195 CNV gain 18775914
nsv1161718 OTHER complex 26073780
nsv1139930 CNV duplication 24896259
nsv1110510 CNV duplication 24896259
nsv1077517 CNV duplication 25765185
nsv1034132 CNV gain 25217958
esv3584578 CNV gain 24956385
esv3440369 CNV duplication 20981092
esv3343116 CNV duplication 20981092
esv2759593 CNV gain+loss 17122850
esv2736614 CNV deletion 23290073
esv22986 CNV gain+loss 19812545
esv1009029 CNV gain 20482838
dgv7026n100 CNV gain+loss 25217958
dgv7025n100 CNV gain 25217958
dgv7021n100 CNV loss 25217958
dgv7020n100 CNV loss 25217958
dgv7019n100 CNV gain 25217958
dgv7018n100 CNV gain+loss 25217958
dgv7017n100 CNV gain 25217958
dgv7016n100 CNV gain 25217958
dgv7015n100 CNV gain 25217958
dgv27n31 CNV gain 19718026
dgv244e55 CNV gain 17911159
dgv154e203 CNV gain+loss 21179565
dgv1270e199 CNV deletion 23128226
dgv11964n54 CNV loss 21841781
dgv11963n54 CNV loss 21841781
dgv11962n54 CNV loss 21841781
dgv11961n54 CNV loss 21841781
dgv11960n54 CNV gain 21841781
dgv11959n54 CNV loss 21841781

Relevant External Links for USP17L7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
USP17L7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for USP17L7 Gene

Disorders for USP17L7 Gene

Relevant External Links for USP17L7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
USP17L7

No disorders were found for USP17L7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for USP17L7 Gene

Publications for USP17L7 Gene

  1. Hyaluronan- and RNA-binding deubiquitinating enzymes of USP17 family members associated with cell viability. (PMID: 17109758) Shin J.-M. … Baek K.-H. (BMC Genomics 2006) 2 3 4 64
  2. The DUB/USP17 deubiquitinating enzymes, a multigene family within a tandemly repeated sequence. (PMID: 15780755) Burrows J.F. … Johnston J.A. (Genomics 2005) 2 3 4 64
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 3 4 64
  4. Lys-63-specific deubiquitination of SDS3 by USP17 regulates HDAC activity. (PMID: 21239494) Ramakrishna S. … Baek K.H. (J. Biol. Chem. 2011) 3 64
  5. The deubiquitinating enzyme USP17 is essential for GTPase subcellular localization and cell motility. (PMID: 21448158) de la Vega M. … Johnston J.A. (Nat. Commun. 2011) 3 64

Products for USP17L7 Gene

Sources for USP17L7 Gene

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