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Aliases for USP17L23 Gene

Aliases for USP17L23 Gene

  • Ubiquitin Specific Peptidase 17-Like Family Member 23 2 3

External Ids for USP17L23 Gene

Summaries for USP17L23 Gene

GeneCards Summary for USP17L23 Gene

USP17L23 (Ubiquitin Specific Peptidase 17-Like Family Member 23) is a Protein Coding gene. GO annotations related to this gene include ubiquitin thiolesterase activity. An important paralog of this gene is USP36.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP17L23 Gene

Genomics for USP17L23 Gene

Genomic Location for USP17L23 Gene

Start:
9,272,364 bp from pter
End:
9,272,914 bp from pter
Size:
551 bases
Orientation:
Plus strand

Genomic View for USP17L23 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for USP17L23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements and RefSeq DNA sequence for USP17L23 Gene

Proteins for USP17L23 Gene

  • Protein details for USP17L23 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    D6RBM5-U17LN_HUMAN
    Recommended name:
    Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 23
    Protein Accession:
    D6RBM5
    Secondary Accessions:

    Protein attributes for USP17L23 Gene

    Size:
    183 amino acids
    Molecular mass:
    20302 Da
    Quaternary structure:
    No Data Available

neXtProt entry for USP17L23 Gene

Proteomics data for USP17L23 Gene at MOPED

Post-translational modifications for USP17L23 Gene

No Post-translational modifications

Other Protein References for USP17L23 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for USP17L23 Gene

Domains for USP17L23 Gene

Protein Domains for USP17L23 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

D6RBM5

UniProtKB/Swiss-Prot:

U17LN_HUMAN :
  • D6RBM5
Domain:
  • Contains 1 USP domain.
Family:
  • Belongs to the peptidase C19 family. USP17 subfamily.
genes like me logo Genes that share domains with USP17L23: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for USP17L23 Gene

Function for USP17L23 Gene

Gene Ontology (GO) - Molecular Function for USP17L23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0036459 ubiquitinyl hydrolase activity IEA --
genes like me logo Genes that share ontologies with USP17L23: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for USP17L23 Gene

Localization for USP17L23 Gene

Subcellular locations from UniProtKB/Swiss-Prot for USP17L23 Gene

Nucleus. Endoplasmic reticulum.

Gene Ontology (GO) - Cellular Components for USP17L23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005783 endoplasmic reticulum IEA --
genes like me logo Genes that share ontologies with USP17L23: view

No data available for Subcellular locations from COMPARTMENTS for USP17L23 Gene

Pathways for USP17L23 Gene

SuperPathways for USP17L23 Gene

No Data Available

Gene Ontology (GO) - Biological Process for USP17L23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006511 ubiquitin-dependent protein catabolic process IEA --
genes like me logo Genes that share ontologies with USP17L23: view

No data available for Pathways by source for USP17L23 Gene

Transcripts for USP17L23 Gene

mRNA/cDNA for USP17L23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP17L23 Gene

No ASD Table

Relevant External Links for USP17L23 Gene

GeneLoc Exon Structure for
USP17L23
ECgene alternative splicing isoforms for
USP17L23

Expression for USP17L23 Gene

mRNA expression in normal human tissues for USP17L23 Gene

genes like me logo Genes that share expressions with USP17L23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for USP17L23 Gene

Orthologs for USP17L23 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for USP17L23 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia USP17L23 36
  • 50 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 19 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Usp17la 36
  • 14 (a)
ManyToMany
Usp17lb 36
  • 17 (a)
ManyToMany
Usp17lc 36
  • 14 (a)
ManyToMany
Usp17ld 36
  • 14 (a)
ManyToMany
Usp17le 36
  • 15 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii usp42 36
  • 7 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta scny 36
  • 5 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes UBP8 36
  • 6 (a)
OneToMany
Species with no ortholog for USP17L23:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for USP17L23 Gene

ENSEMBL:
Gene Tree for USP17L23 (if available)
TreeFam:
Gene Tree for USP17L23 (if available)

Paralogs for USP17L23 Gene

genes like me logo Genes that share paralogs with USP17L23: view

Variants for USP17L23 Gene

Relevant External Links for USP17L23 Gene

HapMap Linkage Disequilibrium report
USP17L23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for USP17L23 Gene

Disorders for USP17L23 Gene

No disorders were found for USP17L23 Gene.

No data available for UniProtKB/Swiss-Prot for USP17L23 Gene

Publications for USP17L23 Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4

Products for USP17L23 Gene

Sources for USP17L23 Gene

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