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Aliases for USP17L23 Gene

Aliases for USP17L23 Gene

  • Ubiquitin Specific Peptidase 17-Like Family Member 23 2 3 5

External Ids for USP17L23 Gene

Summaries for USP17L23 Gene

GeneCards Summary for USP17L23 Gene

USP17L23 (Ubiquitin Specific Peptidase 17-Like Family Member 23) is a Protein Coding gene. GO annotations related to this gene include thiol-dependent ubiquitinyl hydrolase activity. An important paralog of this gene is USP36.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP17L23 Gene

Genomics for USP17L23 Gene

Regulatory Elements for USP17L23 Gene

Enhancers for USP17L23 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around USP17L23 on UCSC Golden Path with GeneCards custom track

Genomic Location for USP17L23 Gene

Chromosome:
4
Start:
9,272,364 bp from pter
End:
9,272,914 bp from pter
Size:
551 bases
Orientation:
Plus strand

Genomic View for USP17L23 Gene

Genes around USP17L23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP17L23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP17L23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for USP17L23 Gene

Proteins for USP17L23 Gene

  • Protein details for USP17L23 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    D6RBM5-U17LN_HUMAN
    Recommended name:
    Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 23
    Protein Accession:
    D6RBM5

    Protein attributes for USP17L23 Gene

    Size:
    183 amino acids
    Molecular mass:
    20302 Da
    Quaternary structure:
    No Data Available

neXtProt entry for USP17L23 Gene

Proteomics data for USP17L23 Gene at MOPED

Post-translational modifications for USP17L23 Gene

No Post-translational modifications

Other Protein References for USP17L23 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for USP17L23 Gene

Domains & Families for USP17L23 Gene

Protein Domains for USP17L23 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

D6RBM5

UniProtKB/Swiss-Prot:

U17LN_HUMAN :
  • Contains 1 USP domain.
  • Belongs to the peptidase C19 family. USP17 subfamily.
Domain:
  • Contains 1 USP domain.
Family:
  • Belongs to the peptidase C19 family. USP17 subfamily.
genes like me logo Genes that share domains with USP17L23: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for USP17L23 Gene

Function for USP17L23 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP17L23 Gene

Localization for USP17L23 Gene

Subcellular locations from UniProtKB/Swiss-Prot for USP17L23 Gene

Nucleus. Endoplasmic reticulum.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for USP17L23 Gene COMPARTMENTS Subcellular localization image for USP17L23 gene
Compartment Confidence
endoplasmic reticulum 3
nucleus 3

No data available for Gene Ontology (GO) - Cellular Components for USP17L23 Gene

Pathways & Interactions for USP17L23 Gene

SuperPathways for USP17L23 Gene

No Data Available

Gene Ontology (GO) - Biological Process for USP17L23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for USP17L23 Gene

Drugs & Compounds for USP17L23 Gene

No Compound Related Data Available

Transcripts for USP17L23 Gene

mRNA/cDNA for USP17L23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP17L23 Gene

No ASD Table

Relevant External Links for USP17L23 Gene

GeneLoc Exon Structure for
USP17L23
ECgene alternative splicing isoforms for
USP17L23

Expression for USP17L23 Gene

mRNA expression in normal human tissues for USP17L23 Gene

genes like me logo Genes that share expression patterns with USP17L23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for USP17L23 Gene

Orthologs for USP17L23 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for USP17L23 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia -- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 19 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Usp17la 36
  • 14 (a)
ManyToMany
Usp17lb 36
  • 17 (a)
ManyToMany
Usp17lc 36
  • 14 (a)
ManyToMany
Usp17ld 36
  • 14 (a)
ManyToMany
Usp17le 36
  • 15 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia USP17L23 36
  • 50 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii usp42 36
  • 7 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta scny 36
  • 5 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes UBP8 36
  • 6 (a)
OneToMany
Species with no ortholog for USP17L23:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for USP17L23 Gene

ENSEMBL:
Gene Tree for USP17L23 (if available)
TreeFam:
Gene Tree for USP17L23 (if available)

Paralogs for USP17L23 Gene

genes like me logo Genes that share paralogs with USP17L23: view

Variants for USP17L23 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for USP17L23 Gene

Disorders for USP17L23 Gene

No disorders were found for USP17L23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for USP17L23 Gene

Publications for USP17L23 Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4 67

Products for USP17L23 Gene

Sources for USP17L23 Gene

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