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Aliases for USP12-AS2 Gene

Subcategory (RNA class) for USP12-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for USP12-AS2 Gene

  • USP12 Antisense RNA 2 (Head To Head) 2 3 5
  • USP12 Antisense RNA 2 (Non-Protein Coding) 2
  • USP12 Antisense RNA 2 2

External Ids for USP12-AS2 Gene

Previous GeneCards Identifiers for USP12-AS2 Gene

  • GC00U933669
  • GC13P027747

Summaries for USP12-AS2 Gene

GeneCards Summary for USP12-AS2 Gene

USP12-AS2 (USP12 Antisense RNA 2 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for USP12-AS2 Gene

Genomics for USP12-AS2 Gene

Regulatory Elements for USP12-AS2 Gene

Enhancers for USP12-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F027130 1.5 FANTOM5 Ensembl ENCODE 17.2 -39.2 -39159 6.6 TBP TBL1XR1 INSM2 BMI1 FEZF1 RARA YY1 CBX5 ZNF143 ETV6 USP12 USP12-AS2 RPL21 SNORA27 SNORD102 RASL11A LINC00412 USP12-AS1
GH13F027137 1.2 Ensembl ENCODE 17.5 -34.0 -33974 1.8 ATF1 PKNOX1 ELK1 GATA2 KLF13 CREB3 MEF2D SMARCA4 PBX2 KDM1A USP12 USP12-AS2 RPL21 SNORA27 SNORD102 LINC00412 RASL11A USP12-AS1
GH13F027124 1.2 Ensembl ENCODE 11.4 -46.2 -46161 3.0 TBP HDAC1 ATF1 PKNOX1 CBX3 NFRKB ZNF76 FEZF1 YY1 CHAMP1 USP12 USP12-AS2 RASL11A LINC00412 USP12-AS1
GH13F027263 1.1 Ensembl ENCODE 10.2 +93.5 93523 4.8 CTCF INSM2 MAX FEZF1 CEBPG RAD21 RARA ZNF664 ZNF335 GATA3 LINC00412 RNU6-70P USP12 USP12-AS2 RASL11A GC13P027262
GH13F027078 0.8 Ensembl ENCODE 11 -92.4 -92433 2.1 SOX13 PKNOX1 ARNT SCRT2 TEAD4 SMAD4 CEBPG USP12-AS1 USP12 USP12-AS2 SNORA27 SNORD102 RPL21 LINC00412 RBBP8P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around USP12-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for USP12-AS2 Gene

27,172,259 bp from pter
27,183,503 bp from pter
11,245 bases
Plus strand

Genomic View for USP12-AS2 Gene

Genes around USP12-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
USP12-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for USP12-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for USP12-AS2 Gene

Proteins for USP12-AS2 Gene

Post-translational modifications for USP12-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for USP12-AS2 Gene

Domains & Families for USP12-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for USP12-AS2 Gene

Function for USP12-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for USP12-AS2 Gene

Localization for USP12-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for USP12-AS2 Gene

Pathways & Interactions for USP12-AS2 Gene

SuperPathways for USP12-AS2 Gene

No Data Available

Interacting Proteins for USP12-AS2 Gene

Gene Ontology (GO) - Biological Process for USP12-AS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for USP12-AS2 Gene

Transcripts for USP12-AS2 Gene

mRNA/cDNA for USP12-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for USP12-AS2 Gene

No ASD Table

Relevant External Links for USP12-AS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for USP12-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for USP12-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for USP12-AS2 Gene

This gene is overexpressed in Testis (x7.1) and Brain - Nucleus accumbens (basal ganglia) (x5.5).
genes like me logo Genes that share expression patterns with USP12-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for USP12-AS2 Gene

Orthologs for USP12-AS2 Gene

Evolution for USP12-AS2 Gene

Gene Tree for USP12-AS2 (if available)
Gene Tree for USP12-AS2 (if available)

No data available for Orthologs for USP12-AS2 Gene

Paralogs for USP12-AS2 Gene

No data available for Paralogs for USP12-AS2 Gene

Variants for USP12-AS2 Gene

Sequence variations from dbSNP and Humsavar for USP12-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs11149469 -- 27,180,658(+) aatgt(C/G)gatgc intron-variant
rs112029192 -- 27,182,368(+) AGATG(-/A)AAAAA intron-variant
rs112426227 -- 27,174,144(+) GCGAC(-/A)AGACT intron-variant
rs112499493 -- 27,180,949(+) CTGCA(C/G)TCTAG intron-variant
rs112515274 -- 27,173,905(+) GCACT(C/T)TGGGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for USP12-AS2 Gene

Variant ID Type Subtype PubMed ID
esv2583727 CNV deletion 19546169

Relevant External Links for USP12-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for USP12-AS2 Gene

Disorders for USP12-AS2 Gene

Relevant External Links for USP12-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for USP12-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for USP12-AS2 Gene

Publications for USP12-AS2 Gene

No publications were found for USP12-AS2 Gene.

Products for USP12-AS2 Gene

Sources for USP12-AS2 Gene

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