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Aliases for URB1-AS1 Gene

Subcategory (RNA class) for URB1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for URB1-AS1 Gene

  • URB1 Antisense RNA 1 (Head To Head) 2 3 5
  • C21orf119 3 4
  • Chromosome 21 Open Reading Frame 119 2
  • URB1 Antisense Gene Protein 1 4
  • URB1 Antisense RNA 1 4
  • PRED84 3

External Ids for URB1-AS1 Gene

Previous HGNC Symbols for URB1-AS1 Gene

  • C21orf119

Summaries for URB1-AS1 Gene

GeneCards Summary for URB1-AS1 Gene

URB1-AS1 (URB1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for URB1-AS1 Gene

Genomics for URB1-AS1 Gene

Regulatory Elements for URB1-AS1 Gene

Enhancers for URB1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21G032327 1.7 FANTOM5 Ensembl ENCODE dbSUPER 34.2 -63.1 -63108 4.4 ELF3 FOXA2 MLX FUS ZNF133 ZSCAN4 ARID4B ZSCAN9 GATA4 FOS URB1-AS1 URB1 LOC105372779 SNORA80A GC21M032342 PIR45335
GH21G032363 1 ENCODE dbSUPER 44.1 -28.6 -28576 1.5 ELF3 CTCF SOX13 TFAP4 FOXA2 SAP130 ARID4B RARA TEAD3 NR2F6 URB1-AS1 URB1 LOC105372779 ENSG00000252045 GC21M032360 GC21M032378 SNORA80A
GH21G032388 1.3 ENCODE dbSUPER 33.8 -3.6 -3577 1.6 ATF1 PKNOX1 FEZF1 ZNF48 YY1 GATA2 ELK1 CBX5 FOS NCOA1 URB1-AS1 EVA1C URB1 GC21M032378 SNORA80A
GH21G032370 1.3 Ensembl ENCODE dbSUPER 32.5 -21.2 -21184 3.0 ZBTB21 JUN ZKSCAN1 SCRT2 FOS ZNF639 ZNF680 ZNF362 BHLHE40 ZNF10 URB1-AS1 EVA1C LOC105372779 TCP10L SNORA80A GC21M032378 GC21M032360
GH21G032377 1.2 ENCODE dbSUPER 33.7 -12.6 -12601 5.9 HDAC1 ATF1 CBX3 PKNOX1 ARNT CHAMP1 ZNF766 GATA2 CREM JUNB URB1-AS1 GC21M032378 SNORA80A URB1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around URB1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for URB1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000141415 -230 1401 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF143 KLF13 SP3 SP5

Genomic Location for URB1-AS1 Gene

32,393,130 bp from pter
32,393,960 bp from pter
831 bases
Plus strand

Genomic View for URB1-AS1 Gene

Genes around URB1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
URB1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for URB1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for URB1-AS1 Gene

Proteins for URB1-AS1 Gene

  • Protein details for URB1-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein URB1-AS1
    Protein Accession:

    Protein attributes for URB1-AS1 Gene

    61 amino acids
    Molecular mass:
    6513 Da
    Quaternary structure:
    No Data Available

neXtProt entry for URB1-AS1 Gene

Post-translational modifications for URB1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for URB1-AS1 Gene

Domains & Families for URB1-AS1 Gene

Protein Domains for URB1-AS1 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with URB1-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for URB1-AS1 Gene

Function for URB1-AS1 Gene

Gene Ontology (GO) - Molecular Function for URB1-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with URB1-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for URB1-AS1 Gene

Localization for URB1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for URB1-AS1 Gene

Pathways & Interactions for URB1-AS1 Gene

SuperPathways for URB1-AS1 Gene

No Data Available

Interacting Proteins for URB1-AS1 Gene

Gene Ontology (GO) - Biological Process for URB1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for URB1-AS1 Gene

Drugs & Compounds for URB1-AS1 Gene

No Compound Related Data Available

Transcripts for URB1-AS1 Gene

mRNA/cDNA for URB1-AS1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for URB1-AS1 Gene

No ASD Table

Relevant External Links for URB1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for URB1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for URB1-AS1 Gene

genes like me logo Genes that share expression patterns with URB1-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for URB1-AS1 Gene

Orthologs for URB1-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for URB1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C21orf119 35
  • 93 (a)
Species where no ortholog for URB1-AS1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for URB1-AS1 Gene

Gene Tree for URB1-AS1 (if available)
Gene Tree for URB1-AS1 (if available)

Paralogs for URB1-AS1 Gene

No data available for Paralogs for URB1-AS1 Gene

Variants for URB1-AS1 Gene

Sequence variations from dbSNP and Humsavar for URB1-AS1 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs1000312073 -- 32,391,300(+) CCAAC(A/G)TGGCA intron-variant, upstream-variant-2KB
rs1000616459 -- 32,393,245(+) TCCAC(A/G)ACACC nc-transcript-variant, upstream-variant-2KB
rs1001624336 -- 32,392,556(+) ACGGT(A/C)CCAAT intron-variant, upstream-variant-2KB
rs1003293914 -- 32,391,988(+) CACTG(C/T)ACTTC intron-variant, upstream-variant-2KB
rs1003703670 -- 32,393,678(+) GGGCT(C/T)TTTGC nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for URB1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv518458 CNV loss 19592680
nsv834085 CNV gain 17160897

Variation tolerance for URB1-AS1 Gene

Gene Damage Index Score: 4.46; 64.21% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for URB1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for URB1-AS1 Gene

Disorders for URB1-AS1 Gene

Relevant External Links for URB1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for URB1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for URB1-AS1 Gene

Publications for URB1-AS1 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  4. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 4 64

Products for URB1-AS1 Gene

Sources for URB1-AS1 Gene

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