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Aliases for URAHP Gene

Aliases for URAHP Gene

  • Urate (Hydroxyiso-) Hydrolase, Pseudogene 2 3 5
  • HIU Hydrolase 2 3
  • 5-Hydroxyisourate Hydrolase Pseudogene 3
  • URAH 3

External Ids for URAHP Gene

Previous GeneCards Identifiers for URAHP Gene

  • GC16M090110

Summaries for URAHP Gene

GeneCards Summary for URAHP Gene

URAHP (Urate (Hydroxyiso-) Hydrolase, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for URAHP Gene

Genomics for URAHP Gene

Regulatory Elements for URAHP Gene

Enhancers for URAHP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G089382 1.4 Ensembl ENCODE dbSUPER 12.9 +664.5 664467 1.4 HDGF HDAC1 CBX3 TBL1XR1 ARID4B SIN3A ZNF48 RAD21 TCF12 ZNF121 AFG3L1P MC1R ENSG00000259877 URAHP LOC100128882 RNU6-430P CTU2 LOC101927863 SPG7 ENSG00000268218
GH16G089993 1.6 Ensembl ENCODE dbSUPER 11.1 +52.5 52536 3.5 HDGF PKNOX1 FOXA2 CREB3L1 ARNT ZFP64 ARID4B SIN3A ZNF2 ZBTB7B ENSG00000259877 AFG3L1P MC1R LINC00304 SPG7 DBNDD1 LOC101927863 GAS8 SNORD68 URAHP
GH16G089573 1.3 ENCODE dbSUPER 12.9 +472.4 472363 2.9 HDGF ATF1 PKNOX1 CREB3L1 ARNT AGO1 SIN3A ARID4B ZNF48 ZNF2 AFG3L1P CDK10 MC1R SPG7 ENSG00000259877 URAHP CTU2 RPL13 LOC101927863 ENSG00000268218
GH16G089401 1.1 Ensembl ENCODE dbSUPER 12.9 +644.9 644868 2.8 RING1 ZNF133 RAD21 ZFP69B GATA3 ZNF692 ZBTB33 EGR2 ZNF18 AFG3L1P MC1R ENSG00000259877 URAHP RNU6-430P LOC100128882 CTU2 LOC101927863 SPG7 ENSG00000268218
GH16G090018 1.4 FANTOM5 ENCODE 9.9 +26.7 26678 5.3 HDGF PKNOX1 FOXA2 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 DBNDD1 DEF8 PRDM7 GAS8 URAHP GAS8-AS1 TUBB3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around URAHP on UCSC Golden Path with GeneCards custom track

Promoters for URAHP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000089811 83 201 GTF2F1 KLF1 ZNF792 ZBTB40 ZIC2 GLIS2 PATZ1 MAZ L3MBTL2 NR3C1

Genomic Location for URAHP Gene

Chromosome:
16
Start:
90,039,761 bp from pter
End:
90,047,783 bp from pter
Size:
8,023 bases
Orientation:
Minus strand

Genomic View for URAHP Gene

Genes around URAHP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
URAHP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for URAHP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for URAHP Gene

Proteins for URAHP Gene

Post-translational modifications for URAHP Gene

No Post-translational modifications

No data available for DME Specific Peptides for URAHP Gene

Domains & Families for URAHP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for URAHP Gene

Function for URAHP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for URAHP Gene

Localization for URAHP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for URAHP Gene

Pathways & Interactions for URAHP Gene

SuperPathways for URAHP Gene

No Data Available

Interacting Proteins for URAHP Gene

Gene Ontology (GO) - Biological Process for URAHP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for URAHP Gene

Drugs & Compounds for URAHP Gene

No Compound Related Data Available

Transcripts for URAHP Gene

mRNA/cDNA for URAHP Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for URAHP Gene

No ASD Table

Relevant External Links for URAHP Gene

GeneLoc Exon Structure for
URAHP
ECgene alternative splicing isoforms for
URAHP

Expression for URAHP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for URAHP Gene

mRNA differential expression in normal tissues according to GTEx for URAHP Gene

This gene is overexpressed in Liver (x6.4) and Ovary (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of URAHP Gene:

URAHP
genes like me logo Genes that share expression patterns with URAHP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for URAHP Gene

Orthologs for URAHP Gene

Evolution for URAHP Gene

ENSEMBL:
Gene Tree for URAHP (if available)
TreeFam:
Gene Tree for URAHP (if available)

No data available for Orthologs for URAHP Gene

Paralogs for URAHP Gene

No data available for Paralogs for URAHP Gene

Variants for URAHP Gene

Sequence variations from dbSNP and Humsavar for URAHP Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs566755911 Pathogenic 90,040,357(+) AGGTG(C/T)AGCAG nc-transcript-variant, reference, stop-gained
rs1000129739 -- 90,048,348(+) AGCGC(A/C)GGGTG upstream-variant-2KB
rs1000154992 -- 90,040,868(+) ACGAC(A/G)GGTCC intron-variant
rs1001501009 -- 90,045,633(+) TGTCT(C/G/T)TACTA intron-variant
rs1001730003 -- 90,042,686(+) GTCAT(A/G)GCCGA intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for URAHP Gene

Variant ID Type Subtype PubMed ID
dgv3067n100 CNV gain 25217958
esv3639606 CNV gain 21293372
esv3639607 CNV gain 21293372
esv3639608 CNV loss 21293372
nsv1062080 CNV loss 25217958
nsv1064351 CNV gain+loss 25217958
nsv1067164 CNV gain+loss 25217958
nsv1070788 CNV deletion 25765185
nsv1933 CNV insertion 18451855
nsv428331 CNV gain+loss 18775914
nsv457626 CNV loss 19166990
nsv471119 CNV loss 18288195
nsv471120 CNV gain 18288195
nsv482951 CNV loss 15286789
nsv509641 CNV insertion 20534489
nsv573841 CNV loss 21841781
nsv952080 CNV deletion 24416366

Relevant External Links for URAHP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
URAHP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for URAHP Gene

Disorders for URAHP Gene

Relevant External Links for URAHP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
URAHP

No disorders were found for URAHP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for URAHP Gene

Publications for URAHP Gene

  1. The evolutionary fate of the genes encoding the purine catabolic enzymes in hominoids, birds, and reptiles. (PMID: 20106906) Keebaugh A.C. … Thomas J.W. (Mol. Biol. Evol. 2010) 2 3 64
  2. Completing the uric acid degradation pathway through phylogenetic comparison of whole genomes. (PMID: 16462750) Ramazzina I. … Percudani R. (Nat. Chem. Biol. 2006) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for URAHP Gene

Sources for URAHP Gene

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