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Aliases for UPP2-IT1 Gene

Subcategory (RNA class) for UPP2-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for UPP2-IT1 Gene

  • UPP2 Intronic Transcript 1 2 3 5
  • UPP2 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for UPP2-IT1 Gene

Previous GeneCards Identifiers for UPP2-IT1 Gene

  • GC00U933690
  • GC02P158985

Summaries for UPP2-IT1 Gene

GeneCards Summary for UPP2-IT1 Gene

UPP2-IT1 (UPP2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for UPP2-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UPP2-IT1 Gene

Genomics for UPP2-IT1 Gene

Regulatory Elements for UPP2-IT1 Gene

Enhancers for UPP2-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H158126 1 ENCODE 0.7 +2.0 1968 6.4 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 SLC30A9 ZNF143 ATF7 PAF1 PKP4 GALNT5 UPP2-IT1 GC02P158160
GH02H158113 0.7 FANTOM5 Ensembl 0.4 -13.9 -13939 0.8 CEBPA HNF4A PKP4 UPP2-IT1 PTP4A1P1
GH02H158142 0.7 ENCODE 0.4 +15.9 15903 1.9 TFAP4 PKNOX1 ATF1 SOX6 RNF2 JUN CEBPB CEBPG FOSL1 ZNF766 PKP4 GALNT5 UPP2-IT1 GC02P158160
GH02H158093 0.9 ENCODE 0.3 -33.0 -32964 2.6 ELF3 FOXA2 ATF1 MLX ARID4B RAD21 RARA YY1 ZNF143 MIXL1 PKP4 PTP4A1P1 UPP2-IT1
GH02H158143 0.6 ENCODE 0.4 +14.8 14841 0.1 FOSL1 ZNF766 SMARCA4 SOX6 CEBPB CEBPG CREM SPI1 UPP2-IT1 GC02P158160
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UPP2-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for UPP2-IT1 Gene

Genomic Locations for UPP2-IT1 Gene
6,032 bases
Plus strand

Genomic View for UPP2-IT1 Gene

Genes around UPP2-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UPP2-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UPP2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for UPP2-IT1 Gene

Proteins for UPP2-IT1 Gene

Post-translational modifications for UPP2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UPP2-IT1 Gene

Domains & Families for UPP2-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UPP2-IT1 Gene

Function for UPP2-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UPP2-IT1 Gene

Localization for UPP2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UPP2-IT1 Gene

Pathways & Interactions for UPP2-IT1 Gene

SuperPathways for UPP2-IT1 Gene

No Data Available

Interacting Proteins for UPP2-IT1 Gene

Gene Ontology (GO) - Biological Process for UPP2-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for UPP2-IT1 Gene

Drugs & Compounds for UPP2-IT1 Gene

No Compound Related Data Available

Transcripts for UPP2-IT1 Gene

mRNA/cDNA for UPP2-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for UPP2-IT1 Gene

No ASD Table

Relevant External Links for UPP2-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for UPP2-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UPP2-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for UPP2-IT1 Gene

This gene is overexpressed in Liver (x9.5), Kidney - Cortex (x5.5), and Brain - Nucleus accumbens (basal ganglia) (x4.3).
genes like me logo Genes that share expression patterns with UPP2-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UPP2-IT1 Gene

Orthologs for UPP2-IT1 Gene

Evolution for UPP2-IT1 Gene

Gene Tree for UPP2-IT1 (if available)
Gene Tree for UPP2-IT1 (if available)

No data available for Orthologs for UPP2-IT1 Gene

Paralogs for UPP2-IT1 Gene

No data available for Paralogs for UPP2-IT1 Gene

Variants for UPP2-IT1 Gene

Relevant External Links for UPP2-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UPP2-IT1 Gene

Disorders for UPP2-IT1 Gene

No disorders were found for UPP2-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for UPP2-IT1 Gene

Publications for UPP2-IT1 Gene

No publications were found for UPP2-IT1 Gene.

Products for UPP2-IT1 Gene

Sources for UPP2-IT1 Gene

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