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Aliases for UNC5B-AS1 Gene

Subcategory (RNA class) for UNC5B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UNC5B-AS1 Gene

  • UNC5B Antisense RNA 1 2 3 5

External Ids for UNC5B-AS1 Gene

Previous GeneCards Identifiers for UNC5B-AS1 Gene

  • GC10M072979

Summaries for UNC5B-AS1 Gene

GeneCards Summary for UNC5B-AS1 Gene

UNC5B-AS1 (UNC5B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for UNC5B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UNC5B-AS1 Gene

Genomics for UNC5B-AS1 Gene

Regulatory Elements for UNC5B-AS1 Gene

Enhancers for UNC5B-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H071243 1.4 Ensembl ENCODE dbSUPER 22.3 -28.4 -28384 6 HDAC1 PKNOX1 PTBP1 ZSCAN4 KLF17 ZNF366 SCRT2 FOS RCOR1 EGR2 UNC5B UNC5B-AS1 PCBD1 PIR59347 PIR34735
GH10H071240 1.3 Ensembl ENCODE dbSUPER 22.3 -23.4 -23356 2 BCOR CTCF KLF1 ZMYM3 RAD21 ZIC2 HIC1 ZFHX2 ZNF766 ZNF316 UNC5B UNC5B-AS1 PCBD1 PIR59347 PIR34735
GH10H071231 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.4 -16.3 -16292 5 HDGF PKNOX1 FEZF1 ZNF121 GLIS2 GATA2 KLF7 ATF7 ZNF610 GLIS1 UNC5B UNC5B-AS1 PCBD1 SLC29A3 C10orf105 PIR59347
GH10H071265 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.5 -50.9 -50863 7 HDGF PKNOX1 FEZF1 ZNF2 ZNF143 FOS ZNF548 SP3 REST ZNF592 UNC5B UNC5B-AS1 SLC29A3 CDH23-AS1 CDH23 PCBD1 PIR34735 PIR59347
GH10H071251 1.3 Ensembl ENCODE dbSUPER 11.6 -36.1 -36146 5 PKNOX1 KLF1 ZMYM3 POLR2A SCRT2 ADNP FOS RCOR1 ATF7 SMAD5 UNC5B UNC5B-AS1 PCBD1 CDH23 PIR59347 PIR34735
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UNC5B-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UNC5B-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000029512 728 601 ZBTB10 CTCF ZMYM3 FEZF1 ZEB2 ZBTB8A ZNF398 ZIC2 HIC1 ZFHX2

Genomic Location for UNC5B-AS1 Gene

Chromosome:
10
Start:
71,217,224 bp from pter
End:
71,218,228 bp from pter
Size:
1,005 bases
Orientation:
Minus strand

Genomic View for UNC5B-AS1 Gene

Genes around UNC5B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UNC5B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UNC5B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UNC5B-AS1 Gene

Proteins for UNC5B-AS1 Gene

Post-translational modifications for UNC5B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UNC5B-AS1 Gene

Domains & Families for UNC5B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UNC5B-AS1 Gene

Function for UNC5B-AS1 Gene

Phenotypes From GWAS Catalog for UNC5B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UNC5B-AS1 Gene

Localization for UNC5B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UNC5B-AS1 Gene

Pathways & Interactions for UNC5B-AS1 Gene

SuperPathways for UNC5B-AS1 Gene

No Data Available

Interacting Proteins for UNC5B-AS1 Gene

Gene Ontology (GO) - Biological Process for UNC5B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UNC5B-AS1 Gene

Drugs & Compounds for UNC5B-AS1 Gene

No Compound Related Data Available

Transcripts for UNC5B-AS1 Gene

mRNA/cDNA for UNC5B-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UNC5B-AS1 Gene

UNC5B antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UNC5B-AS1 Gene

No ASD Table

Relevant External Links for UNC5B-AS1 Gene

GeneLoc Exon Structure for
UNC5B-AS1
ECgene alternative splicing isoforms for
UNC5B-AS1

Expression for UNC5B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UNC5B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UNC5B-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x11.4) and Heart - Left Ventricle (x7.3).

SOURCE GeneReport for Unigene cluster for UNC5B-AS1 Gene:

Hs.646725
genes like me logo Genes that share expression patterns with UNC5B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UNC5B-AS1 Gene

Orthologs for UNC5B-AS1 Gene

Evolution for UNC5B-AS1 Gene

ENSEMBL:
Gene Tree for UNC5B-AS1 (if available)
TreeFam:
Gene Tree for UNC5B-AS1 (if available)

No data available for Orthologs for UNC5B-AS1 Gene

Paralogs for UNC5B-AS1 Gene

No data available for Paralogs for UNC5B-AS1 Gene

Variants for UNC5B-AS1 Gene

Sequence variations from dbSNP and Humsavar for UNC5B-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1001033717 -- 71,216,750(+) ACGCC(C/T)CATTC intron-variant
rs1004593721 -- 71,217,536(+) CGGCC(C/G)GGAGC intron-variant, nc-transcript-variant
rs1004659816 -- 71,219,857(+) ATGGG(A/G)CTTCC intron-variant, upstream-variant-2KB
rs1006072938 -- 71,218,672(+) AGATC(A/G)GAGTC intron-variant, upstream-variant-2KB
rs1006800061 -- 71,217,075(+) CCCCC(A/C)GAGGG intron-variant

Relevant External Links for UNC5B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UNC5B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UNC5B-AS1 Gene

Disorders for UNC5B-AS1 Gene

Relevant External Links for UNC5B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UNC5B-AS1

No disorders were found for UNC5B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UNC5B-AS1 Gene

Publications for UNC5B-AS1 Gene

  1. p53-inducible long non-coding RNA PICART1 mediates cancer cell proliferation and migration. (PMID: 28339031) Cao Y … Cao D (International journal of oncology 2017) 3 60
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60

Products for UNC5B-AS1 Gene

Sources for UNC5B-AS1 Gene

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