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Aliases for UNC5B-AS1 Gene

Subcategory (RNA class) for UNC5B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UNC5B-AS1 Gene

  • UNC5B Antisense RNA 1 2 3 5

External Ids for UNC5B-AS1 Gene

Previous GeneCards Identifiers for UNC5B-AS1 Gene

  • GC10M072979

Summaries for UNC5B-AS1 Gene

GeneCards Summary for UNC5B-AS1 Gene

UNC5B-AS1 (UNC5B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UNC5B-AS1 Gene

Genomics for UNC5B-AS1 Gene

Regulatory Elements for UNC5B-AS1 Gene

Enhancers for UNC5B-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F071239 1 Ensembl ENCODE 23.1 -26.6 -26625 10.1 HDAC1 PKNOX1 SIN3A KLF17 RAD21 GATA2 ZNF366 SCRT2 RCOR1 FOS UNC5B UNC5B-AS1 PCBD1 PIR59347 PIR34735
GH10F071229 0.6 Ensembl 16 -12.1 -12073 2.2 KLF1 NR2F1 BACH1 ZFHX2 SCRT2 IKZF1 PBX2 ZNF600 NR2F6 NR2C2 UNC5B-AS1 SLC29A3 UNC5B PIR59347
GH10F071231 1.1 FANTOM5 Ensembl ENCODE 12.4 -16.4 -16402 5.5 PKNOX1 SIN3A FEZF1 ZNF121 GLIS2 KLF7 ZNF263 ZNF610 PBX2 GLIS1 UNC5B UNC5B-AS1 PCBD1 SLC29A3 C10orf105 PIR59347
GH10F071251 1.1 Ensembl ENCODE 11.6 -36.1 -36146 5.6 KLF1 ESRRA PKNOX1 ZMYM3 RAD21 ZNF664 POLR2A SCRT2 SMC3 FOS UNC5B UNC5B-AS1 PCBD1 CDH23 PIR34735 PIR59347
GH10F071259 1 Ensembl ENCODE 11.5 -43.9 -43910 5.5 RAD21 ZNF121 GLIS2 FOS EGR2 SMARCA5 NFIL3 ZNF341 CEBPA MYC UNC5B UNC5B-AS1 CDH23 PIR34735 PIR59347
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around UNC5B-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UNC5B-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001761370 728 1001 CTCF KLF1 ZMYM3 FEZF1 ZIC2 ZNF2 HIC1 ZFHX2 GLIS2 PATZ1

Genomic Location for UNC5B-AS1 Gene

Chromosome:
10
Start:
71,217,224 bp from pter
End:
71,218,228 bp from pter
Size:
1,005 bases
Orientation:
Minus strand

Genomic View for UNC5B-AS1 Gene

Genes around UNC5B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UNC5B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UNC5B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UNC5B-AS1 Gene

Proteins for UNC5B-AS1 Gene

Post-translational modifications for UNC5B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UNC5B-AS1 Gene

Domains & Families for UNC5B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UNC5B-AS1 Gene

Function for UNC5B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UNC5B-AS1 Gene

Localization for UNC5B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UNC5B-AS1 Gene

Pathways & Interactions for UNC5B-AS1 Gene

SuperPathways for UNC5B-AS1 Gene

No Data Available

Interacting Proteins for UNC5B-AS1 Gene

Gene Ontology (GO) - Biological Process for UNC5B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UNC5B-AS1 Gene

Transcripts for UNC5B-AS1 Gene

mRNA/cDNA for UNC5B-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UNC5B-AS1 Gene

UNC5B antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UNC5B-AS1 Gene

No ASD Table

Relevant External Links for UNC5B-AS1 Gene

GeneLoc Exon Structure for
UNC5B-AS1
ECgene alternative splicing isoforms for
UNC5B-AS1

Expression for UNC5B-AS1 Gene

mRNA expression in normal human tissues for UNC5B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UNC5B-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x11.4) and Heart - Left Ventricle (x7.3).

SOURCE GeneReport for Unigene cluster for UNC5B-AS1 Gene:

Hs.646725
genes like me logo Genes that share expression patterns with UNC5B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UNC5B-AS1 Gene

Orthologs for UNC5B-AS1 Gene

Evolution for UNC5B-AS1 Gene

ENSEMBL:
Gene Tree for UNC5B-AS1 (if available)
TreeFam:
Gene Tree for UNC5B-AS1 (if available)

No data available for Orthologs for UNC5B-AS1 Gene

Paralogs for UNC5B-AS1 Gene

No data available for Paralogs for UNC5B-AS1 Gene

Variants for UNC5B-AS1 Gene

Sequence variations from dbSNP and Humsavar for UNC5B-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs111513208 -- 71,219,209(+) TCTCA(C/T)TTAGA intron-variant, upstream-variant-2KB
rs113437997 -- 71,217,623(+) TCCCG(G/T)TCTTC intron-variant, nc-transcript-variant
rs113721046 -- 71,219,483(+) TTCAC(A/G)TTTTT intron-variant, upstream-variant-2KB
rs113959405 -- 71,218,010(+) GCTGC(A/C)CGGCT intron-variant, nc-transcript-variant
rs114686645 -- 71,216,897(+) TCCCT(A/C)CCCCA intron-variant

Relevant External Links for UNC5B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UNC5B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UNC5B-AS1 Gene

Disorders for UNC5B-AS1 Gene

Relevant External Links for UNC5B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UNC5B-AS1

No disorders were found for UNC5B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UNC5B-AS1 Gene

Publications for UNC5B-AS1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for UNC5B-AS1 Gene

Sources for UNC5B-AS1 Gene

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