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Aliases for UHRF1BP1L Gene

Aliases for UHRF1BP1L Gene

  • UHRF1 Binding Protein 1-Like 2 3
  • Syntaxin 6Habc-Interacting Protein Of 164 KDa 3
  • UHRF1 (ICBP90) Binding Protein 1-Like 3
  • UHRF1-Binding Protein 1-Like 3
  • KIAA0701 4
  • SHIP164 3

External Ids for UHRF1BP1L Gene

Summaries for UHRF1BP1L Gene

GeneCards Summary for UHRF1BP1L Gene

UHRF1BP1L (UHRF1 Binding Protein 1-Like) is a Protein Coding gene. An important paralog of this gene is UHRF1BP1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UHRF1BP1L Gene

Genomics for UHRF1BP1L Gene

Genomic Location for UHRF1BP1L Gene

Start:
100,028,455 bp from pter
End:
100,142,864 bp from pter
Size:
114,410 bases
Orientation:
Minus strand

Genomic View for UHRF1BP1L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UHRF1BP1L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UHRF1BP1L Gene

Regulatory Elements for UHRF1BP1L Gene

Proteins for UHRF1BP1L Gene

  • Protein details for UHRF1BP1L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0JNW5-UH1BL_HUMAN
    Recommended name:
    UHRF1-binding protein 1-like
    Protein Accession:
    A0JNW5
    Secondary Accessions:
    • A0PJE5
    • O75183
    • Q8NDL1
    • Q96C30
    • Q9BTS5
    • Q9H0F1

    Protein attributes for UHRF1BP1L Gene

    Size:
    1464 amino acids
    Molecular mass:
    164199 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAI27018.1; Type=Frameshift; Positions=1004; Evidence={ECO:0000305}; Sequence=CAB66755.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for UHRF1BP1L Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for UHRF1BP1L Gene

Proteomics data for UHRF1BP1L Gene at MOPED

Post-translational modifications for UHRF1BP1L Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for UHRF1BP1L Gene

Domains for UHRF1BP1L Gene

Protein Domains for UHRF1BP1L Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for UHRF1BP1L Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with UHRF1BP1L: view

No data available for Gene Families and UniProtKB/Swiss-Prot for UHRF1BP1L Gene

Function for UHRF1BP1L Gene

Phenotypes for UHRF1BP1L Gene

genes like me logo Genes that share phenotypes with UHRF1BP1L: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for UHRF1BP1L Gene

Localization for UHRF1BP1L Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for UHRF1BP1L Gene COMPARTMENTS Subcellular localization image for UHRF1BP1L gene
Compartment Confidence
plasma membrane 3
cytosol 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for UHRF1BP1L Gene

Pathways for UHRF1BP1L Gene

SuperPathways for UHRF1BP1L Gene

No Data Available

Interacting Proteins for UHRF1BP1L Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000279907%0d%0a9606.ENSP00000244769%0d%0a9606.ENSP00000300161%0d%0a
Selected Interacting proteins: ENSP00000279907 for UHRF1BP1L Gene via STRING

Gene Ontology (GO) - Biological Process for UHRF1BP1L Gene

None

No data available for Pathways by source for UHRF1BP1L Gene

Transcripts for UHRF1BP1L Gene

Unigene Clusters for UHRF1BP1L Gene

UHRF1 binding protein 1-like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UHRF1BP1L Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23
SP1: -
SP2: - -
SP3: -
SP4:

Relevant External Links for UHRF1BP1L Gene

GeneLoc Exon Structure for
UHRF1BP1L
ECgene alternative splicing isoforms for
UHRF1BP1L

Expression for UHRF1BP1L Gene

mRNA expression in normal human tissues for UHRF1BP1L Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for UHRF1BP1L Gene

SOURCE GeneReport for Unigene cluster for UHRF1BP1L Gene Hs.620701

genes like me logo Genes that share expressions with UHRF1BP1L: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for UHRF1BP1L Gene

Orthologs for UHRF1BP1L Gene

This gene was present in the common ancestor of animals.

Orthologs for UHRF1BP1L Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia UHRF1BP1L 35
  • 99.57 (n)
  • 99.45 (a)
UHRF1BP1L 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia UHRF1BP1L 35
  • 91.41 (n)
  • 90.73 (a)
UHRF1BP1L 36
  • 87 (a)
OneToOne
dog
(Canis familiaris)
Mammalia UHRF1BP1L 35
  • 91.65 (n)
  • 91.31 (a)
UHRF1BP1L 36
  • 91 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Uhrf1bp1l 35
  • 84.03 (n)
  • 85.84 (a)
Uhrf1bp1l 16
Uhrf1bp1l 36
  • 85 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia UHRF1BP1L 36
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia UHRF1BP1L 36
  • 77 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Uhrf1bp1l 35
  • 83.28 (n)
  • 83.71 (a)
chicken
(Gallus gallus)
Aves UHRF1BP1L 35
  • 71.9 (n)
  • 71.83 (a)
UHRF1BP1L 36
  • 71 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia UHRF1BP1L 36
  • 64 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.5017 35
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.17738 35
uhrf1bp1l 35
  • 64.03 (n)
  • 63.05 (a)
zebrafish
(Danio rerio)
Actinopterygii uhrf1bp1l 35
  • 59.55 (n)
  • 59.72 (a)
uhrf1bp1l 36
  • 51 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP008379 35
  • 43.21 (n)
  • 34.54 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG34126 35
  • 43.7 (n)
  • 35.38 (a)
CG34126 36
  • 24 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea C44H4.4 36
  • 23 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 21 (a)
OneToMany
Species with no ortholog for UHRF1BP1L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for UHRF1BP1L Gene

ENSEMBL:
Gene Tree for UHRF1BP1L (if available)
TreeFam:
Gene Tree for UHRF1BP1L (if available)

Paralogs for UHRF1BP1L Gene

Paralogs for UHRF1BP1L Gene

Selected SIMAP similar genes for UHRF1BP1L Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with UHRF1BP1L: view

Variants for UHRF1BP1L Gene

Sequence variations from dbSNP and Humsavar for UHRF1BP1L Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs12801 -- 100,033,933(-) cagta(G/T)ctttg intron-variant
rs25523 -- 100,110,448(-) GGGTT(G/T)TTTGT intron-variant
rs726732 -- 100,061,312(+) AACCC(C/T)GATAG intron-variant
rs1056683 -- 100,047,593(-) CTCCT(G/T)TAACT reference, missense
rs1073531 -- 100,105,088(+) AACAC(A/G)ATTCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for UHRF1BP1L Gene

Variant ID Type Subtype PubMed ID
nsv523049 CNV Loss 19592680
nsv899466 CNV Loss 21882294
nsv518866 CNV Loss 19592680
esv3021 CNV Deletion 18987735
esv2664572 CNV Deletion 23128226
esv2746274 CNV Deletion 23290073
nsv899467 CNV Loss 21882294

Relevant External Links for UHRF1BP1L Gene

HapMap Linkage Disequilibrium report
UHRF1BP1L

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for UHRF1BP1L Gene

Disorders for UHRF1BP1L Gene

No disorders were found for UHRF1BP1L Gene.

No data available for UniProtKB/Swiss-Prot for UHRF1BP1L Gene

Publications for UHRF1BP1L Gene

  1. Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PMID: 9734811) Ishikawa K. … Ohara O. (DNA Res. 1998) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A novel syntaxin 6-interacting protein, SHIP164, regulates syntaxin 6-dependent sorting from early endosomes. (PMID: 20163565) Otto G.P. … Tooze S.A. (Traffic 2010) 3
  4. Systematic analysis of human protein complexes identifies chromosome segregation proteins. (PMID: 20360068) Hutchins J.R. … Peters J.M. (Science 2010) 3
  5. Development and application of a DNA microarray-based yeast two-hybrid system. (PMID: 23275563) Suter B. … Wanker E.E. (Nucleic Acids Res. 2013) 3

Products for UHRF1BP1L Gene

Sources for UHRF1BP1L Gene

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