UHMK1 Gene
protein-coding GIFtS: 56
GCID: GC01P162467
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U2AF homology motif (UHM) kinase 1
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Aliases
for UHMK1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| U2AF Homology Motif (UHM) Kinase 11 2 | | Kinase Interacting With Leukemia-Associated Gene (Stathmin)2 | | KIS1 2 3 5 | | KIS Protein Kinase2 | | KIST2 3 | | Serine/Threonine-Protein Kinase Kist2 | | P-CIP22 3 | | EC 2.7.11.13 | | PAM COOH-Terminal Interactor Protein 22 3 | | Kinase Interacting With Stathmin3 | | Kist1 | | U2AF Homology Motif Kinase 13 |
Export aliases for UHMK1 gene to outside databasesPrevious GC identifers: GC01P159200 GC01P160734 GC01P133712 |
Summaries
for UHMK1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for UHMK1:
The gene encodes a serine/threonine protein kinase that promotes cell cycle progression through G1 by phosphorylationof the cyclin-dependent kinase inhibitor 1B (p27Kip1), which causes nuclear export and degradation. The encodedprotein is also thought to function in the adult nervous system and the gene has been associated with schizophrenia.Alternative splicing results in multiple transcript variants. (provided by RefSeq, May 2010)
UniProtKB/Swiss-Prot: UHMK1_HUMAN, Q8TAS1Function: Upon serum stimulation, phosphorylates CDKN1B/p27Kip1, thus controlling CDKN1B subcellular location and cellcycle progression in G1 phase. May be involved in trafficking and/or processing of RNA (By similarity)
Gene Wiki entry for UHMK1
|
Genomic Views
for UHMK1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000001.10 NC_018912.1 NT_004487.19
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the UHMK1 gene promoter:
RP58 Pbx1a p53 FOXC1 CBF-A CBF-B FOXO4 CP1A NF-Y CBF(2)
Other transcription factors
Search SABiosciences Chromatin IP Primers for UHMK1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UHMK1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 1q23.3 Ensembl cytogenetic band: 1q23.3 HGNC cytogenetic band: 1q23.1UHMK1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01P162467: view genomic region
(about GC identifiers)
Start:
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162,466,964 bp from pter |
End:
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162,499,419 bp from pter |
Size:
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32,456 bases |
Orientation:
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plus strand |
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Proteins
for UHMK1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: UHMK1_HUMAN, Q8TAS1 (See
protein sequence)Recommended Name: Serine/threonine-protein kinase Kist Size: 419 amino acids; 46546 Da
Subunit: Interacts with stathmin and CDKN1B/p27Kip1 (By similarity). Interacts with PAM
Subcellular location: Nucleus. Note=Mostly nuclear (By similarity)
Secondary accessions: A8K8K4 G3V1M1 Q96C22Alternative splicing: 3 isoforms: Q8TAS1-1 Q8TAS1-2 Q8TAS1-3 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for UHMK1: NX_Q8TAS1
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q8TAS1
UHMK1 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins (3 alternative transcripts):
NP_001171692.1 NP_653225.2 NP_787062.1
ENSEMBL proteins: ENSP00000420270 ENSP00000441226 ENSP00000446416
Human Recombinant Protein Products for UHMK1:
Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view): About this table
UHMK1 for ontologies About GeneDecksing
UHMK1 Antibody Products:
Assay Products for UHMK1: |
Protein
Domains /
Families
for UHMK1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
UHMK1 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q8TAS1ProtoNet protein and cluster: Q8TAS1 1 Blocks protein family: IPB000504 RNA-binding region RNP-1 (RNA recognition motif)
UniProtKB/Swiss-Prot: UHMK1_HUMAN, Q8TAS1Similarity: Belongs to the protein kinase superfamily. Ser/Thr protein kinase familySimilarity: Contains 1 protein kinase domainSimilarity: Contains 1 RRM (RNA recognition motif) domain |
Function
for UHMK1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Molecular Function:
UniProtKB/Swiss-Prot Summary: UHMK1_HUMAN, Q8TAS1Function: Upon serum stimulation, phosphorylates CDKN1B/p27Kip1, thus controlling CDKN1B subcellular location and cellcycle progression in G1 phase. May be involved in trafficking and/or processing of RNA (By similarity)Catalytic activity: ATP + a protein = ADP + a phosphoproteinInduction: By serum growth factors (By similarity) Enzyme Number (IUBMB): EC 2.7.11.11
Gene Ontology (GO): 5/9 molecular function terms (GO ID links to tree view) (see all 9): About this table
UHMK1 for ontologies About GeneDecksing
Phenotypes:
6 GenomeRNAi human phenotypes for UHMK1:
3 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Uhmk1):
UHMK1 for phenotypes About GeneDecksing
Animal Models:
Mouse knock-out Uhmk1tm1Enbl for UHMK1
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UHMK1 (see all 5)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UHMK1 (see all 3)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
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Synthesis Service for UHMK1 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UHMK1 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UHMK1 |
|
Pathways & Interactions
for UHMK1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for UHMK1
STRING Interaction
Network Preview (showing 5 interactants - click image to see more details)
5/18 Interacting proteins for UHMK1 (Q8TAS12, 3 ENSP000004202704) via UniProtKB, MINT, STRING, and/or I2D (see all 18)About this table
Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6): About this table
UHMK1 for ontologies About GeneDecksing
|
Drugs & Compounds
for UHMK1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for UHMK1
2 HMDB Compounds for UHMK1 About this table
Search CenterWatch for drugs/clinical trials and news about UHMK1
|
Transcripts
for UHMK1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for UHMK1 gene (3 alternative transcripts): NM_001184763.1 NM_144624.2 NM_175866.4 Unigene Cluster for UHMK1: U2AF homology motif (UHM) kinase 1 Hs.127310 [show with all ESTs]Unigene Representative Sequence: NM_1758664 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000489294(uc001gcd.3 uc001gcc.2) ENST00000282169 ENST00000545294
ENST00000538489(uc009wuu.2)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UHMK1 (see all 5)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UHMK1 (see all 3)
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector (see all 3): UHMK1 (NM_175866) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for UHMK1 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UHMK1 |
Additional cDNA sequence: AJ536197.1 AK026668.1 AK058195.1 AK292369.1 AL137257.1 BC001977.1 BC014917.1 BC026046.1 BC043436.2 15 DOTS entries: DT.445586 DT.210638 DT.100774200 DT.100774199 DT.97768341 DT.100806356 DT.91764290 DT.100795455 DT.102820450 DT.121421512 DT.91694957 DT.95361924 DT.95361925 DT.121421501 DT.121421503 24/385 AceView cDNA sequences (see all 385): AW197076 AW612743 AA989038 AA830159 AW466879 AW073203 AW574961 AA804492 AI862794 BU902733 BQ929578 NM_144624 AI359727 AV659283 BQ959304 AI249980 BF589910 BM460146 AA255874 BM806200 BG656418 BC026046 CA431112 AK058195
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for UHMK1 About this scheme
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b |
|---|
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| SP1: | | | - | | - | | | | | | | | | | | | | | | | | | |
| SP2: | | | | | | | | | | | | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | - | | | | | |
ECgene alternative splicing isoforms for UHMK1
|
Expression
for UHMK1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| UHMK1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --
About this image
See UHMK1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for UHMK1
SOURCE GeneReport for Unigene cluster: Hs.127310
UniProtKB/Swiss-Prot: UHMK1_HUMAN, Q8TAS1Tissue specificity: Widely expressed, with highest levels in skeletal muscle, kidney, placenta and peripheral bloodleukocytes
SABiosciences Custom PCR Arrays for UHMK1
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UHMK1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat UHMK1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UHMK1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UHMK1 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UHMK1 |
Orthologs
for UHMK1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of chordates.
Orthologs for UHMK1 gene from 4/11 species (see all 11) About this table
ENSEMBL Gene Tree for UHMK1 (if available)
TreeFam Gene Tree for UHMK1 (if available) |
Paralogs
for UHMK1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for UHMK1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 1 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for UHMK1 (162466964 - 162499419 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 3 variations for UHMK1
3 CNVs: 3317 5530 48150 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UHMK1 |
|
Disorders
/ Diseases
for UHMK1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
UHMK1 for disorders About GeneDecksing
OMIM gene information: 608849
OMIM disorders: --
4  diseases for UHMK1: About MalaCardsschizophrenia dracunculiasis leukemia neuronitis
1 disease from the University of Copenhagen DISEASES database for UHMK1:Schizophrenia Human Genome Epidemiology (HuGE) Navigator: UHMK1 (4 documents)
Export disorders for UHMK1 gene to outside databases
|
Publications
for UHMK1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for UHMK1 gene, integrated from 9 sources (see all 25):
(articles sorted by number of sources associating them with UHMK1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Quantitative RT-PCR reveals a ubiquitous but preferentially neural expression of the KIS gene in rat and human. (PubMed id 12782393)1, 2, 3, 9 Bieche I....Maucuer A. (2003)
- A growth factor-dependent nuclear kinase phosphorylates p27(Kip1) and regulates cell cycle progression. (PubMed id 12093740)1, 2, 3 Boehm M.... Nabel E.G. (2002)
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- The novel kinase peptidylglycine alpha-amidating monooxygenase cytosolic interactor protein 2 interacts with the cytosolic routing determinants of the peptide processing enzyme peptidylglycine alpha-amidating monooxygenase. (PubMed id 10574929)1, 2 Caldwell B.D....Mains R.E. (1999)
- Expression of kinase interacting with stathmin (KIS, UHMK1) in human brain and lymphoblasts: Effects of schizophrenia and genotype. (PubMed id 19747464)1, 9 Bristow G.C....Eastwood S.L. (2009)
- FoxM1 regulates growth factor-induced expression of kinase-interacting stathmin (KIS) to promote cell cycle progression. (PubMed id 17984092)1, 9 Petrovic V....Tyner A.L. (2008)
- Confirmation of the genetic association between the U2AF homology motif (UHM) kinase 1 (UHMK1) gene and schizophrenia on chromosome 1q23.3. (PubMed id 18414510)1, 9 Puri V....Gurling H. (2008)
- Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
- Genetic and molecular exploration of UHMK1 in schizoph renic patients. (PubMed id 21399567)1 Dumaine A....Jamain S. (2011)
|
External Searches for UHMK1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing UHMK1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing UHMK1 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing UHMK1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for UHMK1 gene:
Search GeneIP for patents involving UHMK1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for UHMK1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
|
 | |
 | |
 |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat UHMK1 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UHMK1 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UHMK1 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UHMK1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UHMK1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UHMK1 |
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| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UHMK1 |
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