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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

UGT3A2 Gene

protein-coding GIFtS: 49
GCID: GC05M035985

UDP glycosyltransferase 3 family, polypeptide A2

Explore 2 diseases affiliated with
UGT3A2 via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
UDP Glycosyltransferase 3 Family, Polypeptide A2¹ ²
UDPGT 3A2² ³
UDP-Glucuronosyltransferase 3A2²
EC 2.4.1.17³

External Ids:	HGNC: 27266¹	Entrez Gene: 167127²	Ensembl: ENSG00000168671⁷	UniProtKB: Q3SY77³

ORGUL members:
	NONCODE:n409058

Export aliases for UGT3A2 gene to outside databases

Previous GC identifer: GC05M036071

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: UD3A2_HUMAN, Q3SY77

Function: UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are

conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in

the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds (By similarity)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000005.9 NC_018916.1 NT_006576.16

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the UGT3A2 gene promoter:
ARP-1 C/EBPalpha
Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: UGT3A2 promoter sequence

Search SABiosciences Chromatin IP Primers for UGT3A2

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UGT3A2

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5p13.2 Ensembl cytogenetic band: 5p13.2 HGNC cytogenetic band: 5p13.2

UGT3A2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
UGT3A2 gene location

GeneLoc information about chromosome 5 GeneLoc Exon Structure

GeneLoc location for GC05M035985: view genomic region (about GC identifiers)

Start:	36,035,119 bp from pter	End:	36,071,460 bp from pter
Size:	36,342 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UD3A2_HUMAN, Q3SY77 (See protein sequence)

Recommended Name: UDP-glucuronosyltransferase 3A2 precursor

Size: 523 amino acids; 59547 Da

Subcellular location: Membrane; Single-pass type I membrane protein (Potential)

Secondary accessions: B4DUQ7 E9PFK7 Q6UXC4 Q8NBP2

Alternative splicing: 2 isoforms: Q3SY77-1 Q3SY77-2 (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for UGT3A2: NX_Q3SY77

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_Q3SY77

UGT3A2 Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins (2 alternative transcripts):

NP_001161788.1 NP_777574.2

ENSEMBL proteins:

ENSP00000282507 ENSP00000427404 ENSP00000426017 ENSP00000420865 ENSP00000445367

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Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0016021	integral to membrane	IEA	--

UGT3A2 for ontologies About GeneDecksing

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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

UGT3A2 for domains About GeneDecksing

1 InterPro domain/family:

IPR002213 UDP_glucos_trans

Graphical View of Domain Structure for InterPro Entry Q3SY77

ProtoNet protein and cluster: Q3SY77

1 Blocks protein family: IPB002213 UDP-glucoronosyl/UDP-glucosyl transferase

UniProtKB/Swiss-Prot: UD3A2_HUMAN, Q3SY77

Similarity: Belongs to the UDP-glycosyltransferase family

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

UniProtKB/Swiss-Prot: UD3A2_HUMAN, Q3SY77

Function: UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are

conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in

the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds (By similarity)

Catalytic activity: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside

Enzyme Number (IUBMB): EC 2.4.1.17¹

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Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0015020	glucuronosyltransferase activity	IEA	--
GO:0016758	transferase activity, transferring hexosyl groups	--	--

UGT3A2 for ontologies About GeneDecksing

1 GenomeRNAi human phenotype for UGT3A2:

Increased cell number in G2M,

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for UGT3A2

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for UGT3A2
Search CenterWatch for drugs/clinical trials and news about UGT3A2 / UD3A2

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
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About This Section

REFSEQ mRNAs for UGT3A2 gene (2 alternative transcripts):

NM_001168316.1 NM_174914.3

Unigene Cluster for UGT3A2:

UDP glycosyltransferase 3 family, polypeptide A2

Hs.348941 [show with all ESTs]

Unigene Representative Sequence: NM_174914

6 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000282507(uc003jjz.2 uc011cos.2 uc011cot.2) ENST00000513300

ENST00000504685 ENST00000504954 ENST00000515131 ENST00000545528

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Additional cDNA sequence:

AK075383.1 AK300751.1 AK303154.1 AY358416.1 BC103924.1 BC103925.1 NR_031764.1

3 DOTS entries:

DT.204327 DT.120841517 DT.75100675

17 AceView cDNA sequences:

NM_174914 AK075383 AY358416 F06529 CB158774 BQ216829 AI917116 CD050395

AI580389 AA633698 Z39483 BP431975 BP431877 BF510946 R19994 AA715548

BI827790

GeneLoc Exon Structure

3 Alternative Splicing Database (ASD) splice patterns (SP) for UGT3A2 About this scheme

ExUns:	1	^	2	^	3	^	4	^	5a	·	5b	^	6a	·	6b	^	7	^	8
SP1:
SP2:
SP3:									-		-

ECgene alternative splicing isoforms for UGT3A2

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

UGT3A2 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GAGACTGTAG

About this image

UGT3A2 expression in embryonic tissues and stem cells

Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine About this table

Stem Cell Differentiation: 1 LifeMap Cell

Name

Category

Primitive gut tube-like cells (A scalable, suspensi...)

Expression:

Positive

Negative

Selective marker

Experimental details:

Curated

Microarrays

In-situ hybridization

See UGT3A2 Protein Expression from SPIRE MOPED and PaxDB
SOURCE GeneReport for Unigene cluster: Hs.348941

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In Situ
Assay Products:

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(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for UGT3A2 gene from 3/11 species (see all 11) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
mouse (Mus musculus)	Mammalia	Ugt3a2⁵ Ugt3a1¹	UDP glycosyltransferases 3 family, polypeptide A2⁵ UDP glycosyltransferases 3 family, polypeptide A1¹	74.47(n)¹ 66.03(a)¹		15 (4.01 cM)⁵ 105887¹ NM_207216.2¹ NP_997099.2¹ 9335550⁵
lizard (Anolis carolinensis)	Reptilia	--	--	47(a)	1 → many	GL343241.1(1595150-1604610)
zebrafish (Danio rerio)	Actinopterygii	ugt5a2⁶ ugt5a5⁶ (see all 16)	UDP glucuronosyltransferase 5 family, polypeptide ... UDP glucuronosyltransferase 5 family, polypeptide ... (see all 16)	29(a) 29(a) (see all 16)	possible ortholog possible ortholog (see all 16)	25(30390879-30405001) 25(30363045-30364920)

ENSEMBL Gene Tree for UGT3A2 (if available)
TreeFam Gene Tree for UGT3A2 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

Paralogs for UGT3A2 gene

UGT2A2² UGT1A8² UGT1A7² UGT3A1² UGT2B7² UGT2B11² UGT1A3² UGT1A1²

UGT1A5² UGT2B10² UGT1A10² UGT1A6² UGT8² UGT2B15² UGT2B4² UGT2B17²

UGT2A3² UGT2B28² UGT1A9² UGT1A4²

18/25 SIMAP similar genes for UGT3A2 using alignment to 4 protein entries: UD3A2_HUMAN (see all proteins) (see all similar genes):

UGT3A1 UGT1A3S UGT1A9S UGT2B7 UGT2A3 UGT2B10

UGT8 BILIQTL1 UGT2B15 UGT1A6 UGT2B17 UGT2B4

UGT1A5 UGT1A1 UGT1A3 UGT1A4 UGT1A4S UGT1A8

UGT3A2 for paralogs About GeneDecksing

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 5 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs78829382^1,2	F,	--	36034629(+)	`TGGTCT/CCTCAA`	3	--	ds500¹		1		EA	120
rs76689341^1,2	F,	--	36034639(+)	`AGGAAA/CAACAT`	3	--	ds500¹		1		EA	120
rs116739708^1,2	F,	--	36034666(+)	`AAACAC/TAGCTA`	3	--	ds500¹		1		WA	118
rs79975553^1,2	F,	--	36034714(+)	`GCTCTA/GTGATT`	3	--	ds500¹		1		EA	120
rs142440503^1,2		--	36034745(+)	`CCTACC/TTCAGC`	3	--	ds500¹		0	--	--	--	--
rs76313309^1,2	F,	--	36034761(+)	`CAACAC/GACTTA`	3	--	ds500¹		1		EA	120
rs2561571^1,2	H	--	36034785(+)	`GCCAAT/CTCAGT`	3	--	ds500¹		4		NS EA	416
rs151319611^1,2		--	36034850(+)	`CAGCAG/TGCCCA`	3	--	ds500¹		0	--	--	--	--
rs139783064^1,2		--	36034854(+)	`ATGCCC/TATGAT`	3	--	ds500¹		0	--	--	--	--
rs13167553^1,2	C,F,H,	--	36034866(+)	`GCTTGC/TTGCTT`	3	--	ds500¹		6		NS EA NA	542

HapMap Linkage Disequilibrium report for UGT3A2 (36035119 - 36071460 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for UGT3A2
1 CNV: 7498

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

UGT3A2 for disorders About GeneDecksing

2 diseases for UGT3A2: About MalaCards

kernicterus fascioliasis

3 diseases from the University of Copenhagen DISEASES database for UGT3A2:

Fascioliasis Kernicterus Gilbert syndrome

Human Genome Epidemiology (HuGE) Navigator: UGT3A2 (1 document)

Export disorders for UGT3A2 gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for UGT3A2 gene integrated from 9 sources:
(articles sorted by number of sources associating them with UGT3A2)

Utopia: connect your pdf to the dynamic
world of online information

The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309)^{1, 2, 3} Clark H.F.... Gray A.M. (2003)
Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743)^{1, 2} Otsuki T....Isogai T. (2005)
Identification of residues that confer sugar selectivi ty to UDP-glycosyltransferase 3A (UGT3A) enzymes. (PubMed id 22621930)¹ Meech R....Mackenzie P.I. (2012)
MicroRNA-related genetic variations as predictors for risk of second primary tumor and/or recurrence in patients with early-stage he ad and neck cancer. (PubMed id 20819778)¹ Zhang X....Wu X. (2010)
The consensus coding sequences of human breast and colorectal cancers. (PubMed id 16959974)² Sjoeblom T.... Velculescu V.E. (2006)
Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)¹ Kimura K.... Sugano S. (2006)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)² Gerhard D.S....Malek J. (2004)
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)² Ota T.... Sugano S. (2004)
The DNA sequence and comparative analysis of human chromosome 5. (PubMed id 15372022)² Schmutz J.... Rubin E.M. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 167127	HGNC: 27266	AceView: LOC167127	Ensembl:ENSG00000168671	euGenes: HUgn167127
ECgene: UGT3A2	H-InvDB: UGT3A2

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for UGT3A2	Pharmacogenomics, SNPs, Pathways

Intellectual Property for UGT3A2 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for UGT3A2 gene:
Search GeneIP for patents involving UGT3A2

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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About This Section


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GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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Category			VWF (GIFTS: 73) von Willebrand factor
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UGT3A2 Gene

UDP glycosyltransferase 3 family, polypeptide A2

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UGT3A2 Gene

UDP glycosyltransferase 3 family, polypeptide A2

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