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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

UGT3A1 Gene

protein-coding GIFtS: 47
GCID: GC05M035951

UDP glycosyltransferase 3 family, polypeptide A1

Explore 2 diseases affiliated with
UGT3A1 via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
UDP Glycosyltransferase 3 Family, Polypeptide A1¹ ²
UDPGT 3A1² ³
EC 2.4.1.17³ ⁸
FLJ34658¹
UDP-Glucuronosyltransferase 3A1²
EC 2.4.1⁸

External Ids:	HGNC: 26625¹	Entrez Gene: 133688²	Ensembl: ENSG00000145626⁷	UniProtKB: Q6NUS8³

Export aliases for UGT3A1 gene to outside databases

Previous GC identifers: GC05M035989 GC05M035903

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: UD3A1_HUMAN, Q6NUS8

Function: UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are

conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in

the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds (By similarity)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000005.9 NC_018916.1 NT_006576.16

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the UGT3A1 gene promoter:
IRF-7A
Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: UGT3A1 promoter sequence

Search SABiosciences Chromatin IP Primers for UGT3A1

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UGT3A1

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5p13.2 Ensembl cytogenetic band: 5p13.2 HGNC cytogenetic band: 5p13.2

UGT3A1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
UGT3A1 gene location

GeneLoc information about chromosome 5 GeneLoc Exon Structure

GeneLoc location for GC05M035951: view genomic region (about GC identifiers)

Start:	35,951,112 bp from pter	End:	36,001,130 bp from pter
Size:	50,019 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UD3A1_HUMAN, Q6NUS8 (See protein sequence)

Recommended Name: UDP-glucuronosyltransferase 3A1 precursor

Size: 523 amino acids; 59151 Da

Subcellular location: Membrane; Single-pass type I membrane protein (Potential)

Secondary accessions: G5E961 Q8IYS9 Q8NAW4 Q96DM6

Alternative splicing: 2 isoforms: Q6NUS8-1 Q6NUS8-2 (No experimental confirmation available. Ref.2 (AAH35012) sequence is in conflict in position: 251:W->R)

Explore the universe of human proteins at neXtProt for UGT3A1: NX_Q6NUS8

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_Q6NUS8

2 DME Specific Peptides for UGT3A1 (Q6NUS8)

PAQRLVG

AFAHLPQGV

UGT3A1 Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins (2 alternative transcripts):

NP_001165344.1 NP_689617.3

ENSEMBL proteins:

ENSP00000274278 ENSP00000427630 ENSP00000427079 ENSP00000426100 ENSP00000328033

Human Recombinant Protein Products:

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	Uscn Proteins for UGT3A1

Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0016021	integral to membrane	IEA	--

UGT3A1 for ontologies About GeneDecksing

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	Uscn ELISAs and CLIAs for UGT3A1

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

UGT3A1 for domains About GeneDecksing

1 InterPro domain/family:

IPR002213 UDP_glucos_trans

Graphical View of Domain Structure for InterPro Entry Q6NUS8

ProtoNet protein and cluster: Q6NUS8

1 Blocks protein family: IPB002213 UDP-glucoronosyl/UDP-glucosyl transferase

UniProtKB/Swiss-Prot: UD3A1_HUMAN, Q6NUS8

Similarity: Belongs to the UDP-glycosyltransferase family

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

UniProtKB/Swiss-Prot: UD3A1_HUMAN, Q6NUS8

Function: UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are

conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in

the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds (By similarity)

Catalytic activity: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside

Enzyme Numbers (IUBMB): EC 2.4.1.17¹ ² EC 2.4.1²

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In Situ Assay
Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UGT3A1

Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0015020	glucuronosyltransferase activity	IEA	--
GO:0016758	transferase activity, transferring hexosyl groups	--	--

UGT3A1 for ontologies About GeneDecksing

1 GenomeRNAi human phenotype for UGT3A1:

Synthetic lethal with Ras

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for UGT3A1

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for UGT3A1

2 DrugBank Compounds for UGT3A1 About this table

Compound	Synonyms	CAS #	Type	Actions	PubMed Ids
Kaempherol	--	520-18-3	target	--	10592235
Quercetin	--	117-39-5	target	--	10592235

Search CenterWatch for drugs/clinical trials and news about UGT3A1 / UD3A1

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for UGT3A1 gene (2 alternative transcripts):

NM_001171873.1 NM_152404.3

Unigene Cluster for UGT3A1:

UDP glycosyltransferase 3 family, polypeptide A1

Hs.254699 [show with all ESTs]

Unigene Representative Sequence: AK125803

6 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000274278(uc003jjv.2) ENST00000515801(uc003jjw.2 uc011coq.2 uc011cor.2)

ENST00000503189 ENST00000507113 ENST00000513233 ENST00000333811(uc003jjy.2)

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		QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UGT3A1

Clone Products:		OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UGT3A1 (see all 2) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UGT3A1 (see all 2) OriGene custom cloning services � gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
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Additional cDNA sequence:

AK057066.1 AK091977.1 AK125803.1 AK290809.1 AK296136.1 AK303770.1 AK308046.1 AK315851.1

BC035012.1 BC068446.1

5 DOTS entries:

DT.40129342 DT.75101467 DT.95267320 DT.100031080 DT.120853522

24/42 AceView cDNA sequences (see all 42):

AI672388 AI671780 BX955526 AI492912 AW235540 AK125803 AI373521 AI613123

AI014966 BG431950 BU621010 AW188229 AK057066 BC068446 BC035012 BX951484

AI767712 AK091977 AA970255 AX747286 BI463768 AI425081 AI433413 BX104774

GeneLoc Exon Structure

3 Alternative Splicing Database (ASD) splice patterns (SP) for UGT3A1 About this scheme

ExUns:	1a	·	1b	·	1c	^	2	^	3	^	4	^	5a	·	5b	^	6	^	7a	·	7b	^	8
SP1:															-
SP2:					-								-		-						-
SP3:

ECgene alternative splicing isoforms for UGT3A1

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

UGT3A1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --

About this image
See UGT3A1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for UGT3A1

SOURCE GeneReport for Unigene cluster: Hs.254699

SABiosciences Expression via Pathway-Focused PCR Array including UGT3A1:

Drug Metabolism: Phase II Enzymes in human mouse rat

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In Situ
Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UGT3A1

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for UGT3A1 gene from 3/9 species (see all 9) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
lizard (Anolis carolinensis)	Reptilia	--	--	47(a)	1 → many	GL343241.1(1595150-1604610)
tropical clawed frog (Xenopus tropicalis)	Amphibia	CF218052.1²	--	70.99(n)		CF218052.1
zebrafish (Danio rerio)	Actinopterygii	ugt5a4⁶ ugt5a2⁶ (see all 16)	UDP glucuronosyltransferase 5 family, polypeptide ... UDP glucuronosyltransferase 5 family, polypeptide ... (see all 16)	29(a) 29(a) (see all 16)	possible ortholog possible ortholog (see all 16)	25(30371448-30404695) 25(30390879-30405001)

ENSEMBL Gene Tree for UGT3A1 (if available)
TreeFam Gene Tree for UGT3A1 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

Paralogs for UGT3A1 gene

UGT2A2² UGT1A8² UGT1A7² UGT2B7² UGT2B11² UGT1A3² UGT1A1² UGT1A5²

UGT3A2² UGT2B10² UGT1A10² UGT1A6² UGT8² UGT2B15² UGT2B4² UGT2B17²

UGT2A3² UGT2B28² UGT1A9² UGT1A4²

18/26 SIMAP similar genes for UGT3A1 using alignment to 5 protein entries: UD3A1_HUMAN (see all proteins) (see all similar genes):

UGT3A2 UGT1A9S UGT1A3S UGT8 UGT2B10 UGT2B4

UGT2B15 UGT1A8S UGT2A3 UGT2B11 UGT2B28 UGT2B7

UGT1A5 UGT2B17 UGT1A10 UGT2A1 BILIQTL1 UGT1A3

UGT3A1 for paralogs About GeneDecksing

1 Pseudogenes.org Pseudogene for UGT3A1
PGOHUM00000235188

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 5 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs183310978^1,2		--	35952799(+)	`CCTTCA/GTGGGA`	1	--	int¹		0	--	--	--	--
rs144804843^1,2		--	35952808(+)	`GAGTAC/TGGCCA`	1	--	int¹		0	--	--	--	--
rs148528693^1,2		--	35952868(+)	`TTATAC/TGCACA`	1	--	int¹		0	--	--	--	--
rs186891283^1,2		--	35952869(+)	`TATACA/GCACAC`	1	--	int¹		0	--	--	--	--
rs142891495^1,2		--	35952903(+)	`TCTGCA/GTGCTT`	1	--	int¹		0	--	--	--	--
rs111506939^1,2		--	35952926(+)	`TCTTGC/TGTCAT`	1	--	int¹		1		CSA	1
rs184310339^1,2		--	35952958(+)	`ACATCC/TAGCAC`	1	--	int¹		0	--	--	--	--
rs187201320^1,2		--	35952980(+)	`GACTCG/TCAAGC`	1	--	int¹		0	--	--	--	--
rs192818272^1,2		--	35953009(+)	`GGCAAA/CGTTTT`	1	--	int¹		0	--	--	--	--
rs6451245^1,2	C,F,A,H,	--	35953097(+)	`TTTCAT/CAATTC`	1	--	int¹		11		NA WA EA	508

HapMap Linkage Disequilibrium report for UGT3A1 (35951112 - 36001130 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for UGT3A1
1 CNV: 0062

SABiosciences Cancer Mutation PCR Assays

QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UGT3A1

DNA2.0 Custom Variant and Variant Library Synthesis for UGT3A1

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

UGT3A1 for disorders About GeneDecksing

2 diseases for UGT3A1: About MalaCards

kernicterus fascioliasis

1 disease from the University of Copenhagen DISEASES database for UGT3A1:

Fascioliasis

Human Genome Epidemiology (HuGE) Navigator: UGT3A1 (2 documents)

Export disorders for UGT3A1 gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for UGT3A1 gene integrated from 9 sources:
(articles sorted by number of sources associating them with UGT3A1)

Utopia: connect your pdf to the dynamic
world of online information

Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)^{1, 2} Ota T.... Sugano S. (2004)
Identification of residues that confer sugar selectivi ty to UDP-glycosyltransferase 3A (UGT3A) enzymes. (PubMed id 22621930)¹ Meech R....Mackenzie P.I. (2012)
Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)¹ Rose J.E....Uhl G.R. (2010)
Investigation of genetic susceptibility factors for h uman longevity - A targeted nonsynonymous SNP study. (PubMed id 20800603)¹ Flachsbart F....Nebel A. (2010)
UGT3A: novel UDP-glycosyltransferases of the UGT supe rfamily. (PubMed id 19814657)¹ Meech R. and Mackenzie P.I. (2010)
Identification of UDP glycosyltransferase 3A1 as a UDP N-acetylglucosaminyltransferase. (PubMed id 18981171)¹ Mackenzie P.I....Meech R. (2008)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)² Gerhard D.S....Malek J. (2004)
The DNA sequence and comparative analysis of human chromosome 5. (PubMed id 15372022)² Schmutz J.... Rubin E.M. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)
The Protein Data Bank. (PubMed id 10592235)⁷ Berman H.M....Bourne P.E. (2000)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 133688	HGNC: 26625	AceView: FLJ34658	Ensembl:ENSG00000145626	euGenes: HUgn133688
ECgene: UGT3A1	H-InvDB: UGT3A1

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for UGT3A1	Pharmacogenomics, SNPs, Pathways

Intellectual Property for UGT3A1 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for UGT3A1 gene:
Search GeneIP for patents involving UGT3A1

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

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GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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Category			VWF (GIFTS: 73) von Willebrand factor
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UGT3A1 Gene

UDP glycosyltransferase 3 family, polypeptide A1

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UGT3A1 Gene

UDP glycosyltransferase 3 family, polypeptide A1

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