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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

UGGT1 Gene

protein-coding   GIFtS: 60
GCID: GC02P128848

UDP-glucose glycoprotein glucosyltransferase 1

(Previous name: UDP-glucose ceramide glucosyltransferase-like 1 )
(Previous symbol: UGCGL1)
 Explore 3 diseases affiliated with
UGGT1 via our new
 Human Malady Compendium 
Biological research products
for UGGT1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
UDP-Glucose Glycoprotein Glucosyltransferase 11 2     EC 2.4.1.-3
UGCGL11 2 3     GT3
UDP-Glucose Ceramide Glucosyltransferase-Like 11 2 3     UGGT3
HUGT11 2 5     UGTR3
UGT12 3     HUGT11 2 5
UDP--Glc:Glycoprotein Glucosyltransferase2 3     EC 2.4.18
UDP-Glucose:Glycoprotein Glucosyltransferase 12     

External Ids:    HGNC: 156631   Entrez Gene: 568862   Ensembl: ENSG000001367317   OMIM: 6058975   UniProtKB: Q9NYU23   
ORGUL members:         
NONCODE:n407958    

Export aliases for UGGT1 gene to outside databases

Previous GC identifers: GC02P128566 GC02P121155


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for UGGT1:
UDP-glucose:glycoprotein glucosyltransferase (UGT) is a soluble protein of the endoplasmic reticulum (ER) that
selectively reglucosylates unfolded glycoproteins, thus providing quality control for protein transport out of the
ER.(supplied by OMIM, Oct 2009)

UniProtKB/Swiss-Prot: UGGG1_HUMAN, Q9NYU2
Function: Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part
of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated
proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_022135.16  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for UGGT1
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidUGGT1 promoter sequence
   Search SABiosciences Chromatin IP Primers for UGGT1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UGGT1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q14.3   Ensembl cytogenetic band:  2q14.3   HGNC cytogenetic band: 2q14.3

UGGT1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
UGGT1 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02P128848:  view genomic region     (about GC identifiers)

Start:
128,848,754 bp from pter      End:
128,953,251 bp from pter
Size:
104,498 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UGGG1_HUMAN, Q9NYU2 (See protein sequence)
Recommended Name: UDP-glucose:glycoprotein glucosyltransferase 1 precursor  
Size: 1555 amino acids; 177190 Da
Cofactor: Calcium or manganese
Subunit: Monomer as well as in a tight complex with SEP15 (By similarity)
Subcellular location: Endoplasmic reticulum lumen. Endoplasmic reticulum-Golgi intermediate compartment
Sequence caution: Sequence=AAY14885.1; Type=Erroneous gene model prediction; Sequence=BAB14632.1; Type=Erroneous
initiation;
Secondary accessions: Q53QP2 Q53SL3 Q8IW30 Q9H8I4
Alternative splicing: 2 isoforms:  Q9NYU2-1   Q9NYU2-2   

Explore the universe of human proteins at neXtProt for UGGT1: NX_Q9NYU2

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9NYU2

  • 4/20 DME Specific Peptides for UGGT1 (Q9NYU2) (see all 20)
     LQDLSFQ  AKTIDLC  VDTIVMA  NLDQDLPN 

    UGGT1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_064505.1  
    ENSEMBL proteins: 
     ENSP00000400426   ENSP00000392701   ENSP00000365913   ENSP00000259253   ENSP00000389441  
     ENSP00000365158  
    Reactome Protein details: Q9NYU2
    Human Recombinant Protein Products: 
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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for UGGT1

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005783endoplasmic reticulum IDA10694380
    GO:0005788endoplasmic reticulum lumen TAS--
    GO:0005793endoplasmic reticulum-Golgi intermediate compartment ISS--


    UGGT1 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for UGGT1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    UGGT1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR009448 UDP-g_GGtrans

    Graphical View of Domain Structure for InterPro Entry Q9NYU2

    ProtoNet protein and cluster: Q9NYU2

    1 Blocks protein family: IPB009448 UDP-glucose:Glycoprotein Glucosyltransferase

    UniProtKB/Swiss-Prot: UGGG1_HUMAN, Q9NYU2
    Domain: The N-terminal non-catalytic domain is assumed to mediate recognition of proteins with partial folding defects
    (By similarity)
    Similarity: Belongs to the glycosyltransferase 8 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: UGGG1_HUMAN, Q9NYU2
    Function: Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part
    of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated
    proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation
    Induction: By tunicamycin and A23187. Induced 3-4 fold 10 hours after treatment

    Enzyme Numbers (IUBMB): EC 2.4.12 EC 2.4.1.-1

    miRNA
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    hsa-miR-579 hsa-miR-4291 hsa-miR-361-5p hsa-miR-607 hsa-let-7d hsa-miR-624* hsa-miR-3921 hsa-miR-570
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UGGT1

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003980UDP-glucose:glycoprotein glucosyltransferase activity IDA10694380
    GO:0005515protein binding ----
    GO:0051082unfolded protein binding IDA10694380


    UGGT1 for ontologies           About GeneDecksing


    5 GenomeRNAi human phenotypes for UGGT1:
     G0/1 arrest  Increased G1 DNA content  Increased Salmonella enterica   Increased Salmonella enterica  
     Increased Salmonella enterica  


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Calnexin/calreticulin cycle
    Calnexin/calreticulin cycle1.00
    ER Quality Control Compartment (ERQC)0.55
    N-glycan trimming in the ER and Calnexin/Calreticulin cycle0.85
    2Asparagine N-linked glycosylation
    Asparagine N-linked glycosylation1.00
    Metabolism of proteins0.15
    Post-translational protein modification0.44
    3Protein processing in endoplasmic reticulum
    Protein processing in endoplasmic reticulum1.00
    4Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)
    CFTR folding and maturation (norm and CF)0.37

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 GeneGo (Thomson Reuters) Pathway for UGGT1
        CFTR folding and maturation (norm and CF)

    5/6        Reactome Pathways for UGGT1 (see all 6)
        Asparagine N-linked glycosylation
    N-glycan trimming in the ER and Calnexin/Calreticulin cycle
    Calnexin/calreticulin cycle
    Metabolism of proteins
    Post-translational protein modification


    1         Kegg Pathway  (Kegg details for UGGT1):
        Protein processing in endoplasmic reticulum

    UniProtKB/Swiss-Prot: UGGG1_HUMAN, Q9NYU2
    Pathway: Protein modification; protein glycosylation


    UGGT1 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for UGGT1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 19)

    5/43 Interacting proteins for UGGT1 (Q9NYU23 ENSP000002592534) via UniProtKB, MINT, STRING, and/or I2D (see all 43)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    ENSG00000206505P304503, ENSP000003731144I2D: score=1 I2D: score=1 STRING: ENSP00000373114
    HLA-AP304433I2D: score=1 I2D: score=1 I2D: score=1 
    ENSG00000206435P305043I2D: score=1 
    ENSG00000206452P305043I2D: score=1 
    HLA-CP305043I2D: score=1 
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006457protein folding TAS--
    GO:0018279protein N-linked glycosylation via asparagine TAS--
    GO:0043687post-translational protein modification TAS--
    GO:0044267cellular protein metabolic process TAS--
    GO:0051084'de novo' posttranslational protein folding TAS10694380


    UGGT1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    UGGT1 for compounds           About GeneDecksing

    EMD Millipore small molecules for UGGT1:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for UGGT1

    2 HMDB Compounds for UGGT1    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    Manganesemanganese 7439-96-5--
    3 Novoseek chemical compound relationships for UGGT1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    udpglucose 92.3 19 11283335 (3), 16154739 (1), 19470663 (1), 19466607 (1) (see all 15)
    polysaccharide 57.4 8 14730348 (3), 12671684 (2), 19222173 (1), 17304538 (1)
    glucose 22.5 7 12671684 (2), 19222173 (1), 12913004 (1), 14632257 (1) (see all 5)

    Search CenterWatch for drugs/clinical trials and news about UGGT1 / UGGG1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for UGGT1 gene (2 alternative transcripts): 
    NM_001025777.1  NM_020120.3  

    Unigene Cluster for UGGT1:

    UDP-glucose glycoprotein glucosyltransferase 1
    Hs.743306  [show with all ESTs]
    Unigene Representative Sequence: NR_027671
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000430075 ENST00000438277(uc010fme.1) ENST00000376723 ENST00000259253
    ENST00000488439 ENST00000418197 ENST00000465836 ENST00000375990(uc002tps.3 uc002tpr.3)


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    8/59 QIAGEN miScript miRNA Assays for microRNAs that regulate UGGT1 (see all 59):
    hsa-miR-579 hsa-miR-4291 hsa-miR-361-5p hsa-miR-607 hsa-let-7d hsa-miR-624* hsa-miR-3921 hsa-miR-570
    SwitchGear 3'UTR luciferase reporter plasmidUGGT1 3' UTR sequence
    Inhib. RNA
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    Additional cDNA sequence: 

    AF227905.1 AK023240.1 AK023671.1 AK074251.1 AK074376.1 AK293066.1 AK309101.1 BC041098.1 
    BC047727.1 NR_027671.2 

    16 DOTS entries:

    DT.408761  DT.100790543  DT.422860  DT.40279255  DT.105982  DT.95156634  DT.101974259  DT.92008224 
    DT.100737979  DT.120984571  DT.305778  DT.91742067  DT.92002021  DT.92427719  DT.95155165  DT.95265020 

    24/182 AceView cDNA sequences (see all 182):

    BQ932226 AA554920 BP359091 AA279242 AA926726 AW135426 CB152902 CB215567 
    BC047727 AF227905 BF592808 AI080983 AI655525 AA279123 AA810550 AA847178 
    BE550513 BX475218 AU132160 AI655867 CD106217 BU623794 BM040793 AW002565 

    GeneLoc Exon Structure

    5/9 Alternative Splicing Database (ASD) splice patterns (SP) for UGGT1 (see all 9)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19a · 19b ^ 20 ^
    SP1:                                      -                                                                                                     -               
    SP2:                          -           -                                                                                                     -               
    SP3:                                                                                                                                                            
    SP4:                    -     -                                                                                                                                 
    SP5:                                                                                                                                                            

    ExUns: 21 ^ 22 ^ 23 ^ 24a · 24b ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35 ^ 36 ^ 37 ^ 38a · 38b ^ 39 ^ 40 ^ 41a · 41b · 41c · 41d ^
    SP1:                                                        -                                                                                               -   
    SP2:                                                        -                                                                                               -   
    SP3:                                                                                                                                                        -   
    SP4:                                                                                                                                                            
    SP5:        -                                                                                                                                                   

    ExUns: 42a · 42b ^ 43a · 43b · 43c
    SP1:  -                           
    SP2:  -                           
    SP3:  -                           
    SP4:                              
    SP5:                              


    ECgene alternative splicing isoforms for UGGT1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    UGGT1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTTTCCAACC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See UGGT1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for UGGT1

    SOURCE GeneReport for Unigene cluster: Hs.743306

    UniProtKB/Swiss-Prot: UGGG1_HUMAN, Q9NYU2
    Tissue specificity: Higher levels in pancreas, skeletal muscle, kidney, and brain. Low levels in lung and heart

        SABiosciences Expression via Pathway-Focused PCR Arrays including UGGT1: 
              Glycosylation in human mouse rat
              Unfolded Protein Response in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for UGGT1 gene from 7/29 species (see all 29)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves UGGT11 UDP-glucose glycoprotein glucosyltransferase 1 78.49(n)
    85.84(a)
      424757  XM_422579.3  XP_422579.3 
    lizard
    (Anolis carolinensis)
    Reptilia UGGT16
    --
    85(a)
    1 ↔ 1
    3(36414884-36468901)
    zebrafish
    (Danio rerio)
    Actinopterygii BG304166.12   -- 79.58(n)    BG304166.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Ugt1 UDP-glucose-glycoprotein glucosyltransferase 51.17(n)
    45.75(a)
      40055  NM_079427.2  NP_524151.2 
    worm
    (Caenorhabditis elegans)
    Secernentea uggt-16
    uggt-26
    --
    42(a)
    37(a)
    many ↔ many
    many ↔ many
    X(7495640-7500939)
    I(9317728-9327204)
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons EBS11 UDP-glucose:glycoprotein glucosyltransferase 48.32(n)
    39.22(a)
      843462  NM_105791.4  NP_177278.3 
    rice
    (Oryza sativa)
    Liliopsida Os.59002 Oryza sativa (japonica cultivar-group) cDNA clone0 more 73.73(n)    AK059298.1 


    ENSEMBL Gene Tree for UGGT1 (if available)
    TreeFam Gene Tree for UGGT1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for UGGT1 gene
    UGGT22  
    1 SIMAP similar gene for UGGT1 using alignment to 6 protein entries:     UGGG1_HUMAN (see all proteins):
    UGGT2

    UGGT1 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1987 NCBI SNPs in UGGT1 are shown (see all 1987    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1407506531,2
    --128846765(+) CCAGTA/GAAACA 1 -- us2k10--------
    rs1432787921,2
    --128846821(+) TTCCAA/CATAAG 2 -- us2k10--------
    rs1161908551,2
    C,F,--128846826(+) AATAAG/TATCCT 2 -- us2k11Minor allele frequency- T:0.02WA 118
    rs1466851731,2
    --128846916(+) TAAACG/TGCAAG 2 -- us2k10--------
    rs1817160191,2
    --128846921(+) TGCAAA/GGATGT 2 -- us2k10--------
    rs1150773091,2
    F,--128846952(+) ACATGC/ACAAAG 2 -- us2k11Minor allele frequency- A:0.02WA 118
    rs344666231,2
    C,--128847046(+) TAAAGT/-TTTTT 2 -- us2k11Minor allele frequency- -:0.50CSA 2
    rs611151781,2
    C--128847047(+) TTTTTT/-CTTTT 2 -- us2k11Minor allele frequency- -:0.50NA 2
    rs1839575711,2
    --128847113(+) CATATG/TCACAT 2 -- us2k10--------
    rs1165835921,2
    F,--128847206(+) CTAGAG/ACCCTC 2 -- us2k11Minor allele frequency- A:0.03WA 118

    HapMap Linkage Disequilibrium report for UGGT1 (128848754 - 128953251 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 8 variations for UGGT1
         7 Indels: 61818 45851 42110 58916 26436 40359 97974
         1 Inversion: 37211

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    UGGT1 for disorders           About GeneDecksing

    OMIM gene information: 605897    OMIM disorders: --

    3 diseases for UGGT1:    About MalaCards
    dysentery    sleeping sickness    hepatitis


    Export disorders for UGGT1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for UGGT1 gene, integrated from 9 sources (see all 42):
    (articles sorted by number of sources associating them with UGGT1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Two homologues encoding human UDP-glucose:glycoprotein glucosyltransferase differ in mRNA expression and enzymatic activity. (PubMed id 10694380)1, 2, 3, 9 Arnold S.M.... Kaufman R.J. (2000)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. The noncatalytic portion of human UDP-glucose: glycoprotein glucosyltransferase I confers UDP-glucose binding and transferase function to the catalytic domain. (PubMed id 12913004)1, 9 Arnold S.M. and Kaufman R.J. (2003)
    5. The role of UDP-Glc:glycoprotein glucosyltransferase 1 in the maturation of an obligate substrate prosaposin. (PubMed id 20498017)1, 9 Pearse B.R....Hebert D.N. (2010)
    6. Identification of HUGT1 as a potential BiP activator and a cellular target for improvement of recombinant protein production using a cDNA screening system. (PubMed id 19466607)1, 9 Ku S.C....Chao S.H. (2009)
    7. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)
    8. Charting the landscape of tandem BRCT domain-mediated protein interactions. (PubMed id 22990118)1 Woods N.T....Monteiro A.N. (2012)
    9. Protein interaction profiling of the p97 adaptor UBXD1 points to a role for the complex in modulating ERGIC-53 trafficking. (PubMed id 22337587)1 Haines D.S....Deshaies R.J. (2012)
    10. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 56886 HGNC: 15663 AceView: UGCGL1 Ensembl:ENSG00000136731 euGenes: HUgn56886
    ECgene: UGGT1 Kegg: 56886 H-InvDB: UGGT1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for UGGT1 Pharmacogenomics, SNPs, Pathways
    GGDBhttp://riodb.ibase.aist.go.jp/rcmg/ggdb/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for UGGT1 gene:
    Search GeneIP for patents involving UGGT1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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