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Aliases for UGDH-AS1 Gene

Subcategory (RNA class) for UGDH-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UGDH-AS1 Gene

  • UGDH Antisense RNA 1 2 3 5
  • UGDH Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UGDH-AS1 Gene

Summaries for UGDH-AS1 Gene

GeneCards Summary for UGDH-AS1 Gene

UGDH-AS1 (UGDH Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UGDH-AS1 Gene

Genomics for UGDH-AS1 Gene

Genomic Location for UGDH-AS1 Gene

Chromosome:
4
Start:
39,527,839 bp from pter
End:
39,594,707 bp from pter
Size:
66,869 bases
Orientation:
Plus strand

Genomic View for UGDH-AS1 Gene

Genes around UGDH-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UGDH-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UGDH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UGDH-AS1 Gene

No data available for Regulatory Elements for UGDH-AS1 Gene

Proteins for UGDH-AS1 Gene

Post-translational modifications for UGDH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UGDH-AS1 Gene

Domains & Families for UGDH-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UGDH-AS1 Gene

Function for UGDH-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UGDH-AS1 Gene

Localization for UGDH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UGDH-AS1 Gene

Pathways & Interactions for UGDH-AS1 Gene

SuperPathways for UGDH-AS1 Gene

No Data Available

Interacting Proteins for UGDH-AS1 Gene

Gene Ontology (GO) - Biological Process for UGDH-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UGDH-AS1 Gene

Drugs & Compounds for UGDH-AS1 Gene

No Compound Related Data Available

Transcripts for UGDH-AS1 Gene

mRNA/cDNA for UGDH-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UGDH-AS1 Gene

UGDH antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UGDH-AS1 Gene

No ASD Table

Relevant External Links for UGDH-AS1 Gene

GeneLoc Exon Structure for
UGDH-AS1
ECgene alternative splicing isoforms for
UGDH-AS1

Expression for UGDH-AS1 Gene

mRNA expression in normal human tissues for UGDH-AS1 Gene

SOURCE GeneReport for Unigene cluster for UGDH-AS1 Gene Hs.640769

genes like me logo Genes that share expression patterns with UGDH-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for UGDH-AS1 Gene

Orthologs for UGDH-AS1 Gene

Evolution for UGDH-AS1 Gene

ENSEMBL:
Gene Tree for UGDH-AS1 (if available)
TreeFam:
Gene Tree for UGDH-AS1 (if available)

No data available for Orthologs for UGDH-AS1 Gene

Paralogs for UGDH-AS1 Gene

No data available for Paralogs for UGDH-AS1 Gene

Variants for UGDH-AS1 Gene

Sequence variations from dbSNP and Humsavar for UGDH-AS1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs3435 -- 39,535,699(+) TTGGG(G/T)AAGTC intron-variant
rs1138891 -- 39,532,402(+) taagc(G/T)ctctc intron-variant
rs2125312 -- 39,539,792(-) tattt(C/T)tgttt intron-variant
rs3775077 -- 39,529,837(+) GAAGT(A/G)TACAA intron-variant
rs4975022 -- 39,537,399(+) GGCAA(C/T)AGGGC intron-variant

Relevant External Links for UGDH-AS1 Gene

HapMap Linkage Disequilibrium report
UGDH-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UGDH-AS1 Gene

Disorders for UGDH-AS1 Gene

Relevant External Links for UGDH-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UGDH-AS1

No disorders were found for UGDH-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UGDH-AS1 Gene

Publications for UGDH-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for UGDH-AS1 Gene

Sources for UGDH-AS1 Gene

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