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Aliases for UCKL1-AS1 Gene

Subcategory (RNA class) for UCKL1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for UCKL1-AS1 Gene

  • UCKL1 Antisense RNA 1 2 3
  • Uridine-Cytidine Kinase 1-Like 1 Opposite Strand 2 3
  • UCKL1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • UCKL1 Antisense RNA (Non-Protein Coding) 2 3
  • Uridine/Cytidine Kinase-Like 1 Opposite Strand Transcript Protein 3
  • Uncharacterized Protein UCKL1AS 3
  • UCKL1-AS 3
  • UCKL1AS 3
  • UCKL1OS 3

External Ids for UCKL1-AS1 Gene

ORGUL Members for UCKL1-AS1 Gene

Previous Symbols for UCKL1-AS1 Gene

  • UCKL1OS
  • UCKL1AS
  • UCKL1-AS

Summaries for UCKL1-AS1 Gene

GeneCards Summary for UCKL1-AS1 Gene

UCKL1-AS1 (UCKL1 Antisense RNA 1) is an RNA Gene, and belongs to the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UCKL1-AS1 Gene

Genomics for UCKL1-AS1 Gene

Genomic Location for UCKL1-AS1 Gene

Start:
63,953,384 bp from pter
End:
63,956,985 bp from pter
Size:
3,602 bases
Orientation:
Plus strand

Genomic View for UCKL1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UCKL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UCKL1-AS1 Gene

No data available for Regulatory Elements for UCKL1-AS1 Gene

Proteins for UCKL1-AS1 Gene

Post-translational modifications for UCKL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UCKL1-AS1 Gene

Domains for UCKL1-AS1 Gene

Gene Families for UCKL1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with UCKL1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UCKL1-AS1 Gene

Function for UCKL1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for UCKL1-AS1 Gene

Localization for UCKL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UCKL1-AS1 Gene

Pathways for UCKL1-AS1 Gene

SuperPathways for UCKL1-AS1 Gene

No Data Available

Interacting Proteins for UCKL1-AS1 Gene

Gene Ontology (GO) - Biological Process for UCKL1-AS1 Gene

None

No data available for Pathways by source for UCKL1-AS1 Gene

Transcripts for UCKL1-AS1 Gene

mRNA/cDNA for UCKL1-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UCKL1-AS1 Gene

UCKL1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UCKL1-AS1 Gene

No ASD Table

Relevant External Links for UCKL1-AS1 Gene

GeneLoc Exon Structure for
UCKL1-AS1
ECgene alternative splicing isoforms for
UCKL1-AS1

Expression for UCKL1-AS1 Gene

mRNA expression in normal human tissues for UCKL1-AS1 Gene

mRNA expression in normal human tissues for UCKL1-AS1 Gene

SOURCE GeneReport for Unigene cluster for UCKL1-AS1 Gene Hs.551552

genes like me logo Genes that share expressions with UCKL1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for UCKL1-AS1 Gene

Orthologs for UCKL1-AS1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for UCKL1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm16119 16
Species with no ortholog for UCKL1-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for UCKL1-AS1 Gene

ENSEMBL:
Gene Tree for UCKL1-AS1 (if available)
TreeFam:
Gene Tree for UCKL1-AS1 (if available)

Paralogs for UCKL1-AS1 Gene

No data available for Paralogs for UCKL1-AS1 Gene

Variants for UCKL1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for UCKL1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv913190 CNV Loss 21882294
nsv428381 CNV Gain+Loss 18775914
nsv913250 CNV Loss 21882294
nsv509784 CNV Insertion 20534489
nsv913269 CNV Loss 21882294
nsv469773 CNV Gain 16826518
nsv913270 CNV Loss 21882294
dgv4652n71 CNV Loss 21882294
dgv4653n71 CNV Loss 21882294
dgv4654n71 CNV Loss 21882294
dgv4655n71 CNV Loss 21882294
dgv4656n71 CNV Loss 21882294
nsv913285 CNV Gain 21882294
nsv913287 CNV Loss 21882294

Relevant External Links for UCKL1-AS1 Gene

HapMap Linkage Disequilibrium report
UCKL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for UCKL1-AS1 Gene

Disorders for UCKL1-AS1 Gene

No disorders were found for UCKL1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for UCKL1-AS1 Gene

Publications for UCKL1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. (PMID: 17525332) Matsuoka S. … Elledge S.J. (Science 2007) 3
  3. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles R.A. … Easton D.F. (Nat. Genet. 2013) 3

Products for UCKL1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate UCKL1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for UCKL1-AS1
    • Block miRNA regulation of UCKL1-AS1 using miScript Target Protectors

    Sources for UCKL1-AS1 Gene

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