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Aliases for UCKL1-AS1 Gene

Subcategory (RNA class) for UCKL1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for UCKL1-AS1 Gene

  • UCKL1 Antisense RNA 1 2 3
  • Uridine-Cytidine Kinase 1-Like 1 Opposite Strand 2 3
  • UCKL1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • UCKL1 Antisense RNA (Non-Protein Coding) 2 3
  • Uridine/Cytidine Kinase-Like 1 Opposite Strand Transcript Protein 3
  • Uncharacterized Protein UCKL1AS 3
  • UCKL1-AS 3
  • UCKL1AS 3
  • UCKL1OS 3

External Ids for UCKL1-AS1 Gene

ORGUL Members for UCKL1-AS1 Gene

Previous HGNC Symbols for UCKL1-AS1 Gene

  • UCKL1OS
  • UCKL1AS
  • UCKL1-AS

Previous GeneCards Identifiers for UCKL1-AS1 Gene

  • GC20P062586
  • GC20P062594
  • GC20P062628
  • GC20P062676
  • GC20P062699
  • GC20P062774

Summaries for UCKL1-AS1 Gene

GeneCards Summary for UCKL1-AS1 Gene

UCKL1-AS1 (UCKL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UCKL1-AS1 Gene

Genomics for UCKL1-AS1 Gene

Genomic Location for UCKL1-AS1 Gene

Start:
63,953,384 bp from pter
End:
63,956,985 bp from pter
Size:
3,602 bases
Orientation:
Plus strand

Genomic View for UCKL1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UCKL1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UCKL1-AS1 Gene

No data available for Regulatory Elements for UCKL1-AS1 Gene

Proteins for UCKL1-AS1 Gene

Post-translational modifications for UCKL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UCKL1-AS1 Gene

Domains for UCKL1-AS1 Gene

Gene Families for UCKL1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with UCKL1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UCKL1-AS1 Gene

Function for UCKL1-AS1 Gene

Animal Model Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate UCKL1-AS1
    • Block miRNA regulation of UCKL1-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for UCKL1-AS1

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for UCKL1-AS1 Gene

    Localization for UCKL1-AS1 Gene

    No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UCKL1-AS1 Gene

    Pathways for UCKL1-AS1 Gene

    SuperPathways for UCKL1-AS1 Gene

    No Data Available

    Interacting Proteins for UCKL1-AS1 Gene

    Gene Ontology (GO) - Biological Process for UCKL1-AS1 Gene

    None

    No data available for Pathways by source for UCKL1-AS1 Gene

    Transcripts for UCKL1-AS1 Gene

    mRNA/cDNA for UCKL1-AS1 Gene

    (1) Additional mRNA sequences :
    (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

    Unigene Clusters for UCKL1-AS1 Gene

    UCKL1 antisense RNA 1:
    Representative Sequences:

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate UCKL1-AS1
      • Block miRNA regulation of UCKL1-AS1 using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for UCKL1-AS1

      Primer Products

      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for UCKL1-AS1 Gene

      No ASD Table

      Relevant External Links for UCKL1-AS1 Gene

      GeneLoc Exon Structure for
      UCKL1-AS1
      ECgene alternative splicing isoforms for
      UCKL1-AS1

      Expression for UCKL1-AS1 Gene

      mRNA expression in normal human tissues for UCKL1-AS1 Gene

      mRNA expression in normal human tissues for UCKL1-AS1 Gene

      SOURCE GeneReport for Unigene cluster for UCKL1-AS1 Gene Hs.551552

      genes like me logo Genes that share expressions with UCKL1-AS1: view

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for UCKL1-AS1 Gene

      Orthologs for UCKL1-AS1 Gene

      This gene was present in the common ancestor of human and mouse.

      Orthologs for UCKL1-AS1 Gene

      Organism Taxonomy Gene Similarity Type Details
      mouse
      (Mus musculus)
      Mammalia Gm16119 16
      Species with no ortholog for UCKL1-AS1:
      • A. gosspyii yeast (Ashbya gossypii)
      • Actinobacteria (Mycobacterium tuberculosis)
      • African clawed frog (Xenopus laevis)
      • African malaria mosquito (Anopheles gambiae)
      • Alicante grape (Vitis vinifera)
      • alpha proteobacteria (Wolbachia pipientis)
      • amoeba (Dictyostelium discoideum)
      • Archea (Pyrococcus horikoshii)
      • baker's yeast (Saccharomyces cerevisiae)
      • barley (Hordeum vulgare)
      • beta proteobacteria (Neisseria meningitidis)
      • bread mold (Neurospora crassa)
      • chicken (Gallus gallus)
      • chimpanzee (Pan troglodytes)
      • Chromalveolata (Phytophthora infestans)
      • common water flea (Daphnia pulex)
      • corn (Zea mays)
      • cow (Bos Taurus)
      • dog (Canis familiaris)
      • E. coli (Escherichia coli)
      • filamentous fungi (Aspergillus nidulans)
      • Firmicute bacteria (Streptococcus pneumoniae)
      • fission yeast (Schizosaccharomyces pombe)
      • fruit fly (Drosophila melanogaster)
      • green algae (Chlamydomonas reinhardtii)
      • honey bee (Apis mellifera)
      • K. lactis yeast (Kluyveromyces lactis)
      • lizard (Anolis carolinensis)
      • loblloly pine (Pinus taeda)
      • malaria parasite (Plasmodium falciparum)
      • medicago trunc (Medicago Truncatula)
      • moss (Physcomitrella patens)
      • oppossum (Monodelphis domestica)
      • orangutan (Pongo pygmaeus)
      • pig (Sus scrofa)
      • platypus (Ornithorhynchus anatinus)
      • rainbow trout (Oncorhynchus mykiss)
      • rat (Rattus norvegicus)
      • rice (Oryza sativa)
      • rice blast fungus (Magnaporthe grisea)
      • schistosome parasite (Schistosoma mansoni)
      • sea anemone (Nematostella vectensis)
      • sea squirt (Ciona intestinalis)
      • sea squirt (Ciona savignyi)
      • sea urchin (Strongylocentrotus purpuratus)
      • sorghum (Sorghum bicolor)
      • soybean (Glycine max)
      • stem rust fungus (Puccinia graminis)
      • sugarcane (Saccharum officinarum)
      • thale cress (Arabidopsis thaliana)
      • tomato (Lycopersicon esculentum)
      • toxoplasmosis (Toxoplasma gondii)
      • Trichoplax (Trichoplax adhaerens)
      • tropical clawed frog (Silurana tropicalis)
      • wheat (Triticum aestivum)
      • worm (Caenorhabditis elegans)
      • zebrafish (Danio rerio)

      Evolution for UCKL1-AS1 Gene

      ENSEMBL:
      Gene Tree for UCKL1-AS1 (if available)
      TreeFam:
      Gene Tree for UCKL1-AS1 (if available)

      Paralogs for UCKL1-AS1 Gene

      No data available for Paralogs for UCKL1-AS1 Gene

      Variants for UCKL1-AS1 Gene

      Structural Variations from Database of Genomic Variants (DGV) for UCKL1-AS1 Gene

      Variant ID Type Subtype PubMed ID
      nsv913190 CNV Loss 21882294
      nsv428381 CNV Gain+Loss 18775914
      nsv913250 CNV Loss 21882294
      nsv509784 CNV Insertion 20534489
      nsv913269 CNV Loss 21882294
      nsv469773 CNV Gain 16826518
      nsv913270 CNV Loss 21882294
      dgv4652n71 CNV Loss 21882294
      dgv4653n71 CNV Loss 21882294
      dgv4654n71 CNV Loss 21882294
      dgv4655n71 CNV Loss 21882294
      dgv4656n71 CNV Loss 21882294
      nsv913285 CNV Gain 21882294
      nsv913287 CNV Loss 21882294

      Relevant External Links for UCKL1-AS1 Gene

      HapMap Linkage Disequilibrium report
      UCKL1-AS1

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for UCKL1-AS1 Gene

      Disorders for UCKL1-AS1 Gene

      No disorders were found for UCKL1-AS1 Gene.

      No data available for UniProtKB/Swiss-Prot for UCKL1-AS1 Gene

      Publications for UCKL1-AS1 Gene

      1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
      2. ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. (PMID: 17525332) Matsuoka S. … Elledge S.J. (Science 2007) 3
      3. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles R.A. … Easton D.F. (Nat. Genet. 2013) 3

      Products for UCKL1-AS1 Gene

      • QIAGEN qRT-PCR Assays for microRNAs that regulate UCKL1-AS1
        • QuantiTect SYBR Green Assays in human,mouse,rat
        • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
        • QuantiFast Probe-based Assays in human,mouse,rat
        • Predesigned siRNA for gene silencing in human,mouse,rat for UCKL1-AS1
        • Block miRNA regulation of UCKL1-AS1 using miScript Target Protectors

        Sources for UCKL1-AS1 Gene

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