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Aliases for UCKL1-AS1 Gene

Subcategory (RNA class) for UCKL1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UCKL1-AS1 Gene

  • UCKL1 Antisense RNA 1 2 3
  • Uridine-Cytidine Kinase 1-Like 1 Opposite Strand 2 3
  • UCKL1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • UCKL1 Antisense RNA (Non-Protein Coding) 2 3
  • Uridine/Cytidine Kinase-Like 1 Opposite Strand Transcript Protein 3
  • Uncharacterized Protein UCKL1AS 3
  • UCKL1-AS 3
  • UCKL1AS 3
  • UCKL1OS 3

External Ids for UCKL1-AS1 Gene

Previous HGNC Symbols for UCKL1-AS1 Gene

  • UCKL1OS
  • UCKL1AS
  • UCKL1-AS

Previous GeneCards Identifiers for UCKL1-AS1 Gene

  • GC20P062586
  • GC20P062594
  • GC20P062628
  • GC20P062676
  • GC20P062699
  • GC20P062774

Summaries for UCKL1-AS1 Gene

GeneCards Summary for UCKL1-AS1 Gene

UCKL1-AS1 (UCKL1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UCKL1-AS1 Gene

Genomics for UCKL1-AS1 Gene

Genomic Location for UCKL1-AS1 Gene

Chromosome:
20
Start:
63,953,384 bp from pter
End:
63,956,985 bp from pter
Size:
3,602 bases
Orientation:
Plus strand

Genomic View for UCKL1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for UCKL1-AS1 Gene

No data available for Regulatory Elements for UCKL1-AS1 Gene

Proteins for UCKL1-AS1 Gene

Post-translational modifications for UCKL1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UCKL1-AS1 Gene

Domains & Families for UCKL1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UCKL1-AS1 Gene

Function for UCKL1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UCKL1-AS1 Gene

Localization for UCKL1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UCKL1-AS1 Gene

Pathways & Interactions for UCKL1-AS1 Gene

SuperPathways for UCKL1-AS1 Gene

No Data Available

Interacting Proteins for UCKL1-AS1 Gene

Gene Ontology (GO) - Biological Process for UCKL1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UCKL1-AS1 Gene

Drugs & Compounds for UCKL1-AS1 Gene

No Compound Related Data Available

Transcripts for UCKL1-AS1 Gene

mRNA/cDNA for UCKL1-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UCKL1-AS1 Gene

UCKL1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UCKL1-AS1 Gene

No ASD Table

Relevant External Links for UCKL1-AS1 Gene

GeneLoc Exon Structure for
UCKL1-AS1
ECgene alternative splicing isoforms for
UCKL1-AS1

Expression for UCKL1-AS1 Gene

mRNA expression in normal human tissues for UCKL1-AS1 Gene

mRNA expression in normal human tissues for UCKL1-AS1 Gene

SOURCE GeneReport for Unigene cluster for UCKL1-AS1 Gene Hs.551552

genes like me logo Genes that share expression patterns with UCKL1-AS1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for UCKL1-AS1 Gene

Orthologs for UCKL1-AS1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for UCKL1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm16119 16
Species with no ortholog for UCKL1-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for UCKL1-AS1 Gene

ENSEMBL:
Gene Tree for UCKL1-AS1 (if available)
TreeFam:
Gene Tree for UCKL1-AS1 (if available)

Paralogs for UCKL1-AS1 Gene

No data available for Paralogs for UCKL1-AS1 Gene

Variants for UCKL1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for UCKL1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv913190 CNV Loss 21882294
nsv428381 CNV Gain+Loss 18775914
nsv913250 CNV Loss 21882294
nsv509784 CNV Insertion 20534489
nsv913269 CNV Loss 21882294
nsv469773 CNV Gain 16826518
nsv913270 CNV Loss 21882294
dgv4652n71 CNV Loss 21882294
dgv4653n71 CNV Loss 21882294
dgv4654n71 CNV Loss 21882294
dgv4655n71 CNV Loss 21882294
dgv4656n71 CNV Loss 21882294
nsv913285 CNV Gain 21882294
nsv913287 CNV Loss 21882294

Relevant External Links for UCKL1-AS1 Gene

HapMap Linkage Disequilibrium report
UCKL1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for UCKL1-AS1 Gene

Disorders for UCKL1-AS1 Gene

Relevant External Links for UCKL1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UCKL1-AS1
genes like me logo Genes that share disorders with UCKL1-AS1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UCKL1-AS1 Gene

Publications for UCKL1-AS1 Gene

  1. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles R.A. … Easton D.F. (Nat. Genet. 2013) 67
  2. ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. (PMID: 17525332) Matsuoka S. … Elledge S.J. (Science 2007) 67
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for UCKL1-AS1 Gene

Sources for UCKL1-AS1 Gene

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