Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

UCHL5 Gene

protein-coding   GIFtS: 59
GCID: GC01M192984

ubiquitin carboxyl-terminal hydrolase L5

 Explore 7 diseases affiliated with
UCHL5 via our new
 Human Malady Compendium 
Biological research products
for UCHL5
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Ubiquitin Carboxyl-Terminal Hydrolase L51 2     UCH-L52 3
UCH371 2 3 5     EC 3.4.19.123 8
CGI-701 2     INO80 Complex Subunit R2
INO80R1 2     Ubiquitin Carboxyl-Terminal Esterase L52
Ubiquitin C-Terminal Hydrolase UCH372 3     Ubiquitin Carboxyl-Terminal Hydrolase Isozyme L52
Ubiquitin Thioesterase L52 3     

External Ids:    HGNC: 196781   Entrez Gene: 513772   Ensembl: ENSG000001167507   OMIM: 6106675   UniProtKB: Q9Y5K53   
ORGUL members:         
NONCODE:n410462    

Export aliases for UCHL5 gene to outside databases

Previous GC identifers: GC01M188499 GC01M189450 GC01M190273 GC01M189716 GC01M191251 GC01M164220


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: UCHL5_HUMAN, Q9Y5K5
Function: Protease that specifically cleaves 'Lys-48'-linked polyubiquitin chains. Deubiquitinating enzyme associated
with the 19S regulatory subunit of the 26S proteasome. Putative regulatory component of the INO80 complex; however is
inactive in the INO80 complex and is activated by a transient interaction of the INO80 complex with the proteasome via
ADRM1

Gene Wiki entry for UCHL5 (Ubiquitin carboxyl-terminal hydrolase L5)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_004487.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the UCHL5 gene promoter:
         Max1   Pax-6   IRF-1   AP-2gamma   FOXJ2 (long isoform)   AP-2beta   FOXJ2   AP-2alpha   c-Myc   AP-2alphaA   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidUCHL5 promoter sequence
   Search SABiosciences Chromatin IP Primers for UCHL5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UCHL5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q32   Ensembl cytogenetic band:  1q31.2   HGNC cytogenetic band: 1q32

UCHL5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
UCHL5 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M192984:  view genomic region     (about GC identifiers)

Start:
192,984,889 bp from pter      End:
193,029,237 bp from pter
Size:
44,349 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UCHL5_HUMAN, Q9Y5K5 (See protein sequence)
Recommended Name: Ubiquitin carboxyl-terminal hydrolase isozyme L5  
Size: 329 amino acids; 37607 Da
Subunit: Component of the 19S (PA700) regulatory complex of the 26S proteasome. Interacts with ADRM1 and NFRKB; in
vitro ADRM1 and NFRKB compete for interaction with UCHL5. Component of the INO80 complex; specifically part of a
complex module associated with N-terminus of INO80
Subcellular location: Cytoplasm. Nucleus. Note=Associates with the proteasome 19S subunit in the cytoplasm. Associates
with the INO80 complex in the nucleus
5 PDB 3D structures from and Proteopedia for UCHL5:
3A7S (3D)        3IHR (3D)        3RII (3D)        3RIS (3D)        3TB3 (3D)    
Secondary accessions: Q5LJA6 Q5LJA7 Q8TBS4 Q96BJ9 Q9H1W5 Q9P0I3 Q9UQN2
Alternative splicing: 4 isoforms:  Q9Y5K5-1   Q9Y5K5-2   Q9Y5K5-3   Q9Y5K5-4   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for UCHL5: NX_Q9Y5K5

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y5K5

  • 4/6 DME Specific Peptides for UCHL5 (Q9Y5K5) (see all 6)
     ENIRRKHN  QKYSEGEI  ESDPGVFTE  LSAIQSEVA 

    UCHL5 Protein expression data from MOPED and PaxDb:    About this image 
    UCHL5 Protein Expression
    REFSEQ proteins (4 alternative transcripts): 
    NP_001186190.1  NP_001186191.1  NP_001186192.1  NP_057068.1  

    ENSEMBL proteins: 
     ENSP00000408720   ENSP00000356425   ENSP00000356424   ENSP00000402847   ENSP00000356420  
     ENSP00000356421   ENSP00000356418   ENSP00000356419   ENSP00000391153   ENSP00000392416  
     ENSP00000389563   ENSP00000412265   ENSP00000356422   ENSP00000431171  
    Reactome Protein details: Q9Y5K5
    Human Recombinant Protein Products for UCHL5: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for UCHL5 
    GenScript Custom Purified and Recombinant Proteins Services for UCHL5
    Novus Biologicals UCHL5 Proteins
    Novus Biologicals UCHL5 Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for UCHL5
    Uscn Proteins for UCHL5

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000502proteasome complex IEA--
    GO:0005622intracellular ----
    GO:0005634nucleus IDA--
    GO:0005737cytoplasm IDA--
    GO:0005829cytosol IDA18922472

    UCHL5 for ontologies           About GeneDecksing



    UCHL5 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies: UCHL5
    OriGene Custom Antibody Services for UCHL5 
    GenScript Custom Superior Antibodies Services for UCHL5
    Novus Biologicals UCHL5 Antibodies
    Abcam antibodies for UCHL5 
    Uscn Antibodies for UCHL5
    ThermoFisher Antibody for UCHL5

    Assay Products for UCHL5: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for UCHL5
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for UCHL5


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    UCHL5 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR001578 Peptidase_C12
     IPR017390 Ubiquitinyl_hydrolase_UCH37

    Graphical View of Domain Structure for InterPro Entry Q9Y5K5

    ProtoNet protein and cluster: Q9Y5K5

    1 Blocks protein family: IPB001578 Ubiquitin carboxyl-terminal hydrolase

    UniProtKB/Swiss-Prot: UCHL5_HUMAN, Q9Y5K5
    Similarity: Belongs to the peptidase C12 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: UCHL5_HUMAN, Q9Y5K5
    Function: Protease that specifically cleaves 'Lys-48'-linked polyubiquitin chains. Deubiquitinating enzyme associated
    with the 19S regulatory subunit of the 26S proteasome. Putative regulatory component of the INO80 complex; however is
    inactive in the INO80 complex and is activated by a transient interaction of the INO80 complex with the proteasome via
    ADRM1
    Catalytic activity: Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the
    C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal)
    Enzyme regulation: Activated by ADRM1. Inhibited by interaction with NFRKB

         Enzyme Number (IUBMB): EC 3.4.19.121 2

         Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004221ubiquitin thiolesterase activity IEA--
    GO:0004843ubiquitin-specific protease activity IDA18922472
    GO:0004866endopeptidase inhibitor activity IMP18162577
    GO:0005515protein binding IPI--
    GO:0008242omega peptidase activity IEA--
         
    UCHL5 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for UCHL5:
     Decreased Salmonella enterica   Synthetic lethal with Ras 

         5 MGI mutant phenotypes (inferred from 1 allele(MGI details for Uchl5):
     cellular  embryogenesis  growth/size  mortality/aging  nervous system 

    UCHL5 for phenotypes           About GeneDecksing

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for UCHL5 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: UCHL5
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat UCHL5
    8/48 QIAGEN miScript miRNA Assays for microRNAs that regulate UCHL5 (see all 48):
    hsa-miR-21* hsa-miR-607 hsa-let-7d hsa-miR-4328 hsa-miR-192 hsa-miR-570 hsa-miR-502-3p hsa-let-7g
    SwitchGear 3'UTR luciferase reporter plasmidUCHL5 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for UCHL5 (see all 7)
    OriGene shRNA RFP: UCHL5
    OriGene siRNA: UCHL5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UCHL5
    Sirion Biotech Custom design and validation of potent shRNA sequences against UCHL5 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for UCHL5
    Sirion Biotech Customized adenovirus for overexpression of UCHL5 
    Sirion Biotech Customized adenovirus for potent knockdown of UCHL5

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UCHL5 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UCHL5
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 4): UCHL5 (NM_001199263)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for UCHL5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UCHL5 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for UCHL5
    Search LifeMap BioReagents cell lines for UCHL5
    Sirion Biotech Customized stable knockdown cell line services for UCHL5 
    Sirion Biotech Customized inducible knockdown cell line services for UCHL5
    Sirion Biotech Customized stable overexpressing cell line services for UCHL5
    Sirion Biotech Customized inducible overexpressing cell line services for UCHL5

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UCHL5


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1TGF-beta receptor signaling activates SMADs
    TGF-beta receptor signaling activates SMADs1.00
    Downregulation of TGF-beta receptor signaling0.90
    2Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
    Signaling by TGF-beta Receptor Complex0.61
    3Signaling by GPCR
    Signal Transduction0.56

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    4        Reactome Pathways for UCHL5
        Signaling by TGF-beta Receptor Complex
    TGF-beta receptor signaling activates SMADs
    Signal Transduction
    Downregulation of TGF-beta receptor signaling



    UCHL5 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for UCHL5

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/910 Interacting proteins for UCHL5 (Q9Y5K51, 2, 3 ENSP000003564254) via UniProtKB, MINT, STRING, and/or I2D (see all 910)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ADRM1Q161861, 2, 3, ENSP000002530034EBI-1051183,EBI-954387 MINT-3373742 MINT-4050637 MINT-4050597 MINT-4050618 MINT-3373565 MINT-4050661 MINT-4050722 MINT-3373718 MINT-3373835 MINT-3373811 I2D: score=5 STRING: ENSP00000253003
    HIST1H4AP628053, ENSP000003529804I2D: score=14 STRING: ENSP00000352980
    HIST1H4CP628053, ENSP000003670344I2D: score=14 STRING: ENSP00000367034
    HIST1H4DP628053, ENSP000003432824I2D: score=14 STRING: ENSP00000343282
    HIST1H4EP628053, ENSP000003536244I2D: score=14 STRING: ENSP00000353624
    About this table

    Gene Ontology (GO): 5/13 biological process terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006281DNA repair IEA--
    GO:0006310DNA recombination IEA--
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--
    GO:0006511ubiquitin-dependent protein catabolic process IEA--

    UCHL5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for UCHL5
    Search CenterWatch for drugs/clinical trials and news about UCHL5 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for UCHL5 gene (4 alternative transcripts): 
    NM_001199261.1  NM_001199262.1  NM_001199263.1  NM_015984.3  

    Unigene Cluster for UCHL5:

    Ubiquitin carboxyl-terminal hydrolase L5
    Hs.145469  [show with all ESTs]
    Unigene Representative Sequence: NM_015984
    15 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000420791 ENST00000367455(uc001gsm.3 uc001gsn.3) ENST00000367454(uc001gso.3 uc010pov.2)
    ENST00000449480 ENST00000367450 ENST00000367451 ENST00000367448(uc001gsp.3)
    ENST00000367449(uc001gsq.3) ENST00000443327 ENST00000416915 ENST00000421683
    ENST00000483156 ENST00000417752 ENST00000367452(uc010pow.1) ENST00000530098(uc010pox.2)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone: UCHL5
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat UCHL5
    8/48 QIAGEN miScript miRNA Assays for microRNAs that regulate UCHL5 (see all 48):
    hsa-miR-21* hsa-miR-607 hsa-let-7d hsa-miR-4328 hsa-miR-192 hsa-miR-570 hsa-miR-502-3p hsa-let-7g
    SwitchGear 3'UTR luciferase reporter plasmidUCHL5 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for UCHL5 (see all 7)
    OriGene shRNA RFP: UCHL5
    OriGene siRNA: UCHL5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UCHL5
    Sirion Biotech Custom design and validation of potent shRNA sequences against UCHL5 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UCHL5 (see all 4)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UCHL5
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 4): UCHL5 (NM_001199263)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for UCHL5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UCHL5 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UCHL5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat UCHL5
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UCHL5
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UCHL5

    Additional cDNA sequence: 

    AF147717.1 AF151828.1 AF157320.1 AK024751.1 AK123655.1 AK225794.1 AK296487.1 AK301381.1 
    AK314445.1 AK316064.1 BC015381.1 BC015521.1 BC025369.2 BT006790.1 NR_037607.1 

    19 DOTS entries:

    DT.413192  DT.100852894  DT.451993  DT.100802792  DT.95271248  DT.100657698  DT.92031871  DT.92066219 
    DT.121333259  DT.121333263  DT.121333266  DT.121333335  DT.442349  DT.75106208  DT.95271250  DT.95356535 
    DT.121333232  DT.75158724  DT.95247667 

    24/196 AceView cDNA sequences (see all 196):

    AA553729 BC025369 BU194202 CK903489 BM677570 AA453326 BM771289 CB155982 
    BX111590 AI278259 BP354222 BM739400 AI146990 CB126041 BQ068400 AI374774 
    CB161772 BE910315 AL558259 BX484791 CK903488 AI674158 BQ923828 AA814801 

    GeneLoc Exon Structure

    5/9 Alternative Splicing Database (ASD) splice patterns (SP) for UCHL5 (see all 9)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15a · 15b · 15c · 15d
    SP1:                                            -     -                                   -                                                               
    SP2:                                            -     -                                   -                       -                                       
    SP3:                                            -     -                                   -                       -     -     -                           
    SP4:                                            -     -                                   -                       -     -     -                           
    SP5:                                                                                                              -     -     -                           


    ECgene alternative splicing isoforms for UCHL5

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    UCHL5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --
    UCHL5 Expression
    About this image

    UCHL5 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    LiverLiver LobuleLiver
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See UCHL5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for UCHL5

    SOURCE GeneReport for Unigene cluster: Hs.145469
        SABiosciences Custom PCR Arrays for UCHL5
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UCHL5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat UCHL5
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UCHL5
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UCHL5
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UCHL5

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for UCHL5 gene from 9/35 species (see all 35)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves UCHL51 ubiquitin carboxyl-terminal hydrolase L5 84.82(n)
    93.84(a)
      424359  NM_001006530.1  NP_001006530.1 
    lizard
    (Anolis carolinensis)
    Reptilia UCHL56
    --
    94(a)
    1 ↔ 1
    GL343267.1(1246907-1267890)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia BX761416.12   -- 78.89(n)    BX761416.1 
    zebrafish
    (Danio rerio)
    Actinopterygii uchl51 ubiquitin carboxyl-terminal hydrolase L5 74.67(n)
    88.75(a)
      406357  NM_213084.1  NP_998249.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Uch-L31 Ubiquitin C-terminal hydrolase 59.01(n)
    62.58(a)
      39102  NM_079279.2  NP_524003.1 
    worm
    (Caenorhabditis elegans)
    Secernentea ubh-41 Protein UBH-4 53.85(n)
    48.86(a)
      174289  NM_063283.3  NP_495684.2 
    A. gossypii yeast
    (Ashbya gossypii)
    Saccharomycetes AGOS_AGL316W1 AGL316Wp 45.82(n)
    37.09(a)
      4622644  NM_211413.1  NP_986351.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons UCH21 ubiquitin carboxyl-terminal hydrolase L5 55.74(n)
    51.95(a)
      842876  NM_105238.2  NP_564858.1 
    rice
    (Oryza sativa)
    Liliopsida AK104700.12   -- 74.2(n)    AK104700.1 


    ENSEMBL Gene Tree for UCHL5 (if available)
    TreeFam Gene Tree for UCHL5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for UCHL5 gene
    BAP12  
    1 SIMAP similar gene for UCHL5 using alignment to 11 protein entries:     UCHL5_HUMAN (see all proteins):
    BAP1

    UCHL5 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for UCHL5
    PGOHUM00000259758


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/557 NCBI SNPs in UCHL5 are shown (see all 557    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1451914891,2
    --192981137(+) GTCTTC/TTGGGT 2 -- ds50010--------
    rs2018299811,2
    C--192981182(+) CAGCTA/TTNNNN 2 -- ds50010--------
    rs1810075041,2
    --192981337(+) GGCGGC/GGGACA 2 -- ds50010--------
    rs1487239271,2
    --192981366(+) AAATAC/TACCTA 2 -- ds50010--------
    rs1863876231,2
    --192981400(+) TATGGC/TTTATT 2 -- ds50010--------
    rs561991521,2
    C--192981433(+) CAAGAA/GAGAAT 2 -- ds50012Minor allele frequency- G:0.12WA 120
    rs1911454621,2
    --192981539(+) TCATAC/TTGACA 2 -- ut310--------
    rs1835517651,2
    --192981575(+) CATCAA/GACATG 2 -- ut310--------
    rs1868105051,2
    --192981577(+) TCAAAC/GATGAT 2 -- ut310--------
    rs1144756541,2
    --192981655(+) CAGTGT/CTAGTT 2 -- ut311Minor allele frequency- C:0.01NA 120

    HapMap Linkage Disequilibrium report for UCHL5 (192984889 - 193029237 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for UCHL5
         1 CNV: 34745

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UCHL5
    DNA2.0 Custom Variant and Variant Library Synthesis for UCHL5

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    UCHL5 for disorders           About GeneDecksing

    OMIM gene information: 610667    OMIM disorders: --

    7 diseases for UCHL5:    About MalaCards
    sipple syndrome    parathyroid carcinoma    cervical carcinoma    hepatocellular carcinoma
    cervicitis    carcinoma    malaria


    Export disorders for UCHL5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for UCHL5 gene, integrated from 9 sources (see all 52):
    (articles sorted by number of sources associating them with UCHL5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. (PubMed id 10810093)1, 2, 3 Lai C.H....Lin W. (2000)
    2. Proteasome recruitment and activation of the Uch37 deubiquitinating enzyme by Adrm1. (PubMed id 16906146)1, 2, 9 Yao T.... Cohen R.E. (2006)
    3. The deubiquitinating enzyme UCH37 interacts with Smad s and regulates TGF-beta signalling. (PubMed id 16027725)1, 3, 9 Wicks S.J....Chantry A. (2005)
    4. Subunit organization of the human INO80 chromatin remodeling complex: An evolutionarily conserved core complex catalyzes ATP-dependent nucleosome remodeling. (PubMed id 21303910)1, 2 Chen L.... Conaway R.C. (2011)
    5. Crystal structure of the de-ubiquitinating enzyme UCH 37 (human UCH-L5) catalytic domain. (PubMed id 19836345)1, 2 Nishio K....Morimoto Y. (2009)
    6. Distinct modes of regulation of the Uch37 deubiquitinating enzyme in the proteasome and in the Ino80 chromatin-remodeling complex. (PubMed id 18922472)1, 2 Yao T....Conaway J.W. (2008)
    7. hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds the deubiquitinating enzyme, UCH37. (PubMed id 17139257)1, 2 Qiu X.-B.... Goldberg A.L. (2006)
    8. A novel proteasome-interacting protein recruits the deubiquitinating enzyme UCH37 to 26S proteasomes. (PubMed id 16990800)1, 2 Hamazaki J....Murata S. (2006)
    9. The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)1, 2 Gregory S.G.... Bentley D.R. (2006)
    10. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 51377 HGNC: 19678 AceView: UCHL5 Ensembl:ENSG00000116750 euGenes: HUgn51377
    ECgene: UCHL5 H-InvDB: UCHL5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for UCHL5 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for UCHL5 gene:
    Search GeneIP for patents involving UCHL5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for UCHL5   OriGene shRNA RFP for UCHL5  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for UCHL5   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UCHL5  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for UCHL5   OriGene 3'-UTR Clone for UCHL5  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UCHL5   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UCHL5  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for UCHL5   OriGene Custom Protein Services for UCHL5  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat UCHL5
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UCHL5
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UCHL5
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UCHL5
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UCHL5
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UCHL5
     GenScript Custom Purified and Recombinant Proteins Services for UCHL5 GenScript cDNA clones with any tag delivered in your preferred vector for UCHL5
     GenScript Custom Assay Services for UCHL5 GenScript Custom Superior Antibodies Services for UCHL5
     GenScript Custom overexpressing Cell Line Services for UCHL5 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in UCHL5 promoter
     Search Chromatin IP Primers for UCHL5
     RT2 qPCR Primer Assay in human, mouse, rat UCHL5
     GNC Network for UCHL5
     SABiosciences Custom PCR Arrays for UCHL5
     Search Tocris compounds for UCHL5
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     UCHL5 antibodies
     UCHL5 proteins
     UCHL5 lysates
     Antibodies for UCHL5
     See all of Abcam's Antibodies, Kits and Proteins for UCHL5
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Recombinant Protein for UCHL5




     UCHL5 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for UCHL5
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UCHL5
     SwitchGear 3'UTR luciferase reporter plasmids for UCHL5
     SwitchGear Promoter luciferase reporter plasmids for UCHL5
     ThermoFisher Antibody for UCHL5
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UCHL5
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for UCHL5
    Sirion Biotech Customized:
     stable knockdown cell line services for UCHL5
     inducible knockdown cell line services for UCHL5
     design and validation of potent shRNA sequences against UCHL5
     adenovirus for potent knockdown of UCHL5
     adenovirus for overexpression of UCHL5
     stable overexpressing cell line services for UCHL5
     inducible overexpressing cell line services for UCHL5
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      UCHL5 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4