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Aliases for UBXN7-AS1 Gene

Subcategory (RNA class) for UBXN7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBXN7-AS1 Gene

  • UBXN7 Antisense RNA 1 2 3 5
  • UBXN7 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBXN7-AS1 Gene

Previous GeneCards Identifiers for UBXN7-AS1 Gene

  • GC00U933578
  • GC03P196159

Summaries for UBXN7-AS1 Gene

GeneCards Summary for UBXN7-AS1 Gene

UBXN7-AS1 (UBXN7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBXN7-AS1 Gene

Genomics for UBXN7-AS1 Gene

Regulatory Elements for UBXN7-AS1 Gene


Enhancers around UBXN7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UBXN7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001383830 915 3000 HDGF PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF143 ZNF207 FOS

Genomic Location for UBXN7-AS1 Gene

Chromosome:
3
Start:
196,431,385 bp from pter
End:
196,432,530 bp from pter
Size:
1,146 bases
Orientation:
Plus strand

Genomic View for UBXN7-AS1 Gene

Genes around UBXN7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBXN7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBXN7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBXN7-AS1 Gene

Proteins for UBXN7-AS1 Gene

Post-translational modifications for UBXN7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBXN7-AS1 Gene

Domains & Families for UBXN7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBXN7-AS1 Gene

Function for UBXN7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBXN7-AS1 Gene

Localization for UBXN7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBXN7-AS1 Gene

Pathways & Interactions for UBXN7-AS1 Gene

SuperPathways for UBXN7-AS1 Gene

No Data Available

Interacting Proteins for UBXN7-AS1 Gene

Gene Ontology (GO) - Biological Process for UBXN7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBXN7-AS1 Gene

Transcripts for UBXN7-AS1 Gene

mRNA/cDNA for UBXN7-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBXN7-AS1 Gene

No ASD Table

Relevant External Links for UBXN7-AS1 Gene

GeneLoc Exon Structure for
UBXN7-AS1
ECgene alternative splicing isoforms for
UBXN7-AS1

Expression for UBXN7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UBXN7-AS1 Gene

genes like me logo Genes that share expression patterns with UBXN7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UBXN7-AS1 Gene

Orthologs for UBXN7-AS1 Gene

Evolution for UBXN7-AS1 Gene

ENSEMBL:
Gene Tree for UBXN7-AS1 (if available)
TreeFam:
Gene Tree for UBXN7-AS1 (if available)

No data available for Orthologs for UBXN7-AS1 Gene

Paralogs for UBXN7-AS1 Gene

No data available for Paralogs for UBXN7-AS1 Gene

Variants for UBXN7-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBXN7-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10532490 -- 196,431,598(+) CGTCT(-/CC)GTCTT intron-variant, nc-transcript-variant
rs112015335 -- 196,432,035(+) CGGGC(A/C)GGCGG intron-variant, nc-transcript-variant
rs112792658 -- 196,430,279(+) GAACC(C/T)GGGAG intron-variant, upstream-variant-2KB
rs11290106 -- 196,433,391(+) AAAAA(-/A)GATAT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113246406 -- 196,430,183(+) AACCC(C/T)GCCTC intron-variant, upstream-variant-2KB

Relevant External Links for UBXN7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBXN7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBXN7-AS1 Gene

Disorders for UBXN7-AS1 Gene

Relevant External Links for UBXN7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBXN7-AS1

No disorders were found for UBXN7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBXN7-AS1 Gene

Publications for UBXN7-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for UBXN7-AS1 Gene

Sources for UBXN7-AS1 Gene

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