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Aliases for UBTFL6 Gene

Aliases for UBTFL6 Gene

  • Upstream Binding Transcription Factor, RNA Polymerase I-Like 6 (Pseudogene) 2 3 5
  • Upstream Binding Transcription Factor, RNA Polymerase I-Like 6 2

External Ids for UBTFL6 Gene

Previous GeneCards Identifiers for UBTFL6 Gene

  • GC02M098253
  • GC02M092018

Summaries for UBTFL6 Gene

GeneCards Summary for UBTFL6 Gene

UBTFL6 (Upstream Binding Transcription Factor, RNA Polymerase I-Like 6 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBTFL6 Gene

Genomics for UBTFL6 Gene

Regulatory Elements for UBTFL6 Gene

Enhancers for UBTFL6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F097625 1 Ensembl 0.4 +11.9 11903 0.6 ZNF316 PKNOX1 MAFG NFE2 EMSY LOC100506123 ZAP70 LOC105373499 UBTFL6
GH02F097618 0.2 Ensembl 0.3 +18.6 18603 2.0 ZFHX2 GLIS1 ZIC2 EGR2 LOC100506123 ANKRD36B LOC105373499 UBTFL6
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around UBTFL6 on UCSC Golden Path with GeneCards custom track

Genomic Location for UBTFL6 Gene

Chromosome:
2
Start:
97,636,585 bp from pter
End:
97,637,803 bp from pter
Size:
1,219 bases
Orientation:
Minus strand

Genomic View for UBTFL6 Gene

Genes around UBTFL6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBTFL6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBTFL6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBTFL6 Gene

Proteins for UBTFL6 Gene

  • Protein details for UBTFL6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CB48-UBFL6_HUMAN
    Recommended name:
    Putative upstream-binding factor 1-like protein 6
    Protein Accession:
    P0CB48

    Protein attributes for UBTFL6 Gene

    Size:
    400 amino acids
    Molecular mass:
    46551 Da
    Quaternary structure:
    No Data Available

neXtProt entry for UBTFL6 Gene

Post-translational modifications for UBTFL6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for UBTFL6 Gene

Domains & Families for UBTFL6 Gene

Protein Domains for UBTFL6 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for UBTFL6 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0CB48

UniProtKB/Swiss-Prot:

UBFL6_HUMAN :
  • Contains 2 HMG box DNA-binding domains.
Domain:
  • Contains 2 HMG box DNA-binding domains.
genes like me logo Genes that share domains with UBTFL6: view

No data available for Gene Families for UBTFL6 Gene

Function for UBTFL6 Gene

Gene Ontology (GO) - Molecular Function for UBTFL6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
genes like me logo Genes that share ontologies with UBTFL6: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBTFL6 Gene

Localization for UBTFL6 Gene

Subcellular locations from UniProtKB/Swiss-Prot for UBTFL6 Gene

Gene Ontology (GO) - Cellular Components for UBTFL6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with UBTFL6: view

No data available for Subcellular locations from COMPARTMENTS for UBTFL6 Gene

Pathways & Interactions for UBTFL6 Gene

SuperPathways for UBTFL6 Gene

No Data Available

Interacting Proteins for UBTFL6 Gene

Gene Ontology (GO) - Biological Process for UBTFL6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBTFL6 Gene

Transcripts for UBTFL6 Gene

mRNA/cDNA for UBTFL6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBTFL6 Gene

No ASD Table

Relevant External Links for UBTFL6 Gene

GeneLoc Exon Structure for
UBTFL6
ECgene alternative splicing isoforms for
UBTFL6

Expression for UBTFL6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UBTFL6 Gene

mRNA differential expression in normal tissues according to GTEx for UBTFL6 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (x4.0).

Protein differential expression in normal tissues from HIPED for UBTFL6 Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for UBTFL6 Gene



Protein tissue co-expression partners for UBTFL6 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of UBTFL6 Gene:

UBTFL6
genes like me logo Genes that share expression patterns with UBTFL6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for UBTFL6 Gene

Orthologs for UBTFL6 Gene

Evolution for UBTFL6 Gene

ENSEMBL:
Gene Tree for UBTFL6 (if available)
TreeFam:
Gene Tree for UBTFL6 (if available)

No data available for Orthologs for UBTFL6 Gene

Paralogs for UBTFL6 Gene

(2) SIMAP similar genes for UBTFL6 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with UBTFL6: view

No data available for Paralogs for UBTFL6 Gene

Variants for UBTFL6 Gene

Relevant External Links for UBTFL6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBTFL6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBTFL6 Gene

Disorders for UBTFL6 Gene

No disorders were found for UBTFL6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for UBTFL6 Gene

Publications for UBTFL6 Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4 64

Products for UBTFL6 Gene

Sources for UBTFL6 Gene

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