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Aliases for UBOX5-AS1 Gene

Subcategory (RNA class) for UBOX5-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for UBOX5-AS1 Gene

  • UBOX5 Antisense RNA 1 2 3
  • UBOX5 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBOX5-AS1 Gene

ORGUL Members for UBOX5-AS1 Gene

Previous GeneCards Identifiers for UBOX5-AS1 Gene

  • GC20P003088

Summaries for UBOX5-AS1 Gene

GeneCards Summary for UBOX5-AS1 Gene

UBOX5-AS1 (UBOX5 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBOX5-AS1 Gene

Genomics for UBOX5-AS1 Gene

Genomic Location for UBOX5-AS1 Gene

Start:
3,106,911 bp from pter
End:
3,150,867 bp from pter
Size:
43,957 bases
Orientation:
Plus strand

Genomic View for UBOX5-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UBOX5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBOX5-AS1 Gene

No data available for Regulatory Elements for UBOX5-AS1 Gene

Proteins for UBOX5-AS1 Gene

Post-translational modifications for UBOX5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBOX5-AS1 Gene

Domains for UBOX5-AS1 Gene

Gene Families for UBOX5-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with UBOX5-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBOX5-AS1 Gene

Function for UBOX5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for UBOX5-AS1 Gene

Localization for UBOX5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBOX5-AS1 Gene

Pathways for UBOX5-AS1 Gene

SuperPathways for UBOX5-AS1 Gene

No Data Available

Interacting Proteins for UBOX5-AS1 Gene

Gene Ontology (GO) - Biological Process for UBOX5-AS1 Gene

None

No data available for Pathways by source for UBOX5-AS1 Gene

Transcripts for UBOX5-AS1 Gene

mRNA/cDNA for UBOX5-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UBOX5-AS1 Gene

UBOX5 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UBOX5-AS1 Gene

No ASD Table

Relevant External Links for UBOX5-AS1 Gene

GeneLoc Exon Structure for
UBOX5-AS1
ECgene alternative splicing isoforms for
UBOX5-AS1

Expression for UBOX5-AS1 Gene

mRNA expression in normal human tissues for UBOX5-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UBOX5-AS1 Gene

This gene is overexpressed in Testis (4.4).

SOURCE GeneReport for Unigene cluster for UBOX5-AS1 Gene Hs.129448

genes like me logo Genes that share expressions with UBOX5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for UBOX5-AS1 Gene

Orthologs for UBOX5-AS1 Gene

Evolution for UBOX5-AS1 Gene

ENSEMBL:
Gene Tree for UBOX5-AS1 (if available)
TreeFam:
Gene Tree for UBOX5-AS1 (if available)

No data available for Orthologs for UBOX5-AS1 Gene

Paralogs for UBOX5-AS1 Gene

No data available for Paralogs for UBOX5-AS1 Gene

Variants for UBOX5-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBOX5-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs2422844 -- 3,106,387(+) GACTT(C/T)AGGGA upstream-variant-2KB
rs4815568 -- 3,104,946(+) ccacc(A/G)catct upstream-variant-2KB
rs6037485 -- 3,105,464(+) agtag(A/G)gacag upstream-variant-2KB
rs6076476 -- 3,106,047(+) GGGGG(C/G)GCTTT upstream-variant-2KB
rs6115790 -- 3,104,912(+) TGGCC(A/T)CCCAA upstream-variant-2KB

Relevant External Links for UBOX5-AS1 Gene

HapMap Linkage Disequilibrium report
UBOX5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for UBOX5-AS1 Gene

Disorders for UBOX5-AS1 Gene

No disorders were found for UBOX5-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for UBOX5-AS1 Gene

Publications for UBOX5-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for UBOX5-AS1 Gene

Sources for UBOX5-AS1 Gene

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