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Aliases for UBOX5-AS1 Gene

Subcategory (RNA class) for UBOX5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBOX5-AS1 Gene

  • UBOX5 Antisense RNA 1 2 3 5
  • UBOX5 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBOX5-AS1 Gene

Previous GeneCards Identifiers for UBOX5-AS1 Gene

  • GC20P003088

Summaries for UBOX5-AS1 Gene

GeneCards Summary for UBOX5-AS1 Gene

UBOX5-AS1 (UBOX5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBOX5-AS1 Gene

Genomics for UBOX5-AS1 Gene

Genomic Location for UBOX5-AS1 Gene

Chromosome:
20
Start:
3,106,911 bp from pter
End:
3,150,867 bp from pter
Size:
43,957 bases
Orientation:
Plus strand

Genomic View for UBOX5-AS1 Gene

Genes around UBOX5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBOX5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBOX5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBOX5-AS1 Gene

No data available for Regulatory Elements for UBOX5-AS1 Gene

Proteins for UBOX5-AS1 Gene

Post-translational modifications for UBOX5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBOX5-AS1 Gene

Domains & Families for UBOX5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBOX5-AS1 Gene

Function for UBOX5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBOX5-AS1 Gene

Localization for UBOX5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBOX5-AS1 Gene

Pathways & Interactions for UBOX5-AS1 Gene

SuperPathways for UBOX5-AS1 Gene

No Data Available

Interacting Proteins for UBOX5-AS1 Gene

Gene Ontology (GO) - Biological Process for UBOX5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBOX5-AS1 Gene

Drugs & Compounds for UBOX5-AS1 Gene

No Compound Related Data Available

Transcripts for UBOX5-AS1 Gene

mRNA/cDNA for UBOX5-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UBOX5-AS1 Gene

UBOX5 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UBOX5-AS1 Gene

No ASD Table

Relevant External Links for UBOX5-AS1 Gene

GeneLoc Exon Structure for
UBOX5-AS1
ECgene alternative splicing isoforms for
UBOX5-AS1

Expression for UBOX5-AS1 Gene

mRNA expression in normal human tissues for UBOX5-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UBOX5-AS1 Gene

This gene is overexpressed in Testis (x4.4).

SOURCE GeneReport for Unigene cluster for UBOX5-AS1 Gene Hs.129448

genes like me logo Genes that share expression patterns with UBOX5-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for UBOX5-AS1 Gene

Orthologs for UBOX5-AS1 Gene

Evolution for UBOX5-AS1 Gene

ENSEMBL:
Gene Tree for UBOX5-AS1 (if available)
TreeFam:
Gene Tree for UBOX5-AS1 (if available)

No data available for Orthologs for UBOX5-AS1 Gene

Paralogs for UBOX5-AS1 Gene

No data available for Paralogs for UBOX5-AS1 Gene

Variants for UBOX5-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBOX5-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs11477144 -- 3,106,038(+) CCCAT(-/G)GGGGG upstream-variant-2KB
rs17255260 -- 3,106,930(+) CCACC(A/G)AGCGT nc-transcript-variant
rs35108528 -- 3,107,059(+) CCCAG(-/G)TGCTC nc-transcript-variant
rs60738248 -- 3,106,348(+) CTTAT(G/T)GTTTG upstream-variant-2KB
rs112895589 -- 3,106,036(+) CCCCC(A/T)TGGGG upstream-variant-2KB

Relevant External Links for UBOX5-AS1 Gene

HapMap Linkage Disequilibrium report
UBOX5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBOX5-AS1 Gene

Disorders for UBOX5-AS1 Gene

Relevant External Links for UBOX5-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBOX5-AS1

No disorders were found for UBOX5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBOX5-AS1 Gene

Publications for UBOX5-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67

Products for UBOX5-AS1 Gene

Sources for UBOX5-AS1 Gene

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