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Aliases for UBL7-AS1 Gene

Subcategory (RNA class) for UBL7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBL7-AS1 Gene

  • UBL7 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for UBL7-AS1 Gene

Previous GeneCards Identifiers for UBL7-AS1 Gene

  • GC15P074757
  • GC15P074758

Summaries for UBL7-AS1 Gene

GeneCards Summary for UBL7-AS1 Gene

UBL7-AS1 (UBL7 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBL7-AS1 Gene

Genomics for UBL7-AS1 Gene

Regulatory Elements for UBL7-AS1 Gene

Enhancers for UBL7-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F074768 0.8 Ensembl ENCODE 16.8 +307.7 307664 0.7 ATF1 PKNOX1 ZFP64 GLIS2 ZNF143 REST TBX21 ZNF518A ZNF623 ZNF264 ENSG00000260274 EDC3 ENSG00000203392 DNM1P35 UBL7-AS1 LOC101929333 SNX33 ISLR LMAN1L CYP1A1
GH15F074377 1.3 Ensembl ENCODE 12.5 -82.3 -82337 2.1 ZNF121 ZFHX2 TBL1XR1 IKZF1 EED EGR2 RELA SEMA7A UBL7 UBL7-AS1 ENSG00000212279 CSK CYP11A1 LOC729739 ENSG00000261384 ENSG00000274937 LOC105370894
GH15F074373 1.2 FANTOM5 ENCODE 12.5 -87.1 -87063 2.0 PKNOX1 ARID4B SIN3A ZNF48 ZNF2 GLIS2 ELK1 ZNF143 FOS DEK CSK SEMA7A UBL7 UBL7-AS1 ARID3B ENSG00000212279 CYP11A1 SCAMP2 LOC729739 ISLR
GH15F074375 0.4 ENCODE 12.5 -85.9 -85851 0.2 CTCF CBX3 SAP130 KLF17 ARID4B MAX RAD21 RFX5 RELA ZNF664 SEMA7A UBL7 UBL7-AS1 ENSG00000212279 CSK ENSG00000274937 LOC105370894
GH15F075119 0.2 ENCODE 11.8 +658.8 658790 0.2 SOX13 SAP130 SREBF2 ZNF384 CEBPG GTF3C2 CTBP1 POLR3A RCOR1 SOX5 ENSG00000260274 LOC101929333 UBL7-AS1 ULK3 FBXO22 EDC3 ENSG00000203411 LOC100128721
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around UBL7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UBL7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000238236 335 2801 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1

Genomic Location for UBL7-AS1 Gene

Chromosome:
15
Start:
74,461,265 bp from pter
End:
74,481,302 bp from pter
Size:
20,038 bases
Orientation:
Plus strand

Genomic View for UBL7-AS1 Gene

Genes around UBL7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBL7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBL7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBL7-AS1 Gene

Proteins for UBL7-AS1 Gene

Post-translational modifications for UBL7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBL7-AS1 Gene

Domains & Families for UBL7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBL7-AS1 Gene

Function for UBL7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBL7-AS1 Gene

Localization for UBL7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBL7-AS1 Gene

Pathways & Interactions for UBL7-AS1 Gene

SuperPathways for UBL7-AS1 Gene

No Data Available

Interacting Proteins for UBL7-AS1 Gene

Gene Ontology (GO) - Biological Process for UBL7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBL7-AS1 Gene

Transcripts for UBL7-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for UBL7-AS1 Gene

No ASD Table

Relevant External Links for UBL7-AS1 Gene

GeneLoc Exon Structure for
UBL7-AS1
ECgene alternative splicing isoforms for
UBL7-AS1

Expression for UBL7-AS1 Gene

mRNA expression in normal human tissues for UBL7-AS1 Gene

genes like me logo Genes that share expression patterns with UBL7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UBL7-AS1 Gene

Orthologs for UBL7-AS1 Gene

Evolution for UBL7-AS1 Gene

ENSEMBL:
Gene Tree for UBL7-AS1 (if available)
TreeFam:
Gene Tree for UBL7-AS1 (if available)

No data available for Orthologs for UBL7-AS1 Gene

Paralogs for UBL7-AS1 Gene

No data available for Paralogs for UBL7-AS1 Gene

Variants for UBL7-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBL7-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs10626261 -- 74,474,064(+) TATTC(-/TTAT)TTATT intron-variant
rs11072485 -- 74,474,443(+) CCAGG(C/G)TGGTC intron-variant
rs11072486 -- 74,474,447(+) GCTGG(G/T)CTCAA intron-variant
rs11072487 -- 74,474,453(+) CTCAA(A/C)CTCCT intron-variant
rs111362998 -- 74,468,200(+) GCCAG(A/G)TGGTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for UBL7-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1121512 CNV deletion 24896259
nsv1140134 CNV insertion 24896259

Relevant External Links for UBL7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBL7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for UBL7-AS1 Gene

Disorders for UBL7-AS1 Gene

Relevant External Links for UBL7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBL7-AS1

No disorders were found for UBL7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBL7-AS1 Gene

Publications for UBL7-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. cDNA microarray analysis of altered gene expression in Ara-C-treated leukemia cells. (PMID: 12951057) Takagaki K. … Yano J. (Biochem. Biophys. Res. Commun. 2003) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for UBL7-AS1 Gene

Sources for UBL7-AS1 Gene

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