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Aliases for UBL7-AS1 Gene

Subcategory (RNA class) for UBL7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBL7-AS1 Gene

  • UBL7 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for UBL7-AS1 Gene

Previous GeneCards Identifiers for UBL7-AS1 Gene

  • GC15P074757
  • GC15P074758

Summaries for UBL7-AS1 Gene

GeneCards Summary for UBL7-AS1 Gene

UBL7-AS1 (UBL7 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBL7-AS1 Gene

Genomics for UBL7-AS1 Gene

Regulatory Elements for UBL7-AS1 Gene

Enhancers for UBL7-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G074539 1.8 FANTOM5 Ensembl ENCODE 11.6 +80.7 80696 4.1 AGO1 ZFP64 FEZF1 YY1 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 EDC3 ENSG00000260274 ISLR UBL7 ARID3B UBL7-AS1 ENSG00000212279 DNM1P34 LOC101929333 SCAMP2
GH15G074373 1.6 FANTOM5 ENCODE dbSUPER 12.5 -87.1 -87063 2.0 PKNOX1 ARNT ARID4B SIN3A ZNF2 ZNF143 ZNF207 FOS DEK ZNF263 CSK SEMA7A UBL7 UBL7-AS1 ARID3B ENSG00000212279 CYP11A1 SCAMP2 LOC729739 ISLR
GH15G074316 1.3 Ensembl ENCODE 11.6 -142.7 -142721 4.3 HDGF PKNOX1 ARNT SIN3A ZNF766 ZNF143 KLF13 ZNF263 NFYC REST ISLR LOC101929333 UBL7-AS1 CCDC33 STRA6 CSK LOXL1 ISLR2 SCAMP5 ENSG00000277749
GH15G075180 1.3 Ensembl ENCODE dbSUPER 11.6 +719.4 719431 0.8 PKNOX1 ARNT ZSCAN4 FEZF1 TCF12 EGR2 ZNF362 OVOL3 ZNF843 KLF16 LOC101929333 ENSG00000260274 UBL7-AS1 RPP25 RPL36AP45 GC15M075020
GH15G074529 1.4 FANTOM5 Ensembl ENCODE 10.6 +69.9 69899 3.1 GLIS2 ZNF366 FOS EGR2 ZNF398 REST PRDM6 SMARCA4 GLIS1 IKZF1 ENSG00000212279 CLK3 UBL7 UBL7-AS1 CPLX3 CYP1A1 LOC101929333 ISLR RPP25 ARID3B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UBL7-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UBL7-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000079250 35 1801 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3

Genomic Location for UBL7-AS1 Gene

Chromosome:
15
Start:
74,461,265 bp from pter
End:
74,481,302 bp from pter
Size:
20,038 bases
Orientation:
Plus strand

Genomic View for UBL7-AS1 Gene

Genes around UBL7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBL7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBL7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBL7-AS1 Gene

Proteins for UBL7-AS1 Gene

Post-translational modifications for UBL7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBL7-AS1 Gene

Domains & Families for UBL7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBL7-AS1 Gene

Function for UBL7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBL7-AS1 Gene

Localization for UBL7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBL7-AS1 Gene

Pathways & Interactions for UBL7-AS1 Gene

SuperPathways for UBL7-AS1 Gene

No Data Available

Interacting Proteins for UBL7-AS1 Gene

Gene Ontology (GO) - Biological Process for UBL7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBL7-AS1 Gene

Drugs & Compounds for UBL7-AS1 Gene

No Compound Related Data Available

Transcripts for UBL7-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for UBL7-AS1 Gene

No ASD Table

Relevant External Links for UBL7-AS1 Gene

GeneLoc Exon Structure for
UBL7-AS1
ECgene alternative splicing isoforms for
UBL7-AS1

Expression for UBL7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBL7-AS1 Gene

genes like me logo Genes that share expression patterns with UBL7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBL7-AS1 Gene

Orthologs for UBL7-AS1 Gene

Evolution for UBL7-AS1 Gene

ENSEMBL:
Gene Tree for UBL7-AS1 (if available)
TreeFam:
Gene Tree for UBL7-AS1 (if available)

No data available for Orthologs for UBL7-AS1 Gene

Paralogs for UBL7-AS1 Gene

No data available for Paralogs for UBL7-AS1 Gene

Variants for UBL7-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBL7-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000046138 -- 74,480,776(+) GCCAG(A/C)CCAGA intron-variant, nc-transcript-variant
rs1000144325 -- 74,474,767(+) AACCA(A/G)AAGAG intron-variant
rs1000208661 -- 74,464,230(+) TTGAC(A/C)TTCAT intron-variant
rs1000216196 -- 74,475,056(+) GAGAC(A/G)GAGCT intron-variant
rs1000326679 -- 74,467,958(+) GATTC(G/T)TTAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for UBL7-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1121512 CNV deletion 24896259
nsv1140134 CNV insertion 24896259

Relevant External Links for UBL7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBL7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for UBL7-AS1 Gene

Disorders for UBL7-AS1 Gene

Relevant External Links for UBL7-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBL7-AS1

No disorders were found for UBL7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBL7-AS1 Gene

Publications for UBL7-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. cDNA microarray analysis of altered gene expression in Ara-C-treated leukemia cells. (PMID: 12951057) Takagaki K. … Yano J. (Biochem. Biophys. Res. Commun. 2003) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for UBL7-AS1 Gene

Sources for UBL7-AS1 Gene

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