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Aliases for UBL7-AS1 Gene

Subcategory (RNA class) for UBL7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBL7-AS1 Gene

  • UBL7 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for UBL7-AS1 Gene

Previous GeneCards Identifiers for UBL7-AS1 Gene

  • GC15P074757
  • GC15P074758

Summaries for UBL7-AS1 Gene

GeneCards Summary for UBL7-AS1 Gene

UBL7-AS1 (UBL7 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for UBL7-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBL7-AS1 Gene

Genomics for UBL7-AS1 Gene

GeneHancer (GH) Regulatory Elements for UBL7-AS1 Gene

Promoters and enhancers for UBL7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I074460 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 550.8 +0.4 358 3.1 CLOCK FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 UBL7 PIR40033 UBL7-AS1 SIN3A CLK3 LOC101929333 MAN2C1 PML ENSG00000260274 ARID3B
GH15I074539 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE 21.4 +80.7 80695 4.1 HDGF PKNOX1 SMAD1 ARID4B SIN3A FEZF1 ZNF2 ZBTB7B IRF4 YY1 ARID3B SIN3A MAN2C1 EDC3 ENSG00000260274 CLK3 ISLR UBL7-AS1 PML COMMD4
GH15I074613 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 21 +155.0 155049 4.9 MLX DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC ZNF610 CLK3 ENSG00000260919 LOC102723750 SIN3A EDC3 MAN2C1 ENSG00000260274 PML UBL7-AS1 FAM219B
GH15I073986 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 18.8 -471.5 -471485 6.8 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 ZNF766 ZNF213 STOML1 EDC3 UBL7-AS1 CLK3 LOC101929333 C15orf59 LOXL1-AS1
GH15I074412 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.6 -37.1 -37082 22.6 HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A ZNF2 POLR2B ZNF207 ZNF143 SEMA7A ENSG00000260274 MAN2C1 EDC3 CLK3 LOC101929333 PML COMMD4 ENSG00000212279 UBL7-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around UBL7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for UBL7-AS1 Gene

Genomic Locations for UBL7-AS1 Gene
chr15:74,461,265-74,481,302
(GRCh38/hg38)
Size:
20,038 bases
Orientation:
Plus strand
chr15:74,753,606-74,773,643
(GRCh37/hg19)

Genomic View for UBL7-AS1 Gene

Genes around UBL7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBL7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBL7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBL7-AS1 Gene

Proteins for UBL7-AS1 Gene

Post-translational modifications for UBL7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBL7-AS1 Gene

Domains & Families for UBL7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBL7-AS1 Gene

Function for UBL7-AS1 Gene

Phenotypes From GWAS Catalog for UBL7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBL7-AS1 Gene

Localization for UBL7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBL7-AS1 Gene

Pathways & Interactions for UBL7-AS1 Gene

SuperPathways for UBL7-AS1 Gene

No Data Available

Interacting Proteins for UBL7-AS1 Gene

Gene Ontology (GO) - Biological Process for UBL7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBL7-AS1 Gene

Drugs & Compounds for UBL7-AS1 Gene

No Compound Related Data Available

Transcripts for UBL7-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for UBL7-AS1 Gene

No ASD Table

Relevant External Links for UBL7-AS1 Gene

GeneLoc Exon Structure for
UBL7-AS1
ECgene alternative splicing isoforms for
UBL7-AS1

Expression for UBL7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBL7-AS1 Gene

genes like me logo Genes that share expression patterns with UBL7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBL7-AS1 Gene

Orthologs for UBL7-AS1 Gene

Evolution for UBL7-AS1 Gene

ENSEMBL:
Gene Tree for UBL7-AS1 (if available)
TreeFam:
Gene Tree for UBL7-AS1 (if available)

No data available for Orthologs for UBL7-AS1 Gene

Paralogs for UBL7-AS1 Gene

No data available for Paralogs for UBL7-AS1 Gene

Variants for UBL7-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBL7-AS1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000046138 -- 74,480,776(+) C/A intron_variant, non_coding_transcript_variant
rs1000144325 -- 74,474,767(+) G/A intron_variant
rs1000208661 -- 74,464,230(+) A/C intron_variant
rs1000216196 -- 74,475,056(+) G/A intron_variant
rs1000326679 -- 74,467,958(+) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for UBL7-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1121512 CNV deletion 24896259
nsv1140134 CNV insertion 24896259

Additional Variant Information for UBL7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBL7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for UBL7-AS1 Gene

Disorders for UBL7-AS1 Gene

Additional Disease Information for UBL7-AS1

No disorders were found for UBL7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBL7-AS1 Gene

Publications for UBL7-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. cDNA microarray analysis of altered gene expression in Ara-C-treated leukemia cells. (PMID: 12951057) Takagaki K … Yano J (Biochemical and biophysical research communications 2003) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for UBL7-AS1 Gene

Sources for UBL7-AS1 Gene

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