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Aliases for UBL7 Gene

Aliases for UBL7 Gene

  • Ubiquitin-Like 7 2 3
  • Ubiquitin-Like Protein SB132 2 3 4
  • Ubiquitin-Like 7 (Bone Marrow Stromal Cell-Derived) 2 3
  • BMSC-UbP 3 4
  • Bone Marrow Stromal Cell-Derived Ubiquitin-Like 2
  • Bone Marrow Stromal Cell Ubiquitin-Like Protein 4
  • Ubiquitin-Like Protein 7 3
  • BMSCUBP 4
  • TCBA1 3

External Ids for UBL7 Gene

Previous GeneCards Identifiers for UBL7 Gene

  • GC15M072526
  • GC15M074738
  • GC15M051534

Summaries for UBL7 Gene

GeneCards Summary for UBL7 Gene

UBL7 (Ubiquitin-Like 7) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBL7 Gene

Genomics for UBL7 Gene

Regulatory Elements for UBL7 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for UBL7 Gene

Start:
74,445,977 bp from pter
End:
74,461,188 bp from pter
Size:
15,212 bases
Orientation:
Minus strand

Genomic View for UBL7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UBL7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBL7 Gene

Proteins for UBL7 Gene

  • Protein details for UBL7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96S82-UBL7_HUMAN
    Recommended name:
    Ubiquitin-like protein 7
    Protein Accession:
    Q96S82
    Secondary Accessions:
    • D3DW57
    • Q96I03

    Protein attributes for UBL7 Gene

    Size:
    380 amino acids
    Molecular mass:
    40510 Da
    Quaternary structure:
    • Binds ubiquitin.

    Three dimensional structures from OCA and Proteopedia for UBL7 Gene

neXtProt entry for UBL7 Gene

Proteomics data for UBL7 Gene at MOPED

Post-translational modifications for UBL7 Gene

  • Ubiquitination at Lys11, Lys20, Lys44, Lys71, Lys92, Lys100, and Lys106
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for UBL7 Gene

Domains for UBL7 Gene

Suggested Antigen Peptide Sequences for UBL7 Gene

Graphical View of Domain Structure for InterPro Entry

Q96S82

UniProtKB/Swiss-Prot:

UBL7_HUMAN :
  • Q96S82
Domain:
  • Contains 1 UBA domain.
  • Contains 1 ubiquitin-like domain.
genes like me logo Genes that share domains with UBL7: view

No data available for Gene Families for UBL7 Gene

Function for UBL7 Gene

Molecular function for UBL7 Gene

UniProtKB/Swiss-Prot Induction: Down-regulated by phorbol myristate acetate (PMA) in bone marrow stroma cells

Gene Ontology (GO) - Molecular Function for UBL7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 16189514
genes like me logo Genes that share ontologies with UBL7: view

Animal Model Products

CRISPR Products

miRNA for UBL7 Gene

miRTarBase miRNAs that target UBL7

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for UBL7

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for UBL7 Gene

Localization for UBL7 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for UBL7 Gene COMPARTMENTS Subcellular localization image for UBL7 gene
Compartment Confidence
cytosol 2
mitochondrion 1
nucleus 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for UBL7 Gene

Pathways for UBL7 Gene

SuperPathways for UBL7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for UBL7 Gene

None

No data available for Pathways by source for UBL7 Gene

Transcripts for UBL7 Gene

Unigene Clusters for UBL7 Gene

Ubiquitin-like 7 (bone marrow stromal cell-derived):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for UBL7

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBL7 Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c · 2d ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b · 13c · 13d · 13e ^
SP1: - - - -
SP2: - -
SP3: - -
SP4: - - -
SP5: - - - - -
SP6: - - - - - - - - -
SP7: - - - - - -
SP8: - - - -
SP9: - - - - - - - - -
SP10: - - - - - - - - - - - - -
SP11: - -

ExUns: 14a · 14b ^ 15a · 15b · 15c
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9: -
SP10:
SP11:

Relevant External Links for UBL7 Gene

GeneLoc Exon Structure for
UBL7
ECgene alternative splicing isoforms for
UBL7

Expression for UBL7 Gene

mRNA expression in normal human tissues for UBL7 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for UBL7 Gene

SOURCE GeneReport for Unigene cluster for UBL7 Gene Hs.334713

mRNA Expression by UniProt/SwissProt for UBL7 Gene

Q96S82-UBL7_HUMAN
Tissue specificity: Ubiquitous. Highly expressed in heart, skeletal muscle, testis, thyroid and adrenal gland.
genes like me logo Genes that share expressions with UBL7: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for UBL7 Gene

Orthologs for UBL7 Gene

This gene was present in the common ancestor of chordates.

Orthologs for UBL7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia UBL7 35
  • 99.13 (n)
  • 99.76 (a)
UBL7 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BMSC-UBP 36
  • 98 (a)
OneToOne
UBL7 35
  • 93.25 (n)
  • 97.63 (a)
dog
(Canis familiaris)
Mammalia UBL7 35
  • 92.54 (n)
  • 96.58 (a)
UBL7 36
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ubl7 35
  • 91.23 (n)
  • 97.63 (a)
Ubl7 16
Ubl7 36
  • 98 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia UBL7 36
  • 90 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia UBL7 36
  • 91 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ubl7 35
  • 90.26 (n)
  • 97.63 (a)
chicken
(Gallus gallus)
Aves gga-mir-6703 36
  • 91 (a)
OneToOne
UBL7 35
  • 79.12 (n)
  • 91.05 (a)
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 94 (a)
OneToMany
-- 36
  • 84 (a)
OneToMany
African clawed frog
(Xenopus laevis)
Amphibia MGC69120 35
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.16741 35
ubl7 35
  • 69.09 (n)
  • 75.74 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.9241 35
zebrafish
(Danio rerio)
Actinopterygii Dr.15396 35
ubl7a 35
  • 70.12 (n)
  • 72.61 (a)
ubl7a 36
  • 71 (a)
OneToMany
ubl7b 36
  • 61 (a)
OneToMany
Species with no ortholog for UBL7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for UBL7 Gene

ENSEMBL:
Gene Tree for UBL7 (if available)
TreeFam:
Gene Tree for UBL7 (if available)

Paralogs for UBL7 Gene

No data available for Paralogs for UBL7 Gene

Variants for UBL7 Gene

Sequence variations from dbSNP and Humsavar for UBL7 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1030889 -- 74,445,608(-) TTTCA(G/T)GGGAA downstream-variant-500B
rs2289187 -- 74,452,058(-) TGACA(A/G)CCAAA intron-variant
rs2289188 -- 74,450,127(-) CCTGT(C/T)ATGGC intron-variant
rs2304554 -- 74,451,349(-) TGGAC(C/T)ATCTT intron-variant
rs2415243 -- 74,454,430(-) caaga(A/G)cgaaa intron-variant

Relevant External Links for UBL7 Gene

HapMap Linkage Disequilibrium report
UBL7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for UBL7 Gene

Disorders for UBL7 Gene

No disorders were found for UBL7 Gene.

No data available for UniProtKB/Swiss-Prot for UBL7 Gene

Publications for UBL7 Gene

  1. Cloning and identification of a novel ubiquitin-like protein, BMSC- UbP, from human bone marrow stromal cells. (PMID: 12644319) Liu S. … Cao X. (Immunol. Lett. 2003) 2 3 4 23
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Solution structure of the ubiquitin-associated domain of human BMSC- UbP and its complex with ubiquitin. (PMID: 16731964) Chang Y.G. … Hu H.Y. (Protein Sci. 2006) 3 4
  4. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen J.V. … Mann M. (Cell 2006) 3 4
  5. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3

Products for UBL7 Gene

Sources for UBL7 Gene

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