Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

UBE2W Gene

protein-coding   GIFtS: 56
GCID: GC08M074692

ubiquitin-conjugating enzyme E2W (putative)

 Explore 3 diseases affiliated with
UBE2W via our new
 Human Malady Compendium 
Biological research products
for UBE2W
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ubiquitin-Conjugating Enzyme E2W (Putative)1 2     UBC162 3
Ubiquitin Carrier Protein W2 3     EC 6.3.2.193 8
Ubiquitin-Conjugating Enzyme 162 3     FLJ110111
Ubiquitin-Protein Ligase W2 3     Ubiquitin-Conjugating Enzyme 2W2
UBC-162 3     Ubiquitin-Conjugating Enzyme E2 W2

External Ids:    HGNC: 256161   Entrez Gene: 552842   Ensembl: ENSG000001043437   OMIM: 6142775   UniProtKB: Q96B023   

Export aliases for UBE2W gene to outside databases

Previous GC identifers: GC08M074866 GC08M074702 GC08M070193


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for UBE2W:
This gene encodes a nuclear-localized ubiquitin-conjugating enzyme (E2) that, along with ubiquitin-activating (E1) and
ligating (E3) enzymes, coordinates the addition of a ubiquitin moiety to existing proteins. The encoded protein
promotes the ubiquitination of Fanconi anemia complementation group proteins and may be important in the repair of DNA
damage. There is a pseudogene for this gene on chromosome 1. Alternative splicing results in multiple transcript
variants. (provided by RefSeq, Aug 2012)

UniProtKB/Swiss-Prot: UBE2W_HUMAN, Q96B02
Function: Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Catalyzes
monoubiquitination. Involved in degradation of misfolded chaperone substrates by mediating monoubiquitination of
STUB1/CHIP, leading to recruitment of ATXN3 to monoubiquitinated STUB1/CHIP, and restriction of the length of
ubiquitin chain attached to STUB1/CHIP substrates by ATXN3. After UV irradiation, but not after mitomycin-C (MMC)
treatment, acts as a specific E2 ubiquitin-conjugating enzyme for the Fanconi anemia complex by associating with E3
ubiquitin-protein ligase FANCL and catalyzing monoubiquitination of FANCD2, a key step in the DNA damage pathway. In
vitro catalyzes 'Lys-11'-linked polyubiquitination




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000008.10  NC_018919.1  NT_008183.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the UBE2W gene promoter:
         STAT5B   AML1a   HNF-4alpha2   STAT5A   Egr-4   HNF-4alpha1   GATA-1   AREB6   deltaCREB   Pax-4a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidUBE2W promoter sequence
   Search SABiosciences Chromatin IP Primers for UBE2W

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UBE2W


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 8q21.11   Ensembl cytogenetic band:  8q21.11   HGNC cytogenetic band: 8q21.11

UBE2W Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
UBE2W gene location

GeneLoc information about chromosome 8         GeneLoc Exon Structure

GeneLoc location for GC08M074692:  view genomic region     (about GC identifiers)

Start:
74,692,332 bp from pter      End:
74,791,145 bp from pter
Size:
98,814 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UBE2W_HUMAN, Q96B02 (See protein sequence)
Recommended Name: Ubiquitin-conjugating enzyme E2 W  
Size: 151 amino acids; 17331 Da
Subunit: Homodimer. Interacts with FANCL. Interacts with STUB1/CHIP (By similarity)
Subcellular location: Nucleus. Note=In the nucleus, colocalizes with FANCL
1 PDB 3D structure from and Proteopedia for UBE2W:
2A7L (3D)    
Secondary accessions: B4DIV1 Q1XBE0 Q9H823 Q9HAG6 Q9NV07
Alternative splicing: 3 isoforms:  Q96B02-1   Q96B02-2   Q96B02-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for UBE2W: NX_Q96B02

Post-translational modifications:

  • Ubiquitinated in vitro in the presence of FANCL (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q96B02

  • 2 DME Specific Peptides for UBE2W (Q96B02)
     LSIISMLS  YSNGHICL 

    UBE2W Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (3 alternative transcripts): 
    NP_001001481.2  NP_001257944.1  NP_060769.4  

    ENSEMBL proteins: 
     ENSP00000428835   ENSP00000428813   ENSP00000414771   ENSP00000397453   ENSP00000430254  
     ENSP00000429136   ENSP00000403764  
    Reactome Protein details: Q96B02
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    R&D Systems Recombinant & Natural Proteins for UBE2W
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Proteins (see all 2): UBE2W
    OriGene Protein Over-expression Lysate (see all 3): UBE2W
    OriGene Custom Protein Services for UBE2W 
    GenScript Custom Purified and Recombinant Proteins Services for UBE2W
    Novus Biologicals UBE2W Proteins
    Novus Biologicals UBE2W Lysates
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for UBE2W
    Uscn Proteins for UBE2W

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--


    UBE2W for ontologies           About GeneDecksing



    UBE2W Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for UBE2W 
    GenScript Custom Superior Antibodies Services for UBE2W
    Novus Biologicals UBE2W Antibodies
    Search for Antibodies for UBE2W at Abcam  
    Uscn Antibodies for UBE2W
    Search ThermoFisher Antibodies for UBE2W

    Assay Products for UBE2W: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for UBE2W
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for UBE2W


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    UBE2W for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR016135 UBQ-conjugating_enzyme/RWD
     IPR000608 UBQ-conjugat_E2

    Graphical View of Domain Structure for InterPro Entry Q96B02

    ProtoNet protein and cluster: Q96B02

    1 Blocks protein family: IPB000608 Ubiquitin-conjugating enzymes

    UniProtKB/Swiss-Prot: UBE2W_HUMAN, Q96B02
    Similarity: Belongs to the ubiquitin-conjugating enzyme family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: UBE2W_HUMAN, Q96B02
    Function: Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Catalyzes
    monoubiquitination. Involved in degradation of misfolded chaperone substrates by mediating monoubiquitination of
    STUB1/CHIP, leading to recruitment of ATXN3 to monoubiquitinated STUB1/CHIP, and restriction of the length of
    ubiquitin chain attached to STUB1/CHIP substrates by ATXN3. After UV irradiation, but not after mitomycin-C (MMC)
    treatment, acts as a specific E2 ubiquitin-conjugating enzyme for the Fanconi anemia complex by associating with E3
    ubiquitin-protein ligase FANCL and catalyzing monoubiquitination of FANCD2, a key step in the DNA damage pathway. In
    vitro catalyzes 'Lys-11'-linked polyubiquitination
    Catalytic activity: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine

    Enzyme Number (IUBMB): EC 6.3.2.191 2

    miRNA
    Products:
        
    OriGene 3'-UTR Clone (see all 2): UBE2W
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat UBE2W
    8/171 QIAGEN miScript miRNA Assays for microRNAs that regulate UBE2W (see all 171):
    hsa-miR-376b hsa-miR-631 hsa-miR-106a hsa-miR-199a-3p hsa-miR-938 hsa-miR-128 hsa-miR-138-2* hsa-miR-519a
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for UBE2W (see all 4)
    OriGene shRNA RFP: UBE2W
    OriGene siRNA: UBE2W
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UBE2W

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for UBE2W

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UBE2W (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UBE2W (see all 3)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): UBE2W (NM_018299)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for UBE2W
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UBE2W 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for UBE2W
    Search LifeMap BioReagents cell lines for UBE2W

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UBE2W

    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004842ubiquitin-protein ligase activity IMP--
    GO:0005524ATP binding IEA--
    GO:0016881acid-amino acid ligase activity ----
    GO:0031625ubiquitin protein ligase binding IPI19111657


    UBE2W for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for UBE2W:
     Increased number of cells in m 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Antigen processing: Ubiquitination & Proteasome degradation
    Antigen processing: Ubiquitination & Proteasome degradation1.00
    Polyubiquitination of substrate0.75
    Class I MHC mediated antigen processing & presentation0.83
    Ubiquitin mediated proteolysis0.36
    2Immune System
    Immune System1.00
    Adaptive Immune System0.59

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    5        Reactome Pathways for UBE2W
        Antigen processing: Ubiquitination & Proteasome degradation
    Polyubiquitination of substrate
    Adaptive Immune System
    Class I MHC mediated antigen processing & presentation
    Immune System


    1         Kegg Pathway  (Kegg details for UBE2W):
        Ubiquitin mediated proteolysis

    UniProtKB/Swiss-Prot: UBE2W_HUMAN, Q96B02
    Pathway: Protein modification; protein ubiquitination


    UBE2W for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for UBE2W

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/83 Interacting proteins for UBE2W (Q96B022, 3 ENSP000003974534) via UniProtKB, MINT, STRING, and/or I2D (see all 83)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    POLR2CP193872, 3, ENSP000002192524MINT-63530 I2D: score=5 STRING: ENSP00000219252
    AKR1C3P423302, 3MINT-63740 I2D: score=5 
    DNMT3BQ9UBC32, 3MINT-8276321 I2D: score=2 
    EEDO755302, 3MINT-8276332 I2D: score=2 
    MKRN1Q9UHC72, 3, ENSP000002559774MINT-8276343 I2D: score=2 STRING: ENSP00000255977
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006281DNA repair IEA--
    GO:0006513protein monoubiquitination IMP--
    GO:0006515misfolded or incompletely synthesized protein catabolic process ISS--
    GO:0043161proteasomal ubiquitin-dependent protein catabolic process ISS--
    GO:0070979protein K11-linked ubiquitination IDA--


    UBE2W for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for UBE2W

    4 HMDB Compounds for UBE2W    About this table
    CompoundSynonyms CAS #PubMed Ids
    Adenosine monophosphate5'-AMP (see all 28)61-19-8--
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    Phosphoric acidacide phosphorique (FRENCH) (see all 20)7664-38-2--
    Pyrophosphate(4-)Diphosphoric acid ion (see all 10)14000-31-8--
    Search CenterWatch for drugs/clinical trials and news about UBE2W 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for UBE2W gene (4 alternative transcripts): 
    NM_001001481.2  NM_001271015.1  NM_018299.4  NM_001001482.1  

    Unigene Cluster for UBE2W:

    Ubiquitin-conjugating enzyme E2W (putative)
    Hs.128841  [show with all ESTs]
    Unigene Representative Sequence: NM_001001481
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000523278 ENST00000517608(uc003xzu.3 uc003xzv.3) ENST00000422906(uc003xzw.3)
    ENST00000419880 ENST00000519277 ENST00000519255 ENST00000453587(uc003xzt.2)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone (see all 2): UBE2W
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat UBE2W
    8/171 QIAGEN miScript miRNA Assays for microRNAs that regulate UBE2W (see all 171):
    hsa-miR-376b hsa-miR-631 hsa-miR-106a hsa-miR-199a-3p hsa-miR-938 hsa-miR-128 hsa-miR-138-2* hsa-miR-519a
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for UBE2W (see all 4)
    OriGene shRNA RFP: UBE2W
    OriGene siRNA: UBE2W
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UBE2W
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UBE2W (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UBE2W (see all 3)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 2): UBE2W (NM_018299)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for UBE2W
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UBE2W 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UBE2W
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat UBE2W
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UBE2W
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UBE2W

    Additional cDNA sequence: 

    AK001873.1 AK021735.1 AK024050.1 AK123531.1 AK225554.1 AK295792.1 AL833723.1 AY948289.1 
    BC010900.1 BC016326.1 BX538145.1 BX648427.1 CR457275.1 NR_073119.1 NR_073120.1 NR_073121.1 

    12 DOTS entries:

    DT.100821509  DT.100640421  DT.212257  DT.102842  DT.75189561  DT.40127576  DT.95375728  DT.100821506 
    DT.65287833  DT.95315344  DT.212259  DT.40250693 

    24/446 AceView cDNA sequences (see all 446):

    Z40600 BU178550 AW242030 F01972 AI301037 AA252578 AI351764 AI359541 
    AL600889 NM_018299 BX399252 CA311925 AA593175 AL708648 BI553990 AA813913 
    BG941862 BC016326 BM682964 BQ721043 N51374 BU150974 AA256013 AI040886 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for UBE2W    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b
    SP1:                                                      
    SP2:              -                                       
    SP3:              -           -                           


    ECgene alternative splicing isoforms for UBE2W

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    UBE2W expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See UBE2W Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for UBE2W

    SOURCE GeneReport for Unigene cluster: Hs.128841

    UniProtKB/Swiss-Prot: UBE2W_HUMAN, Q96B02
    Tissue specificity: Widely expressed, with highest expression in brain, liver, pancreas and heart

        SABiosciences Expression via Pathway-Focused PCR Array including UBE2W: 
              Ubiquitination (Ubiquitylation) Pathway in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UBE2W
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat UBE2W
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UBE2W
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UBE2W
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UBE2W

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for UBE2W gene from 8/24 species (see all 24)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Ube2w1 , 5 ubiquitin-conjugating enzyme E2W (putative)1, 5 94.07(n)1
    95.56(a)1
      1 (5.10 cM)5
    667991  NM_025773.31  NP_080049.21 
     165697825 
    chicken
    (Gallus gallus)
    Aves UBE2W1 ubiquitin-conjugating enzyme E2W (putative) 90.95(n)
    99.34(a)
      420185  NM_001199481.1  NP_001186410.1 
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.199992 Transcribed sequence with strong similarity to protein more 85.94(n)    AL890226.2 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.176652 Danio rerio clone RK115A3B02 hypothetical protein FLJ11 more 83.05(n)    AY398346.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG72201 CG7220 65.07(n)
    72.6(a)
      36129  NM_136760.3  NP_610604.3 
    worm
    (Caenorhabditis elegans)
    Secernentea ubc-161 Protein UBC-16 58.85(n)
    61.38(a)
      173354  NM_061186.3  NP_493587.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons UBC161 putative ubiquitin-conjugating enzyme E2 16 59.71(n)
    53.96(a)
      843880  NM_106198.4  NP_565110.1 
    rice
    (Oryza sativa)
    Liliopsida --
    --
    ubiquitin-conjugating enzyme E2 W, putative, expre...
    ubiquitin-conjugating enzyme E2 W, putative, expre...
    48(a)
    48(a)
    many ↔ many
    many ↔ many
    12(27261821-27265138)
    3(27104494-27109585)


    ENSEMBL Gene Tree for UBE2W (if available)
    TreeFam Gene Tree for UBE2W (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for UBE2W gene
    UBE2D32  ENSG000002586772  UBE2L62  UBE2D12  UBE2D22  UBE2E32  UBE2D42  UBE2E12  
    UBE2E22  UBE2L32  
    14 SIMAP similar genes for UBE2W using alignment to 5 protein entries:     UBE2W_HUMAN (see all proteins):
    UBE2N    UBE2E3    UBE2E2    UBE2E1    UBE2B    HR6A
    UBE2A    UBE2D4    UBE2C    UBE2D2    UBE2D3    UBE2I
    UBE2D1    UBE2L6

    UBE2W for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for UBE2W
    PGOHUM00000259569


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1665 NCBI SNPs in UBE2W are shown (see all 1665    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 8 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs113186651,2
    C--70253834(+) AAAAA-/ACAGGA 1 -- int1 trp32Minor allele frequency- A:0.25NA 4
    rs1418288791,2
    --74691847(+) AAGAAA/TTGTTT 1 -- ds50010--------
    rs1125236501,2
    --74691855(+) TTTTTT/CGAGCT 1 -- ds50012Minor allele frequency- C:0.21CSA WA 120
    rs1506274601,2
    --74691929(+) CTCACA/GTGTGC 1 -- ds50010--------
    rs767175961,2
    --74691951(+) CTGCAT/CGAAAC 1 -- ds50012Minor allele frequency- C:0.21CSA WA 120
    rs733226311,2
    C,F,--74692097(+) CTTGAC/ACCTAC 1 -- ds50015Minor allele frequency- A:0.09WA CSA EA 244
    rs1840614971,2
    --74692130(+) AAAATC/GTATCA 1 -- ds50010--------
    rs1422385991,2
    --74692150(+) CCAGT-/AAAGGA
            
    AATGT
    1 -- ds50010--------
    rs1439023581,2
    --74692284(+) ATAGTA/GTGTGT 1 -- ds50010--------
    rs766520311,2
    --74692333(+) GGATGA/CCTTAA 1 -- ut312Minor allele frequency- C:0.21CSA WA 120

    HapMap Linkage Disequilibrium report for UBE2W (74692332 - 74791145 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for UBE2W
         1 Indel: 10914

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UBE2W
    DNA2.0 Custom Variant and Variant Library Synthesis for UBE2W

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    UBE2W for disorders           About GeneDecksing

    OMIM gene information: 614277    OMIM disorders: --

    3 diseases for UBE2W:    About MalaCards
    fanconi's anemia    anemia    malaria


    Export disorders for UBE2W gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for UBE2W gene, integrated from 9 sources (see all 24):
    (articles sorted by number of sources associating them with UBE2W)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. UBE2W interacts with FANCL and regulates the monoubiq uitination of Fanconi anemia protein FANCD2. (PubMed id 21229326)1, 2 Zhang Y....Huang P. (2011)
    2. Mechanistic insight into site-restricted monoubiquitination of FANCD2 by Ube2t, FANCL, and FANCI. (PubMed id 19111657)1, 2 Alpi A.F....Patel K.J. (2008)
    3. Cloning, characterization and subcellular localization of a gene encoding a human Ubiquitin-conjugating enzyme (E2) homologous to the Arabidopsis thaliana UBC-16 gene product. (PubMed id 16368532)1, 2 Yin G....Mao Y. (2006)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1, 3 Strausberg R.L....Marra M.A. (2002)
    7. E2-BRCA1 RING interactions dictate synthesis of mono- or specific polyubiquitin chain linkages. (PubMed id 17873885)1, 9 Christensen D.E....Klevit R.E. (2007)
    8. Profiling of autoantibodies in IgA nephropathy, an int egrative antibiomics approach. (PubMed id 22157707)1 Sigdel T.K....Lafayette R.A. (2011)
    9. E3 ligases determine ubiquitination site and conjugat e type by enforcing specificity on E2 enzymes. (PubMed id 21965653)1 David Y....Navon A. (2011)
    10. A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206)1 Vinayagam A....Wanker E.E. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 55284 HGNC: 25616 AceView: STAU2andFLJ11011 Ensembl:ENSG00000104343 euGenes: HUgn55284
    ECgene: UBE2W Kegg: 55284 H-InvDB: UBE2W

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for UBE2W Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for UBE2W gene:
    Search GeneIP for patents involving UBE2W

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Recombinant/Natural Proteins for UBE2W (UBE2W)  
     Browse OriGene Antibodies   OriGene shRNA RFP for UBE2W  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for UBE2W   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for UBE2W  
     OriGene Protein Over-expression Lysate for UBE2W   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for UBE2W   OriGene 3'-UTR Clone for UBE2W  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for UBE2W   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for UBE2W  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for UBE2W   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for UBE2W   OriGene Custom Protein Services for UBE2W  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat UBE2W
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing UBE2W
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UBE2W
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat UBE2W
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat UBE2W
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat UBE2W
     GenScript Custom Purified and Recombinant Proteins Services for UBE2W GenScript cDNA clones with any tag delivered in your preferred vector for UBE2W
     GenScript Custom Assay Services for UBE2W GenScript Custom Superior Antibodies Services for UBE2W
     GenScript Custom overexpressing Cell Line Services for UBE2W CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in UBE2W promoter
     Search Chromatin IP Primers for UBE2W
     RT2 qPCR Primer Assay in human, mouse, rat UBE2W
     Search GNC Networks for UBE2W
     SABiosciences PCR Arrays including human, mouse, rat UBE2W
     Search Tocris compounds for UBE2W
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     UBE2W antibodies
     UBE2W proteins
     UBE2W lysates
     Search for Antibodies for UBE2W at Abcam
     See all of Abcam's Antibodies, Kits and Proteins for UBE2W
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Recombinant Protein for UBE2W




     UBE2W Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for UBE2W
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UBE2W
     Browse SwitchGear 3'UTR luciferase reporter plasmids for UBE2W
     SwitchGear Promoter luciferase reporter plasmids for UBE2W
     Search ThermoFisher Antibodies for UBE2W
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UBE2W
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      UBE2W gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4