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Aliases & Descriptions for UBE2V2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| DDVIT1 2 | | DDVit-1 1, 2 | | EDAF-1 2 | | EDPF-1 1, 2, 3 | | EDPF1 2 | | MMS2 1, 2, 3 | | UEV-2 1, 2 | | UEV2 2, 3 |
| | | Descriptions |
|---|
| 1 alpha,25-dihydroxyvitamin D3-inducible 2 | | DDVit 1 3 | | Enterocyte differentiation-associated factor EDAF-1 3 | | Enterocyte differentiation-promoting factor 3 | | Vitamin D3-inducible protein 3 | | enterocyte differentiation promoting factor 2 | methyl methanesulfonate sensitive 2, S. cerevisiae, homolog of 2 | | ubiquitin-conjugating enzyme E2 variant 2 2 | | ubiquitin-conjugating enzyme E2v2 2 |
|
| | Search outside databases for aliases for UBE2V2 genePrevious GC identifers: GC08P048012 GC08P048925 GC08P048644 GC08P048970 |
Summaries for UBE2V2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for UBE2V2: Ubiquitin-conjugating enzyme E2 variant proteins constitute a distinct subfamily within the E2 protein family. They have sequence similarity to other ubiquitin-conjugating enzymes but lack the conserved cysteine residue that is critical for the catalytic activity of E2s. The protein encoded by this gene also shares homology with ubiquitin-conjugating enzyme E2 variant 1 and yeast MMS2 gene product. It may be involved in the differentiation of monocytes and enterocytes. [provided by RefSeq] UniProtKB/Swiss-Prot: UB2V2_HUMAN, Q15819Function: Has no ubiquitin ligase activity on its own. The UBE2V2/UBE2N heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damageGene Wiki entry for UBE2V2 |
Genomic Location for UBE2V2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the UBE2V2 gene 
Entrez Gene cytogenetic band: 8q11.21 Ensembl cytogenetic band: 8q11.21 HGNC cytogenetic band: 8q11.21UBE2V2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 8 GeneLoc Exon Structure GeneLoc location for GC08P049083:
(about GC identifiers)
Start:
|
49,083,548 bp from pter |
End:
|
49,137,007 bp from pter |
Size:
|
53,460 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000008.9 NT_008183.18
| Proteins for UBE2V2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: UB2V2_HUMAN, Q15819 (See
protein sequence)Recommended Name: Ubiquitin-conjugating enzyme E2 variant 2 Size: 145 amino acids; 16363 Da
Subunit: Heterodimer with UBE2N. Binds CHFR
PDB structures from and Proteopedia :1J74 (3D)
 1J7D (3D)
 1ZGU (3D)
 REFSEQ proteins: NP_003341.1
ENSEMBL proteins: ENSP00000326473
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: UBE2V2 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for UBE2V2: Assays for UBE2V2: | Protein
Domains/ Families for UBE2V2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q15819
ProtoNet protein and cluster: Q15819 1 Blocks protein family: IPB000608 Ubiquitin-conjugating enzymes
UniProtKB/Swiss-Prot: UB2V2_HUMAN, Q15819Similarity: Belongs to the ubiquitin-conjugating enzyme family | Gene Function for UBE2V2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003350
Applied Biosystems Silencer® siRNAs for UBE2V2
Sigma-Aldrich siRNA and siRNA Panels for UBE2V2  Sigma-Aldrich shRNA Panels and shRNA for UBE2V2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_003350                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003350                                  untagged cDNA clone in CMV expression vector: NM_003350 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003350
UniProtKB/Swiss-Prot: UB2V2_HUMAN, Q15819Function: Has no ubiquitin ligase activity on its own. The UBE2V2/UBE2N heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damageInduction: Up-regulated in cultured fresh blood cells upon treatment with vitamin D3Genatlas biochemistry entry for UBE2V2:ubiquitin conjugating enzyme E2 variant 2,expressed in monocytes and in some cancer lines,putatively involved in the control of differentiation2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for UBE2V2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for UBE2V2 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for UBE2V2 
5/19 Interacting proteins for UBE2V2 (Q158191, 2 ENSP000003264733) via UniProtKB, MINT, and/or STRING (see all 19
)About this table
5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
): About this table
|
Drugs & Compounds for UBE2V2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for UBE2V2
|
Transcripts for UBE2V2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003350
Sigma-Aldrich siRNA and siRNA Panels for UBE2V2  Sigma-Aldrich shRNA Panels and shRNA for UBE2V2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_003350 REFSEQ mRNAs for UBE2V2 gene: NM_003350.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003350               OriGene GFP tagged cDNA clone in CMV expression vector: NM_003350                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003350                                  untagged cDNA clone in CMV expression vector: NM_003350  Additional cDNA sequence: AF049140.1 AK094617.1 AK313447.1 BC007051.1 BC016332.1 BC016710.1 BC028673.1 BC062418.1 BT006744.1 CR407628.1 CR603464.1 CR603543.1 U62136.2 X98091.1 24/25 DOTS entries (see all 25
): DT.92468578 DT.99975199 DT.92468536 DT.310202 DT.91999321 DT.92468530 DT.100827881 DT.100827885 DT.92468535 DT.100827883 DT.95284972 DT.100827884 DT.100827877 DT.121485744 DT.121485844 DT.121485861 DT.92468588 DT.95284962 DT.95284984 DT.100827873 DT.121485750 DT.95284971 DT.95284988 DT.99980382 24/1109 AceView cDNA sequences (see all 1109
):BE698527 AI055876 AV708041 AW246621 BE504258 BM833841 BM719387 BF589541 AW024676 CA441431 AI253060 BU567372 BE698521 BU677186 BP347509 AI202679 F11561 BU508785 AI763271 BU928473 CB127259 AA776914 BM477255 BG533577
highest scoring ESTs for UBE2V2:AF049140 AA071363 AA102842 AA102843 AA129335 AA148454 AA148455 AA160935 AA164942 AA195549 Unigene Cluster for UBE2V2: Ubiquitin-conjugating enzyme E2 variant 2 Hs.491695 [show with all ESTs]Unigene Representative Sequence: AK094617
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for UBE2V2
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | - |   | |   | |   | |   | |
| SP3: | |   | |   | - |   | |   | - |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for UBE2V2
1 Ensembl transcript including schematic representation: ENST00000324746
|
Expression for UBE2V2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| UBE2V2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for UBE2V2
1 / 2 / 3 3 probe-sets matching UBE2V2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CATTTAAGTT
SOURCE GeneReport for Unigene cluster: Hs.491695
Expression variation in blood from EXPOLDB for UBE2V2 UniProtKB/Swiss-Prot: UB2V2_HUMAN, Q15819Tissue specificity: Detected in placenta, colon, liver and skin. Detected at very low levels in most tissues |
Orthologs for UBE2V2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for UBE2V2 gene from 5/18 species (see all 18
)
About this table Species with no ortholog for UBE2V2
ENSEMBL Gene Tree for UBE2V2 | Paralogs for UBE2V2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for UBE2V2 gene
- TMEM1892
Pseudogenes
- 8 related pseudogenes
|
SNPs/Variants for UBE2V2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for UBE2V2 (up to first 250kb)
|
Disorders & Mutations for UBE2V2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 603001
|
Medical News for UBE2V2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for UBE2V2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/28 PubMed articles for UBE2V2 gene (see all 28
):- Molecular cloning of a 1alpha,25-dihydroxyvitamin D3-inducible transcript (DDVit 1) in human blood monocytes. (PubMed id 9199207)2, 3, 4 Fritsche J....Kreutz M. (1997)
- The products of the yeast MMS2 and two human homologs (hMMS2 and CROC-1) define a structurally and functionally conserved Ubc-like protein family. (PubMed id 9705497)1, 3, 4 Xiao W.... Wei Y.-F. (1998)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- The Chfr mitotic checkpoint protein functions with Ubc13-Mms2 to form Lys63-linked polyubiquitin chains. (PubMed id 14562038)3, 4 Bothos J.... Halazonetis T.D. (2003)
- Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. (PubMed id 12665801)3, 4 Gevaert K.... Vandekerckhove J. (2003)
- Crystal structure of the human ubiquitin conjugating enzyme complex, hMms2-hUbc13. (PubMed id 11473255)3, 4 Moraes T.F.... Ellison M.J. (2001)
- Noncanonical MMS2-encoded ubiquitin-conjugating enzyme functions in assembly of novel polyubiquitin chains for DNA repair. (PubMed id 10089880)3, 4 Hofmann R.M. and Pickart C.M. (1999)
- Role of UEV-1, an inactive variant of the E2 ubiquitin-conjugating enzymes, in in vitro differentiation and cell cycle behavior of HT-29- M6 intestinal mucosecretory cells. (PubMed id 9418904)2, 3 Sancho E.... Thomson T.M. (1998)
- Main chain and side chain dynamics of the ubiquitin conjugating enzyme variant human Mms2 in the free and ubiquitin-bound States. (PubMed id 15952783)1, 3 Spyracopoulos L....Saltibus L.F. (2005)
- UBE2V2 (MMS2) is not required for effective immunoglobulin gene conversion or DNA damage tolerance in DT40. (PubMed id 15725630)1, 3 Simpson L.J. and Sale J.E. (2005)
|
Search for UBE2V2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing UBE2V2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing UBE2V2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing UBE2V2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for UBE2V2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
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