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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

UBE2V1 Gene

protein-coding   GIFtS: 60
GCID: GC20M048698

ubiquitin-conjugating enzyme E2 variant 1


(Previous symbol: UBE2V)
 Explore 9 diseases affiliated with
UBE2V1 via our new
 Human Malady Compendium 
Biological research products
for UBE2V1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Ubiquitin-Conjugating Enzyme E2 Variant 11 2     UEV12 3 5
CROC-11 2 3     UEV1A1 2
CROC11 2 3     TRAF6-Regulated IKK Activator 1 Beta Uev1A2 3
UBE2V1 2 3     CIR12
UEV-11 2 3     DNA-Binding Protein2

External Ids:    HGNC: 124941   Entrez Gene: 73352   Ensembl: ENSG000002446877   OMIM: 6029955   UniProtKB: Q134043   

Export aliases for UBE2V1 gene to outside databases

Previous GC identifers: GC20M048426 GC20M049336 GC20M049383 GC20M048132 GC20M045447


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for UBE2V1:
Ubiquitin-conjugating E2 enzyme variant proteins constitute a distinct subfamily within the E2 protein family. They
have sequence similarity to other ubiquitin-conjugating enzymes but lack the conserved cysteine residue that is
critical for the catalytic activity of E2s. The protein encoded by this gene is located in the nucleus and can cause
transcriptional activation of the human FOS proto-oncogene. It is thought to be involved in the control of
differentiation by altering cell cycle behavior. Alternatively spliced transcript variants encoding multiple isoforms
have been described for this gene, and multiple pseudogenes of this gene have been identified. Co-transcription of
this gene and the neighboring upstream gene generates a rare transcript (Kua-UEV), which encodes a fusion protein
comprised of sequence sharing identity with each individual gene product. (provided by RefSeq, Apr 2012)

UniProtKB/Swiss-Prot: UB2V1_HUMAN, Q13404
Function: Has no ubiquitin ligase activity on its own. The UBE2V1-UBE2N heterodimer catalyzes the synthesis of
non-canonical poly-ubiquitin chains that are linked through Lys-63. This type of poly-ubiquitination activates IKK and
does not seem to involve protein degradation by the proteasome. Plays a role in the activation of NF-kappa-B mediated
by IL1B, TNF, TRAF6 and TRAF2. Mediates transcriptional activation of target genes. Plays a role in the control of
progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes
to the survival of cells after DNA damage. Promotes TRIM5 capsid-specific restriction activity and the UBE2V1-UBE2N
heterodimer acts in concert with TRIM5 to generate 'Lys-63'-linked polyubiquitin chains which activate the MAP3K7/TAK1
complex which in turn results in the induction and expression of NF-kappa-B and MAPK-responsive inflammatory genes

Gene Wiki entry for UBE2V1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000020.10  NC_018931.1  NT_011362.10  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the UBE2V1 gene promoter:
         NF-kappaB1   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for UBE2V1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat UBE2V1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 20q13.2   Ensembl cytogenetic band:  20q13.13   HGNC cytogenetic band: 20q13.2

UBE2V1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
UBE2V1 gene location

GeneLoc information about chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20M048698:  view genomic region     (about GC identifiers)

Start:
48,697,661 bp from pter      End:
48,732,496 bp from pter
Size:
34,836 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: UB2V1_HUMAN, Q13404 (See protein sequence)
Recommended Name: Ubiquitin-conjugating enzyme E2 variant 1  
Size: 147 amino acids; 16495 Da
Subunit: Heterodimer with UBE2N. Interacts (UBE2V2-UBE2N heterodimer) with the E3 ligase STUB1 (via the U-box domain);
the complex has a specific 'Lys-63'-linked polyubiquitination activity. Interacts with TRAF6
Subcellular location: Nucleus. Note=Excluded from the nucleolus
Miscellaneous: In human, TMEM189/KUA and UBE2V1/UEV1 are adjacent genes which can produce independent proteins and can
also be fused to form a TMEM189-UBE2V1 hybrid protein
Sequence caution: Sequence=AAH08944.2; Type=Erroneous initiation; Sequence=CAC16955.2; Type=Erroneous initiation;
Note=Translation N-terminally shortened;
3 PDB 3D structures from and Proteopedia for UBE2V1:
2A4D (3D)        2C2V (3D)        2HLW (3D)    
Secondary accessions: E1P629 Q13403 Q13532 Q5TGE0 Q5TGE3 Q96H34 Q9GZT0 Q9GZW1 Q9H4J3 Q9H4J4 Q9UKL1
Q9UM48 Q9UM49 Q9UM50
Alternative splicing: 6 isoforms:  Q13404-4   Q13404-1   Q13404-2   Q13404-6   Q13404-7   Q13404-8   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for UBE2V1: NX_Q13404

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q13404

  • UBE2V1 Protein expression data from MOPED and PaxDb:    About this image 
    UBE2V1 Protein Expression
    REFSEQ proteins (11 alternative transcripts): 
    NP_001027459.1  NP_001244322.1  NP_001244323.1  NP_001244324.1  NP_001244325.1  NP_001244326.1  NP_001244327.1  NP_001244328.1  
    NP_068823.2  NP_071887.1  NP_954595.1  

    ENSEMBL proteins: 
     ENSP00000360720   ENSP00000360739   ENSP00000340305   ENSP00000407770   ENSP00000360742  
     ENSP00000421351   ENSP00000395264  
    Reactome Protein details: Q13404
    Human Recombinant Protein Products for UBE2V1: 
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    Novus Biologicals UBE2V1 Proteins
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    Uscn Proteins for UBE2V1

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000151ubiquitin ligase complex IDA16307917
    GO:0005634nucleus TAS9305758
    GO:0005737cytoplasm IDA16129784
    GO:0005829cytosol TAS--
    GO:0031371ubiquitin conjugating enzyme complex IDA16129784

    UBE2V1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    UBE2V1 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR016135 UBQ-conjugating_enzyme/RWD
     IPR000608 UBQ-conjugat_E2

    Graphical View of Domain Structure for InterPro Entry Q13404

    ProtoNet protein and cluster: Q13404

    1 Blocks protein family: IPB000608 Ubiquitin-conjugating enzymes

    UniProtKB/Swiss-Prot: UB2V1_HUMAN, Q13404
    Similarity: Belongs to the ubiquitin-conjugating enzyme family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: UB2V1_HUMAN, Q13404
    Function: Has no ubiquitin ligase activity on its own. The UBE2V1-UBE2N heterodimer catalyzes the synthesis of
    non-canonical poly-ubiquitin chains that are linked through Lys-63. This type of poly-ubiquitination activates IKK and
    does not seem to involve protein degradation by the proteasome. Plays a role in the activation of NF-kappa-B mediated
    by IL1B, TNF, TRAF6 and TRAF2. Mediates transcriptional activation of target genes. Plays a role in the control of
    progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes
    to the survival of cells after DNA damage. Promotes TRIM5 capsid-specific restriction activity and the UBE2V1-UBE2N
    heterodimer acts in concert with TRIM5 to generate 'Lys-63'-linked polyubiquitin chains which activate the MAP3K7/TAK1
    complex which in turn results in the induction and expression of NF-kappa-B and MAPK-responsive inflammatory genes
    Induction: Down-regulated during differentiation of cultured colon adenocarcinoma cells

         Genatlas biochemistry entry for UBE2V1:
    ubiquitin conjugating enzyme E2 variant 1,expressed as at least four isoforms,transcriptional activator of FOS
    promoter,underexpressed in hormone refractory prostate cancer,potentially involved in the control of differentiation

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI19549727
    GO:0016881acid-amino acid ligase activity IEA--
         
    UBE2V1 for ontologies           About GeneDecksing


    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for UBE2V1 

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    8/33 QIAGEN miScript miRNA Assays for microRNAs that regulate UBE2V1 (see all 33):
    hsa-miR-576-3p hsa-miR-140-5p hsa-miR-607 hsa-miR-429 hsa-miR-15a hsa-miR-513a-5p hsa-miR-128 hsa-miR-219-5p
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/15 super-pathways (see all 15About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1TRAF6 Mediated Induction of proinflammatory cytokines
    8/17 pathways (see all 17)
    Toll Like Receptor 10 (TLR10) Cascade0.86
    Toll Like Receptor 2 (TLR2) Cascade0.78
    Toll Like Receptor 5 (TLR5) Cascade0.86
    MyD88:Mal cascade initiated on plasma membrane0.78
    MyD88 cascade initiated on plasma membrane0.86
    TRIF-mediated TLR3/TLR4 signaling 0.73
    TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation0.85
    MyD88-independent cascade 0.72
    2IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation
    IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation1.00
    Ubiquitination of NEMO by TRAF60.56
    IRAK1 recruits IKK complex1.00
    TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling0.40
    3Antigen processing: Ubiquitination & Proteasome degradation
    Antigen processing: Ubiquitination & Proteasome degradation1.00
    Polyubiquitination of substrate0.75
    Class I MHC mediated antigen processing & presentation0.83
    4Immune System
    Immune System1.00
    Innate Immune System0.46
    Adaptive Immune System0.59
    5Immune response_IL-1 signaling pathway
    Immune response_IL-1 signaling pathway1.00
    Immune response IL-1 signaling pathway0.98

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    2 EMD Millipore Pathways for UBE2V1
        Proteolysis Putative ubiquitin pathway
    Immune response IL-1 signaling pathway

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for UBE2V1
        Ubiquitin-Proteasome Dependent Proteolysis
    Remodeling of Adherens Junctions
    Toll-Like Receptors Pathway

    2 GeneGo (Thomson Reuters) Pathways for UBE2V1
        Proteolysis Putative ubiquitin pathway
    Immune response IL-1 signaling pathway

    1 BioSystems Pathway for UBE2V1 
        IL1-mediated signaling events

    5/35        Reactome Pathways for UBE2V1 (see all 35)
        IKK complex recruitment mediated by RIP1
    Toll Like Receptor 2 (TLR2) Cascade
    Toll Like Receptor TLR6:TLR2 Cascade
    Toll Like Receptor 3 (TLR3) Cascade
    MyD88-independent cascade



    UBE2V1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for UBE2V1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/46 Interacting proteins for UBE2V1 (Q134041, 2, 3 ENSP000003403054) via UniProtKB, MINT, STRING, and/or I2D (see all 46)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    UBE2NP610881, 2, 3, ENSP000003161764EBI-1050671,EBI-1052908 MINT-50197 I2D: score=5 STRING: ENSP00000316176
    ZNRF1Q8ND251, 3, ENSP000003350914EBI-1050671,EBI-2129250 I2D: score=2 STRING: ENSP00000335091
    XIAPP981701, 3, ENSP000003478584EBI-1050671,EBI-517127 I2D: score=2 STRING: ENSP00000347858
    BIRC8Q96P093, ENSP000004129574I2D: score=2 STRING: ENSP00000412957
    MKRN3Q130643, ENSP000003138814I2D: score=2 STRING: ENSP00000313881
    About this table

    Gene Ontology (GO): 5/18 biological process terms (GO ID links to tree view) (see all 18):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000209protein polyubiquitination TAS10089880
    GO:0002224toll-like receptor signaling pathway TAS--
    GO:0002755MyD88-dependent toll-like receptor signaling pathway TAS--
    GO:0006282regulation of DNA repair TAS10089880
    GO:0006355regulation of transcription, DNA-dependent TAS9305758

    UBE2V1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for UBE2V1
    Search CenterWatch for drugs/clinical trials and news about UBE2V1 / UB2V1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for UBE2V1 gene (11 alternative transcripts): 
    NM_001032288.2  NM_001257393.1  NM_001257394.1  NM_001257395.1  NM_001257396.1  NM_001257397.1  NM_001257398.1  NM_001257399.1  
    NM_021988.5  NM_022442.5  NM_199144.2  

    Unigene Cluster for UBE2V1:

    Ubiquitin-conjugating enzyme E2 variant 1
    Hs.420529  [show with all ESTs]
    Unigene Representative Sequence: NM_199203
    18/21 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 21):
    ENST00000371657 ENST00000396059 ENST00000371674(uc002xvb.3 uc002xva.3)
    ENST00000340309(uc002xve.3) ENST00000415862 ENST00000371677(uc002xvd.3)
    ENST00000483534 ENST00000486653 ENST00000490555 ENST00000493090 ENST00000467839
    ENST00000472923 ENST00000432266 ENST00000470565 ENST00000490289 ENST00000461960
    ENST00000462217 ENST00000473860

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    Additional cDNA sequence: 

    AB044550.1 AF049671.1 AF155120.1 AK023028.1 AK304595.1 AK314754.1 AY008273.1 BC000468.2 
    BC005215.1 BC008944.2 BC018893.2 BC142966.1 BC144612.1 BT007382.1 BX647511.1 BX648147.1 
    NR_027889.1 NR_047553.1 NR_047554.1 NR_047555.1 NR_047556.1 U39360.1 U97280.1 U97281.1 

    24/65 DOTS entries (see all 65):

    DT.87017867  DT.100881989  DT.100881988  DT.86999436  DT.95190771  DT.100882004  DT.91927742  DT.101965698 
    DT.95279545  DT.97799662  DT.320480  DT.100758874  DT.100672690  DT.95108243  DT.100881995  DT.100881998 
    DT.120838136  DT.100881974  DT.75156062  DT.100881992  DT.120837985  DT.40305392  DT.97859427  DT.92467447 

    24/1050 AceView cDNA sequences (see all 1050):

    BG943639 BG105425 BU628670 CR612804 AI872729 BU955838 AL547316 AA641136 
    BM792698 CR597636 CR615526 BE619076 NM_022442 BQ889364 AA808342 BG034562 
    BM994499 AA972662 CR615402 CR607429 AI056308 CR596657 N56622 BQ004312 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    UBE2V1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCTTGGTTTT
    UBE2V1 Expression
    About this image
    See UBE2V1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for UBE2V1

    SOURCE GeneReport for Unigene cluster: Hs.420529

    UniProtKB/Swiss-Prot: UB2V1_HUMAN, Q13404
    Tissue specificity: Highly expressed in thyroid, pancreas, spinal cord, lymph node, trachea, adrenal gland, bone marrow
    and pancreas. Detected at low levels in heart, breast, placenta, brain, liver, kidney, stomach and lung

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for UBE2V1 gene from 8/23 species (see all 23)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves UBE2V11 ubiquitin-conjugating enzyme E2 variant 1 91.72(n)
    99.31(a)
      100538349  NM_001205097.1  NP_001192026.1 
    lizard
    (Anolis carolinensis)
    Reptilia UBE2V16
    --
    95(a)
    1 → many
    4(147633606-147637769)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.159692 Xenopus laevis, Similar to ubiquitin-conjugating enzyme more 83.82(n)    BC045066.1 
    zebrafish
    (Danio rerio)
    Actinopterygii ube2v11 ubiquitin-conjugating enzyme E2 variant 1 74.6(n)
    88.44(a)
      641324  NM_001037402.1  NP_001032479.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Uev1A1 , 3 ubiquitin conjugating enzyme3
    CG10640-PA1
    67(a)3
    59.31(n)1
    66.9(a)1
      64D13
    386131  NM_139702.31  NP_647959.11 
    worm
    (Caenorhabditis elegans)
    Secernentea uev-13   -- 66(a)   I(14798233-14798904)   --
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons MMZ36
    MMZ26
    (see all 4)
    ubiquitin-conjugating enzyme E2 variant 1B
    (see all 4)
    52(a)
    47(a)
    (see all 4)
    many ↔ many
    many ↔ many
    (see all 4)
    2(15142677-15144182)
    1(26640565-26642149)
    rice
    (Oryza sativa)
    Liliopsida Os12g06054001 hypothetical protein 56.13(n)
    52.21(a)
      4352739  NM_001073756.1  NP_001067224.1 


    ENSEMBL Gene Tree for UBE2V1 (if available)
    TreeFam Gene Tree for UBE2V1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for UBE2V1 gene
    TMEM1892  UBE2V22  TMEM189-UBE2V12  
    2 SIMAP similar genes for UBE2V1 using alignment to 2 protein entries:     UB2V1_HUMAN (see all proteins):
    TMEM189    UBE2V2

    UBE2V1 for paralogs           About GeneDecksing


    5/12 Pseudogenes.org Pseudogenes for UBE2V1 (see all 12)
    PGOHUM00000234971 PGOHUM00000244081 PGOHUM00000244417 PGOHUM00000247427 PGOHUM00000240968


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/737 NCBI SNPs in UBE2V1 are shown (see all 737    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 20 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs105675041,2
    C--45446232(+) CACAC-/TTTT  
            
    TTTTT
    30 -- ut31 nc-transcript-variant1Minor allele frequency- TTTT:0.50NA 2
    rs26645321,2
    C--45446334(+) CCTTAG/AAACTA 15 -- ut31 nc-transcript-variant2Minor allele frequency- A:0.00NA 4
    rs713394751,2
    C,F--45446436(+) AAATT-/AAAAAA 15 -- ut31 nc-transcript-variant2Minor allele frequency- A:0.50NA CSA 4
    rs736117511,2
    --45446563(+) AAGCCA/CACCAA 15 -- ut31 nc-transcript-variant0--------
    rs27331,2
    F--45446625(+) TCTTGG/AGAAGC 15 -- ut31 nc-transcript-variant1Minor allele frequency- A:0.08MN 184
    rs736117521,2
    --45446868(+) GACTCC/TGAGAG 15 -- ut31 nc-transcript-variant0--------
    rs736117531,2
    --45447074(+) TGATGG/TCTTCT 15 -- ut31 nc-transcript-variant0--------
    rs591248991,2
    C--45447076(+) ATGGCC/TTCTGG 15 -- ut31 nc-transcript-variant1Minor allele frequency- T:0.50WA 2
    rs736117541,2
    --45447097(+) GAAGTC/GTCATG 15 -- ut31 nc-transcript-variant0--------
    rs1140977931,2
    C,F--45447116(+) TGGGTG/AGTGAC 15 -- ut31 nc-transcript-variant1Minor allele frequency- A:0.02WA 118

    HapMap Linkage Disequilibrium report for UBE2V1 (48697661 - 48732496 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for UBE2V1
         1 CNV: 5140

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    UBE2V1 for disorders           About GeneDecksing

    OMIM gene information: 602995    OMIM disorders: --

    9 diseases for UBE2V1:    About MalaCards
    colon adenocarcinoma    conjunctivitis    pancreatic cancer    adenocarcinoma
    prostate cancer    pancreatitis    prostatitis    thyroiditis
    malaria

    1 Novoseek disease relationship for UBE2V1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tumors 12.1 3 10329586 (1), 9705497 (1)


    Export disorders for UBE2V1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for UBE2V1 gene, integrated from 9 sources (see all 62):
    (articles sorted by number of sources associating them with UBE2V1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Role of UEV-1, an inactive variant of the E2 ubiquitin-conjugating enzymes, in in vitro differentiation and cell cycle behavior of HT-29- M6 intestinal mucosecretory cells. (PubMed id 9418904)1, 2, 3 Sancho E.... Thomson T.M. (1998)
    2. CROC-1 encodes a protein which mediates transcriptional activation of the human FOS promoter. (PubMed id 9305758)1, 2, 3 Rothofsky M.L. and Lin S.L. (1997)
    3. The products of the yeast MMS2 and two human homologs (hMMS2 and CROC-1) define a structurally and functionally conserved Ubc-like protein family. (PubMed id 9705497)1, 2, 9 Xiao W.... Wei Y.-F. (1998)
    4. Fusion of the human gene for the polyubiquitination coeffector UEV1 with Kua, a newly identified gene. (PubMed id 11076860)1, 2, 9 Thomson T.M.... Guigo R. (2000)
    5. Activation of the IkappaB kinase complex by TRAF6 requires a dimeric ubiquitin-conjugating enzyme complex and a unique polyubiquitin chain. (PubMed id 11057907)1, 2, 9 Deng L.... Chen Z.J. (2000)
    6. TRIM5 is an innate immune sensor for the retrovirus c apsid lattice. (PubMed id 21512573)1, 2 Pertel T....Luban J. (2011)
    7. Chaperoned ubiquitylation--crystal structures of the CHIP U box E3 ubiquitin ligase and a CHIP-Ubc13-Uev1a complex. (PubMed id 16307917)1, 2 Zhang M....Pearl L.H. (2005)
    8. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    9. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    10. The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052)1, 2 Deloukas P....Rogers J. (2001)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 7335 HGNC: 12494 AceView: Kua-UEV Ensembl:ENSG00000244687 euGenes: HUgn7335
    ECgene: UBE2V1 H-InvDB: UBE2V1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for UBE2V1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for UBE2V1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for UBE2V1 gene:
    Search GeneIP for patents involving UBE2V1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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