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Aliases for UBE2Q1-AS1 Gene

Subcategory (RNA class) for UBE2Q1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBE2Q1-AS1 Gene

  • UBE2Q1 Antisense RNA 1 2 3 5
  • UBE2Q1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBE2Q1-AS1 Gene

Summaries for UBE2Q1-AS1 Gene

GeneCards Summary for UBE2Q1-AS1 Gene

UBE2Q1-AS1 (UBE2Q1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for UBE2Q1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBE2Q1-AS1 Gene

Genomics for UBE2Q1-AS1 Gene

GeneHancer (GH) Regulatory Elements for UBE2Q1-AS1 Gene

Promoters and enhancers for UBE2Q1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I154553 Enhancer 0.4 ENCODE 550.8 +0.0 27 0.6 LCORL NFIC NFIB UBE2Q1-AS1 IL6R SHE GBA UBE2Q1
GH01I154606 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.7 +54.9 54856 4.1 HDGF ARNT ARID4B NEUROD1 SIN3A FEZF1 YBX1 ZNF2 IRF4 YY1 ADAR CLK2 CHTOP ILF2 ASH1L-AS1 ENSG00000271267 CHRNB2 RUSC1-AS1 CRTC2 UBAP2L
GH01I154404 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.4 -146.2 -146227 5.8 HDGF FOXA2 SMAD1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 LOC101928101 IL6R IL6R-AS1 ATP8B2 RNU7-57P UBE2Q1-AS1 UBE2Q1 SHE TDRD10 SNORA58B
GH01I154950 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 9.3 +401.1 401119 8.7 PKNOX1 ATF1 FOXA2 ARID4B SIN3A YY1 GLIS2 ZNF143 ATF7 FOS PBXIP1 ZBTB7B SHC1 FLAD1 CHRNB2 UBE2Q1 UBE2Q1-AS1 ENSG00000268154 PIR58601 PYGO2
GH01I154384 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -167.4 -167434 2.5 HDGF ATF1 FOXA2 SMAD1 ARID4B ZNF48 NCOA2 TCF12 POLR2B GATA2 ATP8B2 IL6R-AS1 RNU7-57P UBE2Q1-AS1 UBE2Q1 SHE TDRD10 C1orf189 SNAPIN UBAP2L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around UBE2Q1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for UBE2Q1-AS1 Gene

Genomic Locations for UBE2Q1-AS1 Gene
chr1:154,553,609-154,555,028
(GRCh38/hg38)
Size:
1,420 bases
Orientation:
Plus strand
chr1:154,526,085-154,527,493
(GRCh37/hg19)

Genomic View for UBE2Q1-AS1 Gene

Genes around UBE2Q1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBE2Q1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBE2Q1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2Q1-AS1 Gene

Proteins for UBE2Q1-AS1 Gene

Post-translational modifications for UBE2Q1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBE2Q1-AS1 Gene

Domains & Families for UBE2Q1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBE2Q1-AS1 Gene

Function for UBE2Q1-AS1 Gene

Phenotypes From GWAS Catalog for UBE2Q1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBE2Q1-AS1 Gene

Localization for UBE2Q1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBE2Q1-AS1 Gene

Pathways & Interactions for UBE2Q1-AS1 Gene

SuperPathways for UBE2Q1-AS1 Gene

No Data Available

Interacting Proteins for UBE2Q1-AS1 Gene

Gene Ontology (GO) - Biological Process for UBE2Q1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBE2Q1-AS1 Gene

Drugs & Compounds for UBE2Q1-AS1 Gene

No Compound Related Data Available

Transcripts for UBE2Q1-AS1 Gene

mRNA/cDNA for UBE2Q1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2Q1-AS1 Gene

No ASD Table

Relevant External Links for UBE2Q1-AS1 Gene

GeneLoc Exon Structure for
UBE2Q1-AS1
ECgene alternative splicing isoforms for
UBE2Q1-AS1

Expression for UBE2Q1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBE2Q1-AS1 Gene

genes like me logo Genes that share expression patterns with UBE2Q1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBE2Q1-AS1 Gene

Orthologs for UBE2Q1-AS1 Gene

Evolution for UBE2Q1-AS1 Gene

ENSEMBL:
Gene Tree for UBE2Q1-AS1 (if available)
TreeFam:
Gene Tree for UBE2Q1-AS1 (if available)

No data available for Orthologs for UBE2Q1-AS1 Gene

Paralogs for UBE2Q1-AS1 Gene

No data available for Paralogs for UBE2Q1-AS1 Gene

Variants for UBE2Q1-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBE2Q1-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000221447 -- 154,554,348(+) A/G intron_variant
rs1000608682 -- 154,552,843(+) A/G upstream_transcript_variant
rs1000724698 -- 154,554,978(+) C/T non_coding_transcript_variant
rs1001460027 -- 154,552,538(+) C/T upstream_transcript_variant
rs1003235905 -- 154,554,440(+) T/A intron_variant

Additional Variant Information for UBE2Q1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBE2Q1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBE2Q1-AS1 Gene

Disorders for UBE2Q1-AS1 Gene

Additional Disease Information for UBE2Q1-AS1

No disorders were found for UBE2Q1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBE2Q1-AS1 Gene

Publications for UBE2Q1-AS1 Gene

No publications were found for UBE2Q1-AS1 Gene.

Products for UBE2Q1-AS1 Gene

Sources for UBE2Q1-AS1 Gene

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