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Aliases for UBE2H Gene

Aliases for UBE2H Gene

  • Ubiquitin Conjugating Enzyme E2 H 2 3 5
  • Ubiquitin-Conjugating Enzyme E2H (UBC8 Homolog, Yeast) 2 3
  • (E3-Independent) E2 Ubiquitin-Conjugating Enzyme H 3 4
  • Ubiquitin-Conjugating Enzyme E2-20K 3 4
  • E2 Ubiquitin-Conjugating Enzyme H 3 4
  • Ubiquitin Carrier Protein H 3 4
  • Ubiquitin-Protein Ligase H 3 4
  • UBCH2 3 4
  • Ubiquitin-Conjugating Enzyme E2H (Homologous To Yeast UBC8) 3
  • GID Complex Subunit 3, UBC8 Homolog (S. Cerevisiae) 2
  • GID Complex Subunit 3, UBC8 Homolog 3
  • Ubiquitin-Conjugating Enzyme E2 H 3
  • Ubiquitin Conjugating Enzyme E2H 3
  • EC 6.3.2.19 56
  • EC 2.3.2.23 4
  • EC 2.3.2.24 4
  • E2-20K 3
  • GID3 3
  • UBC8 3
  • UBCH 3

External Ids for UBE2H Gene

Previous GeneCards Identifiers for UBE2H Gene

  • GC07M127950
  • GC07M129009
  • GC07M129026
  • GC07M129064
  • GC07M129257
  • GC07M129470
  • GC07M123834

Summaries for UBE2H Gene

Entrez Gene Summary for UBE2H Gene

  • The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, and ubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. The encoded protein sequence is 100% identical to the mouse homolog and 98% identical to the frog and zebrafish homologs. Three alternatively spliced transcript variants have been found for this gene and they encode distinct isoforms. [provided by RefSeq, Feb 2011]

GeneCards Summary for UBE2H Gene

UBE2H (Ubiquitin Conjugating Enzyme E2 H) is a Protein Coding gene. Among its related pathways are Metabolism of proteins and Innate Immune System. Gene Ontology (GO) annotations related to this gene include ligase activity and ubiquitin protein ligase binding.

UniProtKB/Swiss-Prot for UBE2H Gene

  • Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes Lys-11- and Lys-48-linked polyubiquitination. Capable, in vitro, to ubiquitinate histone H2A.

Gene Wiki entry for UBE2H Gene

Additional gene information for UBE2H Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBE2H Gene

Genomics for UBE2H Gene

GeneHancer (GH) Regulatory Elements for UBE2H Gene

Promoters and enhancers for UBE2H Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I129947 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 564.5 +2.5 2475 6.2 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 UBE2H NRF1 ENSG00000270953 ENSG00000244036 GC07M129832
GH07I129851 Enhancer 1.3 Ensembl ENCODE dbSUPER 25 +98.6 98649 5.4 FOXA2 BRCA1 RAD21 RFX5 YY1 TCF12 RCOR1 FOS RXRA CEBPB UBE2H ENSG00000199516 ENSG00000243230 AHCYL2 GC07M129832 GC07P129828
GH07I129874 Enhancer 1.3 Ensembl ENCODE dbSUPER 24.6 +77.3 77296 2 HDGF ATF1 ARNT YBX1 NCOA2 ZNF766 ARID2 ATF7 KDM4B CAVIN1 UBE2H TNPO3 NRF1 ENSG00000244036 ENSG00000199516 AHCYL2 ENSG00000243230 GC07M129832 GC07P129828
GH07I129859 Enhancer 1.2 Ensembl ENCODE dbSUPER 24.9 +92.8 92791 2.3 TEAD4 TAL1 ZBTB40 TCF12 CTBP1 POLR3A NCOR1 EGR1 ADNP NFATC1 UBE2H ENSG00000199516 KLHDC10 GC07M129832 GC07P129828
GH07I129862 Enhancer 1.2 Ensembl ENCODE dbSUPER 24.8 +88.4 88428 3.5 ARNT NFRKB ZBTB40 ZNF766 ATF7 KDM4B SMAD5 CEBPB ZEB2 ZNF592 UBE2H ENSG00000244036 ENSG00000199516 ENSG00000273329 GC07M129832 GC07P129828
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around UBE2H on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the UBE2H gene promoter:

Genomic Locations for UBE2H Gene

Genomic Locations for UBE2H Gene
chr7:129,830,732-129,952,960
(GRCh38/hg38)
Size:
122,229 bases
Orientation:
Minus strand
chr7:129,470,572-129,592,800
(GRCh37/hg19)

Genomic View for UBE2H Gene

Genes around UBE2H on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBE2H Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBE2H Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2H Gene

Proteins for UBE2H Gene

  • Protein details for UBE2H Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P62256-UBE2H_HUMAN
    Recommended name:
    Ubiquitin-conjugating enzyme E2 H
    Protein Accession:
    P62256
    Secondary Accessions:
    • A4D1L6
    • C9JY93
    • P37286
    • Q7Z6F4

    Protein attributes for UBE2H Gene

    Size:
    183 amino acids
    Molecular mass:
    20655 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for UBE2H Gene

    Alternative splice isoforms for UBE2H Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for UBE2H Gene

Selected DME Specific Peptides for UBE2H Gene

P62256:
  • VCLDVINQTW
  • KSPSIGF

Post-translational modifications for UBE2H Gene

  • Autoubiquitinated in vitro in the presence of NEDD4L.
  • Ubiquitination at isoforms=260, isoforms=64, and posLast=147147

Other Protein References for UBE2H Gene

Domains & Families for UBE2H Gene

Gene Families for UBE2H Gene

HGNC:
Human Protein Atlas (HPA):
  • Enzymes
  • Predicted intracellular proteins

Suggested Antigen Peptide Sequences for UBE2H Gene

Graphical View of Domain Structure for InterPro Entry

P62256

UniProtKB/Swiss-Prot:

UBE2H_HUMAN :
  • Belongs to the ubiquitin-conjugating enzyme family.
Family:
  • Belongs to the ubiquitin-conjugating enzyme family.
genes like me logo Genes that share domains with UBE2H: view

Function for UBE2H Gene

Molecular function for UBE2H Gene

GENATLAS Biochemistry:
ubiquitin conjugating enzyme H2A,homolog to yeast UBC8
UniProtKB/Swiss-Prot CatalyticActivity:
S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine + [E2 ubiquitin-conjugating enzyme]-L-cysteine = [E1 ubiquitin-activating enzyme]-L-cysteine + S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine.
UniProtKB/Swiss-Prot CatalyticActivity:
S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E1 ubiquitin-activating enzyme]-L-cysteine + N(6)-monoubiquitinyl-[acceptor protein]-L-lysine.
UniProtKB/Swiss-Prot Function:
Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes Lys-11- and Lys-48-linked polyubiquitination. Capable, in vitro, to ubiquitinate histone H2A.

Enzyme Numbers (IUBMB) for UBE2H Gene

Phenotypes From GWAS Catalog for UBE2H Gene

Gene Ontology (GO) - Molecular Function for UBE2H Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004842 ubiquitin-protein transferase activity TAS,IDA 20061386
GO:0005515 protein binding IPI 20028976
GO:0005524 ATP binding IEA --
GO:0016740 transferase activity IEA --
GO:0031625 ubiquitin protein ligase binding IBA --
genes like me logo Genes that share ontologies with UBE2H: view
genes like me logo Genes that share phenotypes with UBE2H: view

Animal Models for UBE2H Gene

MGI Knock Outs for UBE2H:

miRNA for UBE2H Gene

miRTarBase miRNAs that target UBE2H

Clone Products

  • Addgene plasmids for UBE2H

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for UBE2H Gene

Localization for UBE2H Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for UBE2H gene
Compartment Confidence
cytosol 5
mitochondrion 2
nucleus 2

Subcellular locations from the

Human Protein Atlas (HPA)

Gene Ontology (GO) - Cellular Components for UBE2H Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
GO:0005829 cytosol TAS --
genes like me logo Genes that share ontologies with UBE2H: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for UBE2H Gene

Pathways & Interactions for UBE2H Gene

genes like me logo Genes that share pathways with UBE2H: view

UniProtKB/Swiss-Prot P62256-UBE2H_HUMAN

  • Pathway: Protein modification; protein ubiquitination.

Gene Ontology (GO) - Biological Process for UBE2H Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006511 ubiquitin-dependent protein catabolic process TAS 8132613
GO:0016567 protein ubiquitination TAS --
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA --
GO:0070936 protein K48-linked ubiquitination IDA 20061386
GO:0070979 protein K11-linked ubiquitination IDA 20061386
genes like me logo Genes that share ontologies with UBE2H: view

No data available for SIGNOR curated interactions for UBE2H Gene

Drugs & Compounds for UBE2H Gene

(3) Drugs for UBE2H Gene - From: HMDB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Phosphoric acid Approved Pharma 0
Adenosine monophosphate Approved, Investigational Nutra 0
ATP Investigational Nutra Agonist 0

(1) Additional Compounds for UBE2H Gene - From: HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
pyrophosphate
  • (4-)Diphosphoric acid ion
  • (P2O74-)Diphosphate
  • Diphosphate
  • Diphosphoric acid
  • PPi
14000-31-8
genes like me logo Genes that share compounds with UBE2H: view

Transcripts for UBE2H Gene

Unigene Clusters for UBE2H Gene

Ubiquitin-conjugating enzyme E2H:
Representative Sequences:

Clone Products

  • Addgene plasmids for UBE2H

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2H Gene

No ASD Table

Relevant External Links for UBE2H Gene

GeneLoc Exon Structure for
UBE2H
ECgene alternative splicing isoforms for
UBE2H

Expression for UBE2H Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBE2H Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for UBE2H Gene



Protein tissue co-expression partners for UBE2H Gene

NURSA nuclear receptor signaling pathways regulating expression of UBE2H Gene:

UBE2H

SOURCE GeneReport for Unigene cluster for UBE2H Gene:

Hs.643548

Evidence on tissue expression from TISSUES for UBE2H Gene

  • Nervous system(4.2)
  • Lung(3.9)
  • Skin(3.4)
  • Intestine(2.7)
  • Muscle(2.1)
genes like me logo Genes that share expression patterns with UBE2H: view

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBE2H Gene

Orthologs for UBE2H Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for UBE2H Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia UBE2H 34
  • 100 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia UBE2H 33 34
  • 99.82 (n)
mouse
(Mus musculus)
Mammalia Gm2058 34
  • 99 (a)
OneToMany
Ube2h 33 16 34
  • 93.81 (n)
dog
(Canis familiaris)
Mammalia UBE2H 33 34
  • 96.72 (n)
cow
(Bos Taurus)
Mammalia UBE2H 33 34
  • 95.08 (n)
rat
(Rattus norvegicus)
Mammalia Ube2h 33
  • 93.62 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia UBE2H 34
  • 91 (a)
OneToOne
chicken
(Gallus gallus)
Aves UBE2H 33 34
  • 89.25 (n)
lizard
(Anolis carolinensis)
Reptilia UBE2H 34
  • 88 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ube2h 33
  • 87.07 (n)
Str.5927 33
African clawed frog
(Xenopus laevis)
Amphibia ube2h-prov 33
zebrafish
(Danio rerio)
Actinopterygii ube2h 33 34
  • 82.33 (n)
wufc07a05 33
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.1397 33
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP001068 33
  • 70.15 (n)
fruit fly
(Drosophila melanogaster)
Insecta Ubc-E2H 35 33 34
  • 65.76 (n)
CG14739 35
  • 43 (a)
worm
(Caenorhabditis elegans)
Secernentea ubc-8 35 33 34
  • 62.58 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes UBC8 33 34 36
  • 58.99 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0A11198g 33
  • 58.28 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AEL045W 33
  • 55.7 (n)
thale cress
(Arabidopsis thaliana)
eudicotyledons UBC4 33
  • 63.5 (n)
soybean
(Glycine max)
eudicotyledons Gma.18138 33
Alicante grape
(Vitis vinifera)
eudicotyledons Vvi.7729 33
rice
(Oryza sativa)
Liliopsida Os10g0447100 33
  • 61.15 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU10046 33
  • 64.79 (n)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes ubc8 33
  • 60.18 (n)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.3173 33
Species where no ortholog for UBE2H was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for UBE2H Gene

ENSEMBL:
Gene Tree for UBE2H (if available)
TreeFam:
Gene Tree for UBE2H (if available)

Paralogs for UBE2H Gene

Pseudogenes.org Pseudogenes for UBE2H Gene

genes like me logo Genes that share paralogs with UBE2H: view

No data available for Paralogs for UBE2H Gene

Variants for UBE2H Gene

Sequence variations from dbSNP and Humsavar for UBE2H Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000002044 -- 129,928,517(-) T/C intron_variant
rs1000059125 -- 129,872,399(-) C/A intron_variant
rs1000095198 -- 129,928,281(-) AAAAAAA/AAAAAA/AAAAAAAA intron_variant
rs1000116794 -- 129,845,002(-) C/T intron_variant
rs1000124158 -- 129,887,303(-) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for UBE2H Gene

Variant ID Type Subtype PubMed ID
esv2735150 CNV deletion 23290073
esv3572138 CNV loss 25503493
esv3615007 CNV loss 21293372
nsv366414 CNV deletion 16902084
nsv510968 OTHER complex 20534489
nsv831129 CNV loss 17160897
nsv949947 CNV duplication 24416366

Variation tolerance for UBE2H Gene

Residual Variation Intolerance Score: 44.4% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for UBE2H Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBE2H

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for UBE2H Gene

Disorders for UBE2H Gene

Additional Disease Information for UBE2H

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for UBE2H Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBE2H Gene

Publications for UBE2H Gene

  1. A human ubiquitin-conjugating enzyme homologous to yeast UBC8. (PMID: 8132613) Kaiser P … Schneider R (The Journal of biological chemistry 1994) 2 3 4 22 58
  2. The E2 ubiquitin-conjugating enzymes direct polyubiquitination to preferred lysines. (PMID: 20061386) David Y … Navon A (The Journal of biological chemistry 2010) 3 4 58
  3. A common variant in DRD3 receptor is associated with autism spectrum disorder. (PMID: 19058789) de Krom M … van Ree JM (Biological psychiatry 2009) 3 44 58
  4. Association study of the ubiquitin conjugating enzyme gene UBE2H in sporadic ALS. (PMID: 19922136) Martin I … French ALS Study Group (Amyotrophic lateral sclerosis : official publication of the World Federation of Neurology Research Group on Motor Neuron Diseases 2009) 3 44 58
  5. E3-independent monoubiquitination of ubiquitin-binding proteins. (PMID: 17588522) Hoeller D … Dikic I (Molecular cell 2007) 3 4 58

Products for UBE2H Gene

Sources for UBE2H Gene

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