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Aliases & Descriptions for UBE2G2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase , and/or 9 Nature :405,311-319 and CroW21)About This Section
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Aliases EC 6.3.2.19 3 UBC7 1 , 2 , 5
Descriptions Ubiquitin carrier protein G2 2 , 3 Ubiquitin-protein ligase G2 2 , 3 human ubiquitin conjugating enzyme G2 9 ubiquitin conjugating enzyme 7 2 ubiquitin conjugating enzyme G2 2 ubiquitin-conjugating enzyme E2G 2 2 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) 2 ubiquitin-conjugating enzyme E2G 2 (homologous to yeast UBC7) 1 , 2
Search outside databases for aliases for UBE2G2 genePrevious GC identifers: GC21M042698 GC21M045045
Summaries for UBE2G2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for UBE2G2 : The modification of proteins with ubiquitin is an important cellular mechanism for targetingabnormal or short-lived proteins for degradation. Ubiquitination involves at least three classesof enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, andubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugatingenzyme family. The encoded protein shares 100% sequence identity with the mouse counterpart. Thisgene is ubiquitously expressed, with high expression seen in adult muscle. Two alternativelyspliced transcript variants encoding distinct isoforms have been found for this gene. [provided byRefSeq] UniProtKB/Swiss-Prot: UB2G2_HUMAN, P60604 Function : Catalyzes the covalent attachment of ubiquitin to other proteins. Involved in endoplasmicreticulum-associated degradation (ERAD)
Gene Wiki entry for UBE2G2
Genomic Location for UBE2G2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences , Whole Chromsome Sequence According to
Nature (Cited Here with Permission) :405,311-319 and CroW21)About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 21q22.3 Ensembl cytogenetic band: 21q22.3 HGNC cytogenetic band: 21q22.3 Nature(405: 311-319) cytogenetic band: 21q22.3 UBE2G2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
GC21M045013:
GeneLoc
Nature :405,311-319
Start:
45,013,383 bp from pter
31,698,366 bp from centromere
End:
45,046,166 bp from pter
31,731,118 bp from centromere
Size:
32,784 bases
32,753 bases
Orientation:
minus strand
minus strand
RefSeq DNA sequence: NC_000021.7 NT_011515.11 Whole chromosome sequencing:
cDNA sequence:
AF032456 genomic clones:
P225L15
Proteins for UBE2G2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
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Sigma-Aldrich ,
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Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
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Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: UB2G2_HUMAN, P60604 (See
protein sequence )Recommended Name: Ubiquitin-conjugating enzyme E2 G2 Size : 165 amino acids; 18566 Da
PDB structures from and Proteopedia : 2CYX (3D)
 
Secondary accessions : P56554
REFSEQ proteins (2 alternative transcripts):
NP_003334.2 NP_872630.1 ENSEMBL proteins: ENSP00000381001 ENSP00000338348 ENSP00000331384 ENSP00000381000 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): UBE2G2 1 Gene Ontology (GO) cellular component term (links to tree view) :
About this table Antibodies for UBE2G2: Assays for UBE2G2:
Protein
Domains/ Families for UBE2G2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P60604 ProtoNet protein and cluster: P60604
1 Blocks protein family : IPB000608 Ubiquitin-conjugating enzymes UniProtKB/Swiss-Prot: UB2G2_HUMAN, P60604 Similarity : Belongs to the ubiquitin-conjugating enzyme family
Gene Function for UBE2G2
(According to MGI Jun 06 2009, UniProtKB ,
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Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_003343 Applied Biosystems Silencer ® siRNAs for UBE2G2 Sigma-Aldrich siRNA and siRNA Panels for UBE2G2 Sigma-Aldrich shRNA Panels and shRNA for UBE2G2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_003343                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_003343                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_003343  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003343 UniProtKB/Swiss-Prot: UB2G2_HUMAN, P60604 Function : Catalyzes the covalent attachment of ubiquitin to other proteins. Involved in endoplasmicreticulum-associated degradation (ERAD) Catalytic activity : ATP + ubiquitin + protein lysine = AMP + diphosphate + proteinN-ubiquityllysine Enzyme Number (IUBMB): EC 6.3.2.19
Genatlas biochemistry entry for UBE2G2 :ubiquitin conjugating enzyme,homolog to yeast UBC7,with two transcript,ubiquitously expressed 3 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for UBE2G2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for UBE2G2 (Your Favorite Gene powered by Ingenuity) UniProtKB/Swiss-Prot: UB2G2_HUMAN, P60604 Pathway : Protein modification; protein ubiquitination
5/7 Interacting proteins for UBE2G2 (ENSP00000338348 3 P60604 1 ) via UniProtKB, MINT, and/or STRING (see all 7
)About this table 3 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006511 ubiquitin-dependent protein catabolic process
TAS 9693041 GO:0043687 post-translational protein modification
IEA -- GO:0051246 regulation of protein metabolic process
IEA --
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Drugs & Compounds for UBE2G2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
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Novoseek and Drugs according to
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Transcripts for UBE2G2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
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ESTs according to GeneTide ,
exon structure from GeneLoc ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_003343 Sigma-Aldrich siRNA and siRNA Panels for UBE2G2 Sigma-Aldrich shRNA Panels and shRNA for UBE2G2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_003343 NM_182688
REFSEQ mRNAs for UBE2G2 gene (2 alternative transcripts): NM_003343.4 NM_182688.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003343 NM_182688
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_003343                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_003343                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_003343  
Additional cDNA sequence: BC017241.2
19 DOTS entries : DT.121132559 DT.454521 DT.92449943 DT.100840051 DT.40116400 DT.424690 DT.438750 DT.100030109 DT.121132538 DT.95226324 DT.100778705 DT.100778709 DT.121132556 DT.121132557 DT.92449941 DT.95226297 DT.100695636 DT.100778710 DT.92449945
24/379 AceView cDNA sequences (see all 379
):AA700565 BM312498 AA659503 CA436766 CK822080 CD367486 BP341530 BU191548 CK430987 AW731802 AA311312 AA443634 BQ218385 CA748881 AW188157 BC011569 BU630302 BM480344 BU782522 AW068356 AA449337 BU184932 CR593095 BM353079
highest scoring ESTs for UBE2G2 :AA100375 AF032456 AI215057 AL038702 AL530398 AL598640 AL603453 AU098906 AW672742 BC001738
Unigene Clusters for UBE2G2: Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) Hs.529420 [show with all ESTs ] , Hs.701398 [show with all ESTs ] Unigene Representative Sequences: AK122700 , BC017241 GeneLoc Exon Structure 5/8 Alternative Splicing Database (ASD) splice patterns (SP) for UBE2G2 (see all 8
) ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c · 6d ^ 7a · 7b ^ 8a · 8b · 8c SP1 :             -   -   -   -   -   -           SP2 :             -   -       -   -           SP3 :             -                     SP4 :     -   -   -     -   -   -   -   -   -           SP5 :                                
About this scheme ECgene alternative splicing isoforms for UBE2G2 4 Ensembl transcripts including schematic representations : ENST00000397904
ENST00000345496
ENST00000330942
ENST00000397903
Expression for UBE2G2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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UBE2G2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for UBE2G2 1 / 2 / 3
9 probe-sets matching UBE2G2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene clusters: Hs.529420 Hs.701398 Expression variation in blood from EXPOLDB for UBE2G2
Orthologs for UBE2G2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for UBE2G2 gene from 5/20 species (see all 20
)
About this table Species with no ortholog for UBE2G2 ENSEMBL Gene Tree for UBE2G2 Paralogs for UBE2G2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for UBE2G2 gene UBE2G1 2
SNPs/Variants for UBE2G2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for UBE2G2 (up to first 250kb)
Disorders & Mutations for UBE2G2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
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OMIM: 603124 1 PharmGKB disease relationship for UBE2G2 gene About this table
Medical News for UBE2G2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for UBE2G2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/27 PubMed articles for UBE2G2 gene (see all 27
): Identification, expression, and chromosomal localization of ubiquitin conjugating enzyme 7 (UBE2G2), a human homologue of the Saccharomyces cerevisiae UBC7 gene. (PubMed id 9693041) 1, 2, 3, 4 Katsanis N. and Fisher E.M.C. (1998) Structure of human ubiquitin-conjugating enzyme E2 G2 (UBE2G2/UBC7). (PubMed id 16582478) 1, 3, 4 Arai R.... Yokoyama S. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) The DNA sequence of human chromosome 21. (PubMed id 10830953) 3, 4 Hattori M....Yaspo M.L. (2000) Assignment1 of the ubiquitin conjugating enzyme gene, UBE2G2, to human chromosome band 21q22.3 by in situ hybridization. (PubMed id 9925943) 2, 3 Rose S.A....Robinson P.A. (1998) Ufd1 is a cofactor of gp78 and plays a key role in cholesterol metabolism by regulating the stability of HMG-CoA reductase. (PubMed id 17681147) 3 Cao J....Song B.L. (2007) Large-scale mapping of human protein-protein interactions by mass spectrometry. (PubMed id 17353931) 3 Ewing R.M....Figeys D. (2007) The activity of a human endoplasmic reticulum-associated degradation E3, gp78, requires its Cue domain, RING finger, and an E2-binding site. (PubMed id 16407162) 3 Chen B....Weissman A.M. (2006) Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins. (PubMed id 16780588) 3 Hu Y.H....Janitz M. (2006) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 3 Ota T....Sugano S. (2004)
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Genome Databases showing UBE2G2
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AceView ,
euGenes ,
Ensembl ,
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ECgene ,
and/or
H-InvDB )
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Other Databases showing UBE2G2
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Specialized Databases showing UBE2G2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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