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Aliases for UBE2E2-AS1 Gene

Subcategory (RNA class) for UBE2E2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBE2E2-AS1 Gene

  • UBE2E2 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for UBE2E2-AS1 Gene

Summaries for UBE2E2-AS1 Gene

GeneCards Summary for UBE2E2-AS1 Gene

UBE2E2-AS1 (UBE2E2 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBE2E2-AS1 Gene

Genomics for UBE2E2-AS1 Gene

Regulatory Elements for UBE2E2-AS1 Gene

Enhancers for UBE2E2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G023159 1.3 FANTOM5 Ensembl ENCODE 11.6 +42.9 42921 1.1 FOXA2 JUN ZMYM3 EBF1 RELA ZNF316 ZFHX2 EGR1 EED RELB UBE2E2 UBE2E2-AS1 PIR39843 RPL24P7
GH03G023263 0.4 ENCODE 15.8 -61.4 -61353 1.8 JUND FOS UBE2E2-AS1 UBE2E2 PIR45638
GH03G023162 0.5 ENCODE 11 +40.0 40001 0.2 BHLHE40 EED EBF1 SPI1 UBE2E2 UBE2E2-AS1 PIR39843 RPL24P7
GH03G023164 0.3 FANTOM5 11.5 +38.0 38048 0.0 UBE2E2 UBE2E2-AS1 PIR39843 RPL24P7
GH03G023254 0.5 Ensembl 4.4 -51.8 -51756 0.4 HNF1A BCL6 EBF1 UBE2E2 UBE2E2-AS1 PIR45638
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UBE2E2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UBE2E2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000149675 -655 2201 HDGF FOXA2 ARNT ZNF133 SIN3A ZNF766 GLIS2 ELK1 ZNF143 ZNF263

Genomic Location for UBE2E2-AS1 Gene

Chromosome:
3
Start:
23,195,070 bp from pter
End:
23,203,045 bp from pter
Size:
7,976 bases
Orientation:
Minus strand

Genomic View for UBE2E2-AS1 Gene

Genes around UBE2E2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBE2E2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBE2E2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2E2-AS1 Gene

Proteins for UBE2E2-AS1 Gene

Post-translational modifications for UBE2E2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBE2E2-AS1 Gene

Domains & Families for UBE2E2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBE2E2-AS1 Gene

Function for UBE2E2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBE2E2-AS1 Gene

Localization for UBE2E2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBE2E2-AS1 Gene

Pathways & Interactions for UBE2E2-AS1 Gene

SuperPathways for UBE2E2-AS1 Gene

No Data Available

Interacting Proteins for UBE2E2-AS1 Gene

Gene Ontology (GO) - Biological Process for UBE2E2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBE2E2-AS1 Gene

Transcripts for UBE2E2-AS1 Gene

mRNA/cDNA for UBE2E2-AS1 Gene

(9) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UBE2E2-AS1 Gene

UBE2E2 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2E2-AS1 Gene

No ASD Table

Relevant External Links for UBE2E2-AS1 Gene

GeneLoc Exon Structure for
UBE2E2-AS1
ECgene alternative splicing isoforms for
UBE2E2-AS1

Expression for UBE2E2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBE2E2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UBE2E2-AS1 Gene

This gene is overexpressed in Testis (x42.5).

SOURCE GeneReport for Unigene cluster for UBE2E2-AS1 Gene:

Hs.125904
genes like me logo Genes that share expression patterns with UBE2E2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBE2E2-AS1 Gene

Orthologs for UBE2E2-AS1 Gene

Evolution for UBE2E2-AS1 Gene

ENSEMBL:
Gene Tree for UBE2E2-AS1 (if available)
TreeFam:
Gene Tree for UBE2E2-AS1 (if available)

No data available for Orthologs for UBE2E2-AS1 Gene

Paralogs for UBE2E2-AS1 Gene

No data available for Paralogs for UBE2E2-AS1 Gene

Variants for UBE2E2-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBE2E2-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000253882 -- 23,201,696(+) GAGAT(A/G)ATTAT intron-variant, upstream-variant-2KB
rs1000288875 -- 23,202,020(+) TCAAA(C/T)GAAGT intron-variant, upstream-variant-2KB
rs1000388266 -- 23,195,769(+) GGAAA(G/T)GCATG intron-variant
rs1000656472 -- 23,203,958(+) GCCCG(G/T)AGAAG intron-variant, upstream-variant-2KB
rs1000767083 -- 23,196,913(+) AAACA(A/T)TGAAA intron-variant

Relevant External Links for UBE2E2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBE2E2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBE2E2-AS1 Gene

Disorders for UBE2E2-AS1 Gene

Relevant External Links for UBE2E2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBE2E2-AS1

No disorders were found for UBE2E2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBE2E2-AS1 Gene

Publications for UBE2E2-AS1 Gene

No publications were found for UBE2E2-AS1 Gene.

Products for UBE2E2-AS1 Gene

Sources for UBE2E2-AS1 Gene

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