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Aliases for UBE2E1-AS1 Gene

Subcategory (RNA class) for UBE2E1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBE2E1-AS1 Gene

  • UBE2E1 Antisense RNA 1 2 3 5
  • UBE2E1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBE2E1-AS1 Gene

Previous GeneCards Identifiers for UBE2E1-AS1 Gene

  • GC00U933526

Summaries for UBE2E1-AS1 Gene

GeneCards Summary for UBE2E1-AS1 Gene

UBE2E1-AS1 (UBE2E1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for UBE2E1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBE2E1-AS1 Gene

Genomics for UBE2E1-AS1 Gene

GeneHancer (GH) Regulatory Elements for UBE2E1-AS1 Gene

Promoters and enhancers for UBE2E1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I023805 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -1.9 -1902 6.9 PKNOX1 FOXA2 SMAD1 ARNT SIN3A DMAP1 YBX1 ZNF2 YY1 POLR2B UBE2E1 UBE2E1-AS1 RPL15 NKIRAS1 NR1D2 GC03P023841
GH03I023738 Enhancer 1.4 FANTOM5 Ensembl ENCODE 12 +66.4 66400 3.5 PKNOX1 IRF4 ATF7 FOS RUNX3 KLF13 JUNB REST MEF2D MAFF UBE2E1 UBE2E1-AS1 NR1D2 GC03M023675
GH03I023648 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.7 +156.9 156858 2.8 INSM2 KLF17 RAD21 ZNF335 SCRT2 ATF7 ETV6 FOS RUNX3 ZNF654 UBE2E1 UBE2E1-AS1 ARL4AP4 LOC105376993 GC03P023679
GH03I023829 Enhancer 1 Ensembl ENCODE 12.3 -22.9 -22944 1.1 PKNOX1 BACH1 CHD4 BMI1 BATF IRF4 RELA ZNF121 NFATC1 ATF7 UBE2E1 UBE2E1-AS1 NKIRAS1 NR1D2 RPL15 GC03P023841
GH03I023856 Enhancer 1 Ensembl ENCODE 11.2 -50.4 -50375 2 PKNOX1 ZNF133 EBF1 BMI1 BATF IRF4 ZNF316 NFATC1 ZSCAN5C ZNF143 UBE2E1 UBE2E1-AS1 RPL15 NKIRAS1 NR1D2 GC03M023860 GC03P023854
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around UBE2E1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for UBE2E1-AS1 Gene

Genomic Locations for UBE2E1-AS1 Gene
chr3:23,804,024-23,806,905
(GRCh38/hg38)
Size:
2,882 bases
Orientation:
Minus strand
chr3:23,845,515-23,848,396
(GRCh37/hg19)

Genomic View for UBE2E1-AS1 Gene

Genes around UBE2E1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBE2E1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBE2E1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2E1-AS1 Gene

Proteins for UBE2E1-AS1 Gene

Post-translational modifications for UBE2E1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBE2E1-AS1 Gene

Domains & Families for UBE2E1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBE2E1-AS1 Gene

Function for UBE2E1-AS1 Gene

Phenotypes From GWAS Catalog for UBE2E1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBE2E1-AS1 Gene

Localization for UBE2E1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBE2E1-AS1 Gene

Pathways & Interactions for UBE2E1-AS1 Gene

SuperPathways for UBE2E1-AS1 Gene

No Data Available

Interacting Proteins for UBE2E1-AS1 Gene

Gene Ontology (GO) - Biological Process for UBE2E1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBE2E1-AS1 Gene

Drugs & Compounds for UBE2E1-AS1 Gene

No Compound Related Data Available

Transcripts for UBE2E1-AS1 Gene

mRNA/cDNA for UBE2E1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2E1-AS1 Gene

No ASD Table

Relevant External Links for UBE2E1-AS1 Gene

GeneLoc Exon Structure for
UBE2E1-AS1
ECgene alternative splicing isoforms for
UBE2E1-AS1

Expression for UBE2E1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBE2E1-AS1 Gene

genes like me logo Genes that share expression patterns with UBE2E1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBE2E1-AS1 Gene

Orthologs for UBE2E1-AS1 Gene

Evolution for UBE2E1-AS1 Gene

ENSEMBL:
Gene Tree for UBE2E1-AS1 (if available)
TreeFam:
Gene Tree for UBE2E1-AS1 (if available)

No data available for Orthologs for UBE2E1-AS1 Gene

Paralogs for UBE2E1-AS1 Gene

No data available for Paralogs for UBE2E1-AS1 Gene

Variants for UBE2E1-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBE2E1-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000579206 -- 23,806,097(-) A/ intron_variant
rs1001134818 -- 23,807,160(-) C/G upstream_transcript_variant
rs1001366013 -- 23,806,866(-) C/T non_coding_transcript_variant
rs1001482743 -- 23,806,979(-) G/A upstream_transcript_variant
rs1002316534 -- 23,805,178(-) G/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for UBE2E1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3575556 CNV gain 25503493
nsv1005186 CNV gain 25217958
nsv834637 CNV loss 17160897

Additional Variant Information for UBE2E1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBE2E1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for UBE2E1-AS1 Gene

Disorders for UBE2E1-AS1 Gene

Additional Disease Information for UBE2E1-AS1

No disorders were found for UBE2E1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBE2E1-AS1 Gene

Publications for UBE2E1-AS1 Gene

  1. Brain proteins interacting with the tetramerization region of non-erythroid alpha spectrin. (PMID: 17607528) Oh Y … Fung LW (Cellular & molecular biology letters 2007) 3 58

Products for UBE2E1-AS1 Gene

Sources for UBE2E1-AS1 Gene

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