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Aliases for UBE2E1-AS1 Gene

Subcategory (RNA class) for UBE2E1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for UBE2E1-AS1 Gene

  • UBE2E1 Antisense RNA 1 2 3 5
  • UBE2E1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBE2E1-AS1 Gene

Previous GeneCards Identifiers for UBE2E1-AS1 Gene

  • GC00U933526

Summaries for UBE2E1-AS1 Gene

GeneCards Summary for UBE2E1-AS1 Gene

UBE2E1-AS1 (UBE2E1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBE2E1-AS1 Gene

Genomics for UBE2E1-AS1 Gene

Regulatory Elements for UBE2E1-AS1 Gene

Enhancers for UBE2E1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G023738 1.6 FANTOM5 Ensembl ENCODE 12 +66.4 66400 3.5 PKNOX1 ZNF121 GATA2 FOS JUNB TBX21 MEF2D MAFF SMARCA4 MYNN UBE2E1 UBE2E1-AS1 NR1D2 GC03M023675
GH03G023648 1.4 Ensembl ENCODE dbSUPER 10.7 +156.9 156858 2.8 INSM2 KLF17 RAD21 GATA2 SCRT2 FOS ETV6 CREM ZNF654 USF2 UBE2E1 UBE2E1-AS1 LOC105376993 GC03P023679
GH03G023829 1.1 Ensembl ENCODE 12.3 -22.9 -22944 1.1 PKNOX1 TBL1XR1 BMI1 ZNF121 CBX5 RELB ETV6 IKZF2 CREM ZNF202 UBE2E1 UBE2E1-AS1 NKIRAS1 NR1D2 RPL15 GC03P023841
GH03G023864 1.2 Ensembl ENCODE 11.1 -58.9 -58882 2.1 ATF1 TCF12 ZNF766 GATA2 JUNB TBX21 MEF2D SMARCA4 GLIS1 MYNN RPL15 NKIRAS1 UBE2E1 UBE2E1-AS1 NR1D2 GC03M023860 ARL4AP4
GH03G023876 1 Ensembl ENCODE 12.4 -70.6 -70607 1.6 PKNOX1 SIN3A MAX ZFHX2 EGR1 POLR2A SMC3 RCOR1 PRDM10 CHD2 UBE2E1 UBE2E1-AS1 RPL15 NKIRAS1 NR1D2 ARL4AP4 GC03M023860
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UBE2E1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UBE2E1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000149748 405 2201 FOXA2 ZNF133 SIN3A FEZF1 ZNF2 ZNF48 YY1 GLIS2 ELK1 ZNF263

Genomic Location for UBE2E1-AS1 Gene

Chromosome:
3
Start:
23,804,024 bp from pter
End:
23,806,905 bp from pter
Size:
2,882 bases
Orientation:
Minus strand

Genomic View for UBE2E1-AS1 Gene

Genes around UBE2E1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBE2E1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBE2E1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2E1-AS1 Gene

Proteins for UBE2E1-AS1 Gene

Post-translational modifications for UBE2E1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBE2E1-AS1 Gene

Domains & Families for UBE2E1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBE2E1-AS1 Gene

Function for UBE2E1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBE2E1-AS1 Gene

Localization for UBE2E1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBE2E1-AS1 Gene

Pathways & Interactions for UBE2E1-AS1 Gene

SuperPathways for UBE2E1-AS1 Gene

No Data Available

Interacting Proteins for UBE2E1-AS1 Gene

Gene Ontology (GO) - Biological Process for UBE2E1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBE2E1-AS1 Gene

Drugs & Compounds for UBE2E1-AS1 Gene

No Compound Related Data Available

Transcripts for UBE2E1-AS1 Gene

mRNA/cDNA for UBE2E1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2E1-AS1 Gene

No ASD Table

Relevant External Links for UBE2E1-AS1 Gene

GeneLoc Exon Structure for
UBE2E1-AS1
ECgene alternative splicing isoforms for
UBE2E1-AS1

Expression for UBE2E1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBE2E1-AS1 Gene

genes like me logo Genes that share expression patterns with UBE2E1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBE2E1-AS1 Gene

Orthologs for UBE2E1-AS1 Gene

Evolution for UBE2E1-AS1 Gene

ENSEMBL:
Gene Tree for UBE2E1-AS1 (if available)
TreeFam:
Gene Tree for UBE2E1-AS1 (if available)

No data available for Orthologs for UBE2E1-AS1 Gene

Paralogs for UBE2E1-AS1 Gene

No data available for Paralogs for UBE2E1-AS1 Gene

Variants for UBE2E1-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBE2E1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000579206 -- 23,806,097(+) CGGGG(-/A)TCCCC intron-variant
rs1001134818 -- 23,807,160(+) GCCCT(C/G)CTGAC intron-variant, upstream-variant-2KB
rs1001366013 -- 23,806,866(+) ACAGC(C/T)CCGAG intron-variant, nc-transcript-variant
rs1001482743 -- 23,806,979(+) GGAGA(A/G)CCCCG intron-variant, upstream-variant-2KB
rs1002316534 -- 23,805,178(+) TCCCA(C/G)TGATG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for UBE2E1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3575556 CNV gain 25503493
nsv1005186 CNV gain 25217958
nsv834637 CNV loss 17160897

Relevant External Links for UBE2E1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBE2E1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for UBE2E1-AS1 Gene

Disorders for UBE2E1-AS1 Gene

Relevant External Links for UBE2E1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBE2E1-AS1

No disorders were found for UBE2E1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBE2E1-AS1 Gene

Publications for UBE2E1-AS1 Gene

  1. Brain proteins interacting with the tetramerization region of non-erythroid alpha spectrin. (PMID: 17607528) Oh Y. … Fung L.W. (Cell. Mol. Biol. Lett. 2007) 3 64

Products for UBE2E1-AS1 Gene

Sources for UBE2E1-AS1 Gene

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