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Aliases for UBE2C Gene

Aliases for UBE2C Gene

  • Ubiquitin-Conjugating Enzyme E2C 2 3
  • UBCH10 3 4 6
  • Ubiquitin-Protein Ligase C 3 4
  • EC 6.3.2.19 4 63
  • Mitotic-Specific Ubiquitin-Conjugating Enzyme 3
  • Cyclin-Selective Ubiquitin Carrier Protein 3
  • Ubiquitin-Conjugating Enzyme E2 C 3
  • Ubiquitin Carrier Protein C 4
  • DJ447F3.2 3

External Ids for UBE2C Gene

Previous GeneCards Identifiers for UBE2C Gene

  • GC20P044169
  • GC20P045079
  • GC20P045126
  • GC20P043874
  • GC20P044442
  • GC20P041183

Summaries for UBE2C Gene

Entrez Gene Summary for UBE2C Gene

  • The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, ubiquitin-conjugating enzymes, and ubiquitin-protein ligases. This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. The encoded protein is required for the destruction of mitotic cyclins and for cell cycle progression, and may be involved in cancer progression. Multiple transcript variants encoding different isoforms have been found for this gene. Pseudogenes of this gene have been defined on chromosomes 4, 14, 15, 18, and 19. [provided by RefSeq, Aug 2013]

GeneCards Summary for UBE2C Gene

UBE2C (Ubiquitin-Conjugating Enzyme E2C) is a Protein Coding gene. Among its related pathways are TGF-Beta Pathway and Class I MHC mediated antigen processing and presentation. GO annotations related to this gene include ubiquitin-protein transferase activity. An important paralog of this gene is UBE2W.

UniProtKB/Swiss-Prot for UBE2C Gene

  • Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes Lys-11- and Lys-48-linked polyubiquitination. Acts as an essential factor of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated ubiquitin ligase that controls progression through mitosis. Acts by initiating Lys-11-linked polyubiquitin chains on APC/C substrates, leading to the degradation of APC/C substrates by the proteasome and promoting mitotic exit.

Gene Wiki entry for UBE2C Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBE2C Gene

Genomics for UBE2C Gene

Regulatory Elements for UBE2C Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for UBE2C Gene

Start:
45,812,576 bp from pter
End:
45,816,957 bp from pter
Size:
4,382 bases
Orientation:
Plus strand

Genomic View for UBE2C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UBE2C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBE2C Gene

Proteins for UBE2C Gene

  • Protein details for UBE2C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O00762-UBE2C_HUMAN
    Recommended name:
    Ubiquitin-conjugating enzyme E2 C
    Protein Accession:
    O00762
    Secondary Accessions:
    • A6NP33
    • E1P5N7
    • G3XAB7

    Protein attributes for UBE2C Gene

    Size:
    179 amino acids
    Molecular mass:
    19652 Da
    Quaternary structure:
    • Component of the APC/C complex

    Three dimensional structures from OCA and Proteopedia for UBE2C Gene

    Alternative splice isoforms for UBE2C Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for UBE2C Gene

Proteomics data for UBE2C Gene at MOPED

Post-translational modifications for UBE2C Gene

  • Autoubiquitinated by the APC/C complex, leading to its degradation by the proteasome. Its degradation plays a central role in APC/C regulation, allowing cyclin-A accumulation before S phase entry. APC/C substrates inhibit the autoubiquitination of UBE2C/UBCH10 but not its E2 function, hence APC/C remaining active until its substrates have been destroyed.
  • Ubiquitination at Lys80 and Lys121
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for UBE2C (UBE2C)

Protein Products

Domains for UBE2C Gene

Gene Families for UBE2C Gene

HGNC:
  • UBE2 :Ubiquitin-conjugating enzymes E2

Protein Domains for UBE2C Gene

Suggested Antigen Peptide Sequences for UBE2C Gene

Graphical View of Domain Structure for InterPro Entry

O00762

UniProtKB/Swiss-Prot:

UBE2C_HUMAN :
  • O00762
Family:
  • Belongs to the ubiquitin-conjugating enzyme family.
genes like me logo Genes that share domains with UBE2C: view

Function for UBE2C Gene

Molecular function for UBE2C Gene

UniProtKB/Swiss-Prot CatalyticActivity: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
UniProtKB/Swiss-Prot Function: Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes Lys-11- and Lys-48-linked polyubiquitination. Acts as an essential factor of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated ubiquitin ligase that controls progression through mitosis. Acts by initiating Lys-11-linked polyubiquitin chains on APC/C substrates, leading to the degradation of APC/C substrates by the proteasome and promoting mitotic exit.

Enzyme Numbers (IUBMB) for UBE2C Gene

Gene Ontology (GO) - Molecular Function for UBE2C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004842 contributes_to ubiquitin-protein transferase activity IDA 18485873
GO:0005515 protein binding IPI 19822757
GO:0005524 ATP binding IEA --
GO:0016874 ligase activity IEA --
GO:0016881 acid-amino acid ligase activity --
genes like me logo Genes that share ontologies with UBE2C: view
genes like me logo Genes that share phenotypes with UBE2C: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for UBE2C

In Situ Assay Products

Flow Cytometry Products

No data available for Animal Models , Transcription Factor Targeting and HOMER Transcription for UBE2C Gene

Localization for UBE2C Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for UBE2C Gene COMPARTMENTS Subcellular localization image for UBE2C gene
Compartment Confidence
nucleus 5
cytosol 4
cytoskeleton 1
endoplasmic reticulum 1
mitochondrion 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for UBE2C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005654 nucleoplasm TAS --
GO:0005680 anaphase-promoting complex IDA 18485873
GO:0005737 cytoplasm IBA --
GO:0005829 cytosol TAS --
genes like me logo Genes that share ontologies with UBE2C: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for UBE2C Gene

Pathways for UBE2C Gene

SuperPathways for UBE2C Gene

genes like me logo Genes that share pathways with UBE2C: view

Pathways by source for UBE2C Gene

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

UniProtKB/Swiss-Prot O00762-UBE2C_HUMAN

  • Pathway: Protein modification; protein ubiquitination.

Gene Ontology (GO) - Biological Process for UBE2C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000278 mitotic cell cycle TAS --
GO:0006511 ubiquitin-dependent protein catabolic process IDA 18485873
GO:0007094 mitotic spindle assembly checkpoint TAS --
GO:0008054 negative regulation of cyclin-dependent protein serine/threonine kinase by cyclin degradation IDA 9122200
GO:0010458 exit from mitosis IMP 19822757
genes like me logo Genes that share ontologies with UBE2C: view

Compounds for UBE2C Gene

(4) HMDB Compounds for UBE2C Gene

Compound Synonyms Cas Number PubMed IDs
Adenosine monophosphate
  • 5'-AMP
61-19-8
Adenosine triphosphate
  • 5'-(tetrahydrogen triphosphate) Adenosine
56-65-5
Phosphoric acid
  • acide phosphorique (FRENCH)
7664-38-2
Pyrophosphate
  • (4-)Diphosphoric acid ion
14000-31-8

(2) Novoseek inferred chemical compound relationships for UBE2C Gene

Compound -log(P) Hits PubMed IDs
lysine 19.1 1
oligonucleotide 11.8 1
genes like me logo Genes that share compounds with UBE2C: view

Transcripts for UBE2C Gene

Unigene Clusters for UBE2C Gene

Ubiquitin-conjugating enzyme E2C:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for UBE2C

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for UBE2C Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6a · 6b
SP1: - - -
SP2: - - -
SP3: - - - -
SP4: - - - -
SP5: - - - -
SP6: -
SP7: - - - - -
SP8:

Relevant External Links for UBE2C Gene

GeneLoc Exon Structure for
UBE2C
ECgene alternative splicing isoforms for
UBE2C

Expression for UBE2C Gene

mRNA expression in normal human tissues for UBE2C Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for UBE2C Gene

This gene is overexpressed in Esophagus - Mucosa (5.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for UBE2C Gene

SOURCE GeneReport for Unigene cluster for UBE2C Gene Hs.93002

genes like me logo Genes that share expressions with UBE2C: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for UBE2C Gene

Orthologs for UBE2C Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for UBE2C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 100 (a)
OneToMany
-- 36
  • 100 (a)
OneToMany
UBE2C 35
  • 99.44 (n)
  • 100 (a)
cow
(Bos Taurus)
Mammalia UBE2C 35
  • 91.43 (n)
  • 97.21 (a)
UBE2C 36
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia UBE2C 35
  • 93.11 (n)
  • 97.77 (a)
UBE2C 36
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ube2c 35
  • 87.52 (n)
  • 95.53 (a)
Ube2c 16
Ube2c 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia UBE2C 36
  • 93 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia UBE2C 36
  • 70 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ube2c 35
  • 89.76 (n)
  • 96.09 (a)
chicken
(Gallus gallus)
Aves UBE2C 35
  • 78.41 (n)
  • 88.57 (a)
UBE2C 36
  • 73 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ube2c 35
  • 72.47 (n)
  • 79.78 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.8806 35
zebrafish
(Danio rerio)
Actinopterygii ube2c 35
  • 68.44 (n)
  • 76.92 (a)
ube2c 36
  • 37 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP006238 35
  • 61.3 (n)
  • 60.34 (a)
fruit fly
(Drosophila melanogaster)
Insecta vih 35
  • 65.5 (n)
  • 66.43 (a)
vih 36
  • 56 (a)
OneToOne
vihar 37
  • 66 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes UBC11 35
  • 56.25 (n)
  • 63.28 (a)
UBC11 36
  • 52 (a)
OneToMany
UBC11 38
Alicante grape
(Vitis vinifera)
eudicotyledons Vvi.9379 35
thale cress
(Arabidopsis thaliana)
eudicotyledons UBC19 35
  • 58.9 (n)
  • 59.51 (a)
barley
(Hordeum vulgare)
Liliopsida Hv.2165 35
rice
(Oryza sativa)
Liliopsida Os.247 35
Os01g0273100 35
  • 64.2 (n)
  • 62.35 (a)
wheat
(Triticum aestivum)
Liliopsida Ta.3436 35
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes ubc11 35
  • 52.32 (n)
  • 56.97 (a)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.5287 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.3903 36
  • 60 (a)
OneToOne
Species with no ortholog for UBE2C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • worm (Caenorhabditis elegans)

Evolution for UBE2C Gene

ENSEMBL:
Gene Tree for UBE2C (if available)
TreeFam:
Gene Tree for UBE2C (if available)

Paralogs for UBE2C Gene

Paralogs for UBE2C Gene

genes like me logo Genes that share paralogs with UBE2C: view

Variants for UBE2C Gene

Sequence variations from dbSNP and Humsavar for UBE2C Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs368622 -- 45,812,051(-) ACGTC(C/T)GTAAT upstream-variant-2KB
rs382494 -- 45,816,121(-) AAATT(A/G)TTTAT intron-variant
rs440789 -- 45,812,854(+) ACCCA(C/G)AGCAA intron-variant, upstream-variant-2KB
rs445503 -- 45,817,430(-) TCCAC(A/C)GGGGA downstream-variant-500B
rs910396 -- 45,815,127(-) GGGCG(C/T)GGTGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for UBE2C Gene

Variant ID Type Subtype PubMed ID
nsv833990 CNV Loss 17160897

Relevant External Links for UBE2C Gene

HapMap Linkage Disequilibrium report
UBE2C

PCR Panel Products

  • Copy Number PCR Panels: for UBE2C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for UBE2C Gene

Disorders for UBE2C Gene

(3) Novoseek inferred disease relationships for UBE2C Gene

Disease -log(P) Hits PubMed IDs
primary tumor 15.8 1
tumors 6.27 12
metastasis 0 1

Relevant External Links for UBE2C

Genetic Association Database (GAD)
UBE2C
Human Genome Epidemiology (HuGE) Navigator
UBE2C
genes like me logo Genes that share disorders with UBE2C: view

No data available for UniProtKB/Swiss-Prot for UBE2C Gene

Publications for UBE2C Gene

  1. Dominant-negative cyclin-selective ubiquitin carrier protein E2- C/UbcH10 blocks cells in metaphase. (PMID: 9122200) Townsley F.M. … Ruderman J.V. (Proc. Natl. Acad. Sci. U.S.A. 1997) 2 3 4 23
  2. Autoubiquitylation of the V(D)J recombinase protein RAG1. (PMID: 14671314) Jones J.M. … Gellert M. (Proc. Natl. Acad. Sci. U.S.A. 2003) 3 23
  3. Detection of aberrations of ubiquitin-conjugating enzyme E2C gene (UBE2C) in advanced colon cancer with liver metastases by DNA microarray and two-color FISH. (PMID: 16772118) Takahashi Y. … Asai S. (Cancer Genet. Cytogenet. 2006) 3 23
  4. Expression and effect of inhibition of the ubiquitin-conjugating enzyme E2C on esophageal adenocarcinoma. (PMID: 17217624) Lin J. … Lin L. (Neoplasia 2006) 3 23
  5. Identification of overexpressed genes in hepatocellular carcinoma, with special reference to ubiquitin-conjugating enzyme E2C gene expression. (PMID: 17354233) Ieta K. … Mori M. (Int. J. Cancer 2007) 3 23

Products for UBE2C Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • Copy Number PCR Panels: for UBE2C
  • Pathway & Disease-focused RT² Profiler PCR Arrays
  • QIAGEN qRT-PCR Assays for microRNAs that regulate UBE2C
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for UBE2C
    • Block miRNA regulation of UBE2C using miScript Target Protectors
    • Addgene plasmids for UBE2C

    Sources for UBE2C Gene

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