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Aliases & Descriptions for UBE2C
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 6.3.2.19 3 OTTHUMP00000031653 2 OTTHUMP00000031655 2 UBCH10 1 , 2 , 3 , 5 UbcH10 3 dJ447F3.2 2
Descriptions Ubiquitin carrier protein C 3 Ubiquitin-protein ligase C 2 , 3 cyclin-selective ubiquitin carrier protein 2 mitotic-specific ubiquitin-conjugating enzyme 2 ubiquitin carrier protein E2-C 2 ubiquitin-conjugating enzyme E2C 2
Search outside databases for aliases for UBE2C genePrevious GC identifers: GC20P044169 GC20P045079 GC20P045126
Summaries for UBE2C (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for UBE2C : The modification of proteins with ubiquitin is an important cellular mechanism for targetingabnormal or short-lived proteins for degradation. Ubiquitination involves at least three classesof enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, andubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugatingenzyme family. This enzyme is required for the destruction of mitotic cyclins and for cell cycleprogression. Multiple transcript variants encoding different isoforms have been found for thisgene. [provided by RefSeq] UniProtKB/Swiss-Prot: UBE2C_HUMAN, O00762 Function : Catalyzes the covalent attachment of ubiquitin to other proteins. Required for thedestruction of mitotic cyclins
Gene Wiki entry for UBE2C
Genomic Location for UBE2C
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the UBE2C gene Entrez Gene cytogenetic band: 20q13.12 Ensembl cytogenetic band: 20q13.12 HGNC cytogenetic band: 20q13.12 UBE2C Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure
GeneLoc location for GC20P043874:
(about GC identifiers )
Start:
43,874,662 bp from pter
End:
43,879,003 bp from pter
Size:
4,342 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000020.9 NT_011362.9 Proteins for UBE2C
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: UBE2C_HUMAN, O00762 (See
protein sequence )Recommended Name: Ubiquitin-conjugating enzyme E2 C Size : 179 amino acids; 19652 Da
PDB structures from and Proteopedia : 1I7K (3D)
 
REFSEQ proteins (6 alternative transcripts):
NP_008950.1 NP_861515.1 NP_861516.1 NP_861517.1 NP_861518.1 NP_861519.1 ENSEMBL proteins: ENSP00000243893 ENSP00000335674 ENSP00000333975 ENSP00000348838 ENSP00000361649 ENSP00000361660 ENSP00000385878 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): UBE2C 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for UBE2C: Assays for UBE2C:
Protein
Domains/ Families for UBE2C(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O00762 ProtoNet protein and cluster: O00762
1 Blocks protein family : IPB000608 Ubiquitin-conjugating enzymes UniProtKB/Swiss-Prot: UBE2C_HUMAN, O00762 Similarity : Belongs to the ubiquitin-conjugating enzyme family
Gene Function for UBE2C
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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Sigma-Aldrich , RNAi from
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RNAi Products ,
Clones , and
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Millipore ,
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Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_181799 Applied Biosystems Silencer ® siRNAs for UBE2C Sigma-Aldrich siRNA and siRNA Panels for UBE2C Sigma-Aldrich shRNA Panels and shRNA for UBE2C Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 6 ): NM_007019                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 6 ): NM_007019                                  untagged cDNA clones in CMV expression vector (see all 7 ): NM_007019  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_007019 UniProtKB/Swiss-Prot: UBE2C_HUMAN, O00762 Function : Catalyzes the covalent attachment of ubiquitin to other proteins. Required for thedestruction of mitotic cyclins Catalytic activity : ATP + ubiquitin + protein lysine = AMP + diphosphate + proteinN-ubiquityllysine Enzyme Number (IUBMB): EC 6.3.2.19
3 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for UBE2C
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for UBE2C (Your Favorite Gene powered by Ingenuity) UniProtKB/Swiss-Prot: UBE2C_HUMAN, O00762 Pathway : Protein modification; protein ubiquitination
Gene Network CentralTM Interacting Genes and Proteins Network for UBE2C 5/72 Interacting proteins for UBE2C (ENSP00000348838 3 ) via UniProtKB, MINT, and/or STRING (see all 72
)About this table 5/13 Gene Ontology (GO) biological process terms (links to tree view) (see all 13
):
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Drugs & Compounds for UBE2C (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
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Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for UBE2C 2 Novoseek chemical compound relationships for UBE2C gene
About this table
Transcripts for UBE2C(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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siRNAs from Applied Biosystems ,
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shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_181799 Sigma-Aldrich siRNA and siRNA Panels for UBE2C Sigma-Aldrich shRNA Panels and shRNA for UBE2C Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_007019 NM_181799 NM_181800 NM_181801 NM_181802 NM_181803
REFSEQ mRNAs for UBE2C gene (6 alternative transcripts): NM_007019.2 NM_181799.1 NM_181800.1 NM_181801.2 NM_181802.1 NM_181803.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_007019 NM_181799 NM_181800 NM_181801 NM_181802 NM_181803
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 6 ): NM_007019                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 6 ): NM_007019                                  untagged cDNA clones in CMV expression vector (see all 7 ): NM_007019  
Additional cDNA sequence: AK311949.1 BC007656.2 BC016292.1 BC028161.1 BC032677.2 BC050736.1 BT007300.1 BT020165.1 BT020166.1 CR456988.1 CR593952.1 CR610834.1 U73379.1
17 DOTS entries : DT.455083 DT.446076 DT.101984847 DT.91766689 DT.95092516 DT.101984846 DT.100822418 DT.120817240 DT.120817711 DT.102842123 DT.102842126 DT.120817606 DT.102842114 DT.120817859 DT.95189185 DT.95245584 DT.100038110
24/252 AceView cDNA sequences (see all 252
):BM845270 BM549174 BU625723 BI870709 BU509336 BE268039 BU844974 BU727867 AI250679 BX344527 BM698699 NM_181800 AI264541 BQ218554 BE904898 NM_007019 BC016292 BU506804 BM755952 AA596035 BM467729 BU509084 BM781915 CR610834
highest scoring ESTs for UBE2C :U73379 AA136118 AA149943 AA160710 AA305922 AA382274 AA401483 AA403150 AA430504 AA554943
Unigene Cluster for UBE2C: Ubiquitin-conjugating enzyme E2C Hs.93002 [show with all ESTs ] Unigene Representative Sequence: BC032677 GeneLoc Exon Structure 5/8 Alternative Splicing Database (ASD) splice patterns (SP) for UBE2C (see all 8
) ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6a · 6b SP1 :       -   -     -           SP2 :       -   -       -         SP3 :       -   -     -   -         SP4 :       -   -   -     -         SP5 :       -   -   -   -          
About this scheme ECgene alternative splicing isoforms for UBE2C 7 Ensembl transcripts including schematic representations : ENST00000243893
ENST00000335046
ENST00000352551
ENST00000356455
ENST00000372568
ENST00000372579
ENST00000405520
Expression for UBE2C
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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UBE2C expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for UBE2C 1 / 2 / 3
3 probe-sets matching UBE2C gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CTGCCGAGCTSOURCE GeneReport for Unigene cluster: Hs.93002 Expression variation in blood from EXPOLDB for UBE2C
Orthologs for UBE2C
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for UBE2C gene from 5/20 species (see all 20
)
About this table Species with no ortholog for UBE2C ENSEMBL Gene Tree for UBE2C Paralogs for UBE2C (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for UBE2C gene UBE2B 2 UBE2A 2 Pseudogenes 3 related pseudogenes
SNPs/Variants for UBE2C (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for UBE2C (up to first 250kb)
Disorders & Mutations for UBE2C
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
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OMIM: 605574 3 Novoseek disease relationships for UBE2C gene
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Medical News for UBE2C (Possibly Related Articles in
Doctor's Guide )
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--
Publications for UBE2C (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/50 PubMed articles for UBE2C gene (see all 50
): Dominant-negative cyclin-selective ubiquitin carrier protein E2- C/UbcH10 blocks cells in metaphase. (PubMed id 9122200) 1, 2, 3, 4 Townsley F.M.... Ruderman J.V. (1997) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Structural and functional analysis of the human mitotic-specific ubiquitin-conjugating enzyme, UbcH10. (PubMed id 11927573) 3, 4 Lin Y.... Basavappa R. (2002) The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052) 3, 4 Deloukas P....Rogers J. (2001) Identification of overexpressed genes in hepatocellular carcinoma, with special reference to ubiquitin-conjugating enzyme E2C gene expression. (PubMed id 17354233) 1, 3 Ieta K....Mori M. (2007) Expression and effect of inhibition of the ubiquitin-conjugating enzyme E2C on esophageal adenocarcinoma. (PubMed id 17217624) 1, 3 Lin J....Lin L. (2006) Detection of aberrations of ubiquitin-conjugating enzyme E2C gene (UBE2C) in advanced colon cancer with liver metastases by DNA microarray and two-color FISH. (PubMed id 16772118) 1, 3 Takahashi Y....Asai S. (2006) Expression of ubiquitin-conjugating enzyme E2C/UbcH10 in astrocytic tumors. (PubMed id 18331723) 1, 3 Jiang L....Han H.X. (2008) Analysis of UbcH10 expression represents a useful tool for the diagnosis and therapy of astrocytic tumors. (PubMed id 18666437) 3 Donato G....Fusco A. (2008) Array-CGH identifies cyclin D1 and UBCH10 amplicons in anaplastic thyroid carcinoma. (PubMed id 18753363) 3 Lee J.J....Larsson C. (2008)
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Genome Databases showing UBE2C
(According to
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and/or
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Specialized Databases showing UBE2C (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for UBE2C (Reagents available from Applied Biosystems , Antibodies and assays by Cell
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