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Aliases for UBDP1 Gene

Aliases for UBDP1 Gene

  • Ubiquitin D Pseudogene 1 2 3 5
  • DJ994E9.3 3

External Ids for UBDP1 Gene

Previous GeneCards Identifiers for UBDP1 Gene

  • GC00U914168
  • GC06U900624
  • GC06M029540
  • GC06M029435
  • GC06M029438
  • GC06M029440
  • GC06M029466
  • GC06M029467
  • GC06M029468
  • GC06M029469

Summaries for UBDP1 Gene

GeneCards Summary for UBDP1 Gene

UBDP1 (Ubiquitin D Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBDP1 Gene

Genomics for UBDP1 Gene

Regulatory Elements for UBDP1 Gene

Enhancers for UBDP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F028586 0.7 ENCODE 16.2 +882.6 882641 1.9 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GPX6 GPX5 ZNF603P ZNF90P2 KRT18P1 OR2W1 OR2AD1P OR2P1P ENSG00000228364 OR2B3
GH06F030065 0.6 ENCODE 16.2 -597.0 -597000 3.0 HDGF PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 HCG4P3 PPP1R10 IFITM4P HLA-A TRIM26 PAIP1P1 RPL7P4 HCG4P7 HLA-P UBQLN1P1
GH06F030194 0.4 ENCODE 16.2 -725.5 -725522 1.6 ZFP64 ARID4B DMAP1 YY1 SLC30A9 ZNF302 SP3 SP5 MXD4 ZHX2 HCG18 GTF2H4 PPP1R10 ETF1P1 DHX16 PAIP1P1 ZNRD1ASP HCG4P7 TRIM31 GNL1
GH06F029467 0.7 FANTOM5 0.8 +2.1 2107 0.3 OR10C1 ZFP57 MAS1L OR11A1 OR14J1 OR2W1 OR2J3 OR2B3 OR12D2 OR5V1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around UBDP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for UBDP1 Gene

Chromosome:
6
Start:
29,464,596 bp from pter
End:
29,469,806 bp from pter
Size:
5,211 bases
Orientation:
Minus strand

Genomic View for UBDP1 Gene

Genes around UBDP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBDP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBDP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for UBDP1 Gene

Post-translational modifications for UBDP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBDP1 Gene

Domains & Families for UBDP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBDP1 Gene

Function for UBDP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBDP1 Gene

Localization for UBDP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBDP1 Gene

Pathways & Interactions for UBDP1 Gene

SuperPathways for UBDP1 Gene

No Data Available

Interacting Proteins for UBDP1 Gene

Gene Ontology (GO) - Biological Process for UBDP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBDP1 Gene

Transcripts for UBDP1 Gene

mRNA/cDNA for UBDP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBDP1 Gene

No ASD Table

Relevant External Links for UBDP1 Gene

GeneLoc Exon Structure for
UBDP1
ECgene alternative splicing isoforms for
UBDP1

Expression for UBDP1 Gene

mRNA expression in normal human tissues for UBDP1 Gene

mRNA differential expression in normal tissues according to GTEx for UBDP1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of UBDP1 Gene:

UBDP1
genes like me logo Genes that share expression patterns with UBDP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UBDP1 Gene

Orthologs for UBDP1 Gene

Evolution for UBDP1 Gene

ENSEMBL:
Gene Tree for UBDP1 (if available)
TreeFam:
Gene Tree for UBDP1 (if available)

No data available for Orthologs for UBDP1 Gene

Paralogs for UBDP1 Gene

No data available for Paralogs for UBDP1 Gene

Variants for UBDP1 Gene

Relevant External Links for UBDP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBDP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBDP1 Gene

Disorders for UBDP1 Gene

No disorders were found for UBDP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for UBDP1 Gene

Publications for UBDP1 Gene

No publications were found for UBDP1 Gene.

Products for UBDP1 Gene

Sources for UBDP1 Gene

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