Free for academic non-profit institutions. Other users need a Commercial license

Aliases for UBALD1 Gene

Aliases for UBALD1 Gene

  • UBA-Like Domain Containing 1 2 3
  • Family With Sequence Similarity 100, Member A 2 3
  • FAM100A 3 4
  • UBA-Like Domain-Containing Protein 1 3
  • Protein FAM100A 3
  • PP11303 3

External Ids for UBALD1 Gene

Previous Symbols for UBALD1 Gene

  • FAM100A

Summaries for UBALD1 Gene

GeneCards Summary for UBALD1 Gene

UBALD1 (UBA-Like Domain Containing 1) is a Protein Coding gene. An important paralog of this gene is UBALD2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBALD1 Gene

Genomics for UBALD1 Gene

Genomic Location for UBALD1 Gene

Start:
4,608,883 bp from pter
End:
4,615,027 bp from pter
Size:
6,145 bases
Orientation:
Minus strand

Genomic View for UBALD1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UBALD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBALD1 Gene

No data available for Regulatory Elements for UBALD1 Gene

Proteins for UBALD1 Gene

  • Protein details for UBALD1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TB05-UBAD1_HUMAN
    Recommended name:
    UBA-like domain-containing protein 1
    Protein Accession:
    Q8TB05
    Secondary Accessions:
    • Q71MF6

    Protein attributes for UBALD1 Gene

    Size:
    177 amino acids
    Molecular mass:
    18954 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for UBALD1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for UBALD1 Gene

Proteomics data for UBALD1 Gene at MOPED

Post-translational modifications for UBALD1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBALD1 Gene

Domains for UBALD1 Gene

Protein Domains for UBALD1 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

UBAD1_HUMAN
Family:
  • Belongs to the UBALD family.:
    • Q8TB05
genes like me logo Genes that share domains with UBALD1: view

No data available for Gene Families for UBALD1 Gene

Function for UBALD1 Gene

Gene Ontology (GO) - Molecular Function for UBALD1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with UBALD1: view

Phenotypes for UBALD1 Gene

genes like me logo Genes that share phenotypes with UBALD1: view

miRNA for UBALD1 Gene

miRTarBase miRNAs that target UBALD1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for UBALD1 Gene

Localization for UBALD1 Gene

No data available for Gene Ontology (GO) - Cellular Components for UBALD1 Gene

Pathways for UBALD1 Gene

SuperPathways for UBALD1 Gene

No Data Available

Interacting Proteins for UBALD1 Gene

Selected Interacting proteins: Q8TB05-UBAD1_HUMAN for UBALD1 Gene via I2D

Gene Ontology (GO) - Biological Process for UBALD1 Gene

None

No data available for Pathways by source for UBALD1 Gene

Transcripts for UBALD1 Gene

Unigene Clusters for UBALD1 Gene

UBA-like domain containing 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UBALD1 Gene

ExUns: 1 ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b · 4c ^ 5 ^ 6a · 6b · 6c · 6d
SP1: - - - - -
SP2: - - -
SP3: - -
SP4: - - - -
SP5: -
SP6: - -

Relevant External Links for UBALD1 Gene

GeneLoc Exon Structure for
UBALD1
ECgene alternative splicing isoforms for
UBALD1

Expression for UBALD1 Gene

mRNA expression in normal human tissues for UBALD1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for UBALD1 Gene

SOURCE GeneReport for Unigene cluster for UBALD1 Gene Hs.513313

genes like me logo Genes that share expressions with UBALD1: view

Orthologs for UBALD1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for UBALD1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia UBALD1 36
  • 99.81 (n)
  • 100 (a)
UBALD1 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MGC142811 37
  • 94 (a)
OneToOne
UBALD1 36
  • 90.4 (n)
  • 94.92 (a)
dog
(Canis familiaris)
Mammalia UBALD1 37
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ubald1 36
  • 90.67 (n)
  • 93.14 (a)
Ubald1 16
Ubald1 37
  • 93 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia UBALD1 37
  • 66 (a)
OneToOne
chicken
(Gallus gallus)
Aves FAM100A 36
  • 68.14 (n)
  • 66.18 (a)
UBALD1 37
  • 56 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii Dr.14752 36
ubald1a 36
  • 69.09 (n)
  • 76.82 (a)
ubald1b 37
  • 70 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 58 (a)
OneToMany
Species with no ortholog for UBALD1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for UBALD1 Gene

ENSEMBL:
Gene Tree for UBALD1 (if available)
TreeFam:
Gene Tree for UBALD1 (if available)

Paralogs for UBALD1 Gene

Paralogs for UBALD1 Gene

Selected SIMAP similar genes for UBALD1 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with UBALD1: view

Variants for UBALD1 Gene

Sequence variations from dbSNP and Humsavar for UBALD1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs841184 -- 4,610,341(+) ACCCA(C/T)GGAGC intron-variant
rs841185 -- 4,611,859(+) AGTAT(G/T)TGAGG intron-variant
rs841186 -- 4,613,104(+) GGCAG(C/G)GAGGG intron-variant
rs841187 -- 4,613,130(+) TGTGT(A/G)ACTGC intron-variant
rs841188 -- 4,613,804(+) CGGGG(A/G)AGTGG intron-variant

Relevant External Links for UBALD1 Gene

HapMap Linkage Disequilibrium report
UBALD1

No data available for Structural Variations from Database of Genomic Variants (DGV) for UBALD1 Gene

Disorders for UBALD1 Gene

No disorders were found for UBALD1 Gene.

No data available for UniProtKB/Swiss-Prot for UBALD1 Gene

Publications for UBALD1 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Large-scale cDNA transfection screening for genes related to cancer development and progression. (PMID: 15498874) Wan D. … Gu J. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3 4
  3. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for UBALD1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate UBALD1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for UBALD1
    • Block miRNA regulation of UBALD1 using miScript Target Protectors

    Sources for UBALD1 Gene

    Back to Top

    Content