UBALD1 Gene

Aliases
for UBALD1 gene

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, ¹⁰fRNAdb, ¹²H-InvDB, ¹³NCBI, ¹⁴NONCODE, and/or ¹⁵RNAdb)
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Summaries
for UBALD1 gene

(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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Genomic Views
for UBALD1 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:

NC_000016.9  NC_018927.2  NT_010393.17  

SwitchGear Promoter luciferase reporter plasmid: UBALD1 promoter sequence

DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat UBALD1

UBALD1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)


GeneLoc information about chromosome 16         GeneLoc Exon Structure

GeneLoc location for GC16M004656:  view genomic region     (about GC identifiers)

Proteins
for UBALD1 gene

(According to ¹UniProtKB, HORDE, ²neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, antibodies-online, and/or GeneTex,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
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Explore the universe of human proteins at neXtProt for UBALD1: NX_Q8TB05

Explore proteomics data for UBALD1 at MOPED


See UBALD1 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

UBALD1 Human Recombinant Protein Products:

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	Novus Biologicals UBALD1 Protein Novus Biologicals UBALD1 Lysate
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	Browse Proteins at Cloud-Clone Corp.
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	Search GeneTex for Proteins for UBALD1
	antibodies-online proteins for UBALD1 (4 products)
	Search antibodies-online for peptides for UBALD1

UBALD1 Antibody Products:

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	antibodies-online antibodies for UBALD1

UBALD1 Assay Products:

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	Browse Enzo Life Sciences for kits & assays
	Browse ELISAs at Cloud-Clone Corp. Browse CLIAs at Cloud-Clone Corp.
	Search eBioscience for ELISAs for UBALD1
	antibodies-online kits for UBALD1 (6 products)

Domains /
Families
for UBALD1 gene

(According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GenesLikeMe)
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ProtoNet protein and cluster: Q8TB05

Find genes that share domains with UBALD1           About GenesLikeMe

Function
for UBALD1 gene

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, genOway,
transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene, Sets of similar genes according to GenesLikeMe)
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     Gene Ontology (GO): 1 molecular function term:    About this table

genOway: Develop your customized and physiologically relevant rodent model for UBALD1

miRNA Products:		miRTarBase miRNAs that target UBALD1: hsa-mir-23a-3p (MIRT050440)
		Block miRNA regulation of human, mouse, rat UBALD1 using miScript Target Protectors
		Search for qRT-PCR Assays for microRNAs that regulate UBALD1
		SwitchGear 3'UTR luciferase reporter plasmid: UBALD1 3' UTR sequence

Inhib. RNA Products:		OriGene RNAi products in human, mouse, rat for UBALD1
		Predesigned siRNA for gene silencing in human, mouse, rat UBALD1

Gene Editing Products:

DNA2.0 Custom Protein Engineering Service for UBALD1

Clone Products:		OriGene clones in human, mouse for UBALD1 (see all 6) OriGene ORF clones in mouse, rat for UBALD1 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
		GenScript Custom all cDNA clones Services for UBALD1
		Sino Biological Human cDNA Clone for UBALD1
		DNA2.0 Custom Codon Optimized Gene Synthesis Service for UBALD1
		Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat UBALD1

Cell Line Products:		GenScript Custom overexpressing Cell Line Services for UBALD1
		Browse ESI BIO Cell Lines and PureStem Progenitors for UBALD1

In Situ Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UBALD1

Localization
for UBALD1 gene

(According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene, Sets of similar genes according to GenesLikeMe)
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Pathways & Interactions
for UBALD1 gene

(SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GenesLikeMe, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene, Sets of similar genes according to GenesLikeMe)
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Drugs & Compounds
for UBALD1 gene

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, Sets of similar genes according to GenesLikeMe)
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Transcripts
for UBALD1 gene

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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Expression
for UBALD1 gene

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GenesLikeMe, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE ¹MOPED, ²PaxDb, and ³MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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UBALD1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>^2/3
CGAP TAG: --

About this image

Primer Products:		OriGene qSTAR qPCR primer pairs in human, mouse for UBALD1
		Search Pre-validated RT2 qPCR Primer Assays in human, mouse, rat UBALD1
		QuantiTect SYBR Green Assays in human, mouse, rat UBALD1
		QuantiFast Probe-based Assays in human, mouse, rat UBALD1

In Situ Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for UBALD1

Orthologs
for UBALD1 gene

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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Paralogs
for UBALD1 gene

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68,Sets of similar genes according to GenesLikeMe)
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Paralogs for UBALD1 gene

UBALD2²  

2 SIMAP similar genes for UBALD1 using alignment to 6 protein entries:     UBAD1_HUMAN (see all proteins):

FAM100A    UBALD2

Find genes that share paralogs with UBALD1           About GenesLikeMe

Genomic Variants
for UBALD1 gene

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, ⁴UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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Selected SNPs for UBALD1 (see all 202)    About this table

Genomic Data					Transcription Related Data				Allele Frequencies
SNP ID	Valid	Clinical significance	Chr 16 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
-1st2nd3rd	-1st2nd3rd	-1st2nd3rd	-1st2nd3rd	--	--	--	-1st2nd3rd	--	--	-1st2nd3rd	-1st2nd3rd	-1st2nd3rd
rs1460172391,2		--	4625509(+)	AGGCCA/GGGCTC	1	--	int1		0	--	--	--	--
rs1895124711,2		--	4625537(+)	CCCAGA/CCACTG	1	--	int1		0	--	--	--	--
rs1929690391,2		--	4625547(+)	GGAGCC/TGAGAC	1	--	int1		0	--	--	--	--
rs22794081,2	C,F,A,H	--	4625571(+)	GAGATA/GAAACC	1	--	int1		24		EA NS NA WA	4006
rs1147032511,2	F	--	4625600(+)	GTGTGA/GGCCCT	1	--	int1		1		WA	118
rs1399921401,2	C	--	4625737(+)	AGCACA/GCTGTG	1	--	int1		0	--	--	--	--
rs1417412381,2		--	4625784(+)	GAGGCG/TCGGGG	1	--	int1		0	--	--	--	--
rs794112611,2	C,F	--	4625785(+)	AGGCTC/TGGGGT	1	--	int1		1		NA	120
rs595912761,2	C	--	4625823(+)	AGAACC/GAGCTG	1	--	int1		0	--	--	--	--
rs116414191,2	C,H	--	4626254(+)	GGCCCC/TCAAGG	1	--	ut31		0	--	--	--	--

HapMap Linkage Disequilibrium report for UBALD1 (4658884 - 4665028 bp)

Structural Variations
      Database of Genomic Variants (DGV) variations for UBALD1: --

Site Specific Mutation Identification with PCR Assays

SeqTarget long-range PCR primers for resequencing UBALD1

DNA2.0 Custom Variant and Variant Library Synthesis for UBALD1

Disorders / Diseases
for UBALD1 gene

(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB, Sets of similar genes according to GenesLikeMe)
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Publications
for UBALD1 gene

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
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1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{1, 2} Gerhard D.S.... Malek J. (Genome Res. 2004)
2. Large-scale cDNA transfection screening for genes related to cancer development and progression. (PubMed id 15498874)^{1, 2} Wan D....Gu J. (Proc. Natl. Acad. Sci. U.S.A. 2004)
3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PubMed id 17207965)¹ Lamesch P.... Vidal M. (Genomics 2007)
4. A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070)¹ Stelzl U.... Wanker E.E. (Cell 2005)
5. The sequence and analysis of duplication-rich human chromosome 16. (PubMed id 15616553)² Martin J.... Pennacchio L.A. (Nature 2004)
6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)¹ Ota T.... Sugano S. (Nat. Genet. 2004)
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002)

External Searches for UBALD1 gene

Genome Databases showing UBALD1 gene

Other Databases showing UBALD1 gene

Specialized Databases showing UBALD1 gene

Products
for UBALD1 gene

(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, eBioscience, antibodies-online, GeneTex, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from genOway)
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