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Aliases for UBAC2-AS1 Gene

Subcategory (RNA class) for UBAC2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for UBAC2-AS1 Gene

  • UBAC2 Antisense RNA 1 2 3 5
  • UBAC2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBAC2-AS1 Gene

Previous GeneCards Identifiers for UBAC2-AS1 Gene

  • GC13M099850

Summaries for UBAC2-AS1 Gene

GeneCards Summary for UBAC2-AS1 Gene

UBAC2-AS1 (UBAC2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBAC2-AS1 Gene

Genomics for UBAC2-AS1 Gene

Regulatory Elements for UBAC2-AS1 Gene

Enhancers for UBAC2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F099198 1.1 ENCODE 0.8 +0.1 109 5.1 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 SP3 SP5 LINC00554 STK24-AS1 RN7SKP9 LINC01039 CFL1P8 TM9SF2 HMGB3P4 UBAC2 GPR18 UBAC2-AS1
GH13F099204 0.8 ENCODE 0.8 -4.1 -4084 1.4 HDGF PKNOX1 TBL1XR1 CHD4 RELA EED ETV6 CREM RFX1 MTA2 UBAC2 GC13P099207 UBAC2-AS1
GH13F099203 0.2 ENCODE 0.8 -2.5 -2549 0.2 GC13P099207 UBAC2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UBAC2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for UBAC2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000056658 -144 3400 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 SP3 SP5

Genomic Location for UBAC2-AS1 Gene

99,196,374 bp from pter
99,200,757 bp from pter
4,384 bases
Minus strand

Genomic View for UBAC2-AS1 Gene

Genes around UBAC2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBAC2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBAC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBAC2-AS1 Gene

Proteins for UBAC2-AS1 Gene

Post-translational modifications for UBAC2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBAC2-AS1 Gene

Domains & Families for UBAC2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBAC2-AS1 Gene

Function for UBAC2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBAC2-AS1 Gene

Localization for UBAC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBAC2-AS1 Gene

Pathways & Interactions for UBAC2-AS1 Gene

SuperPathways for UBAC2-AS1 Gene

No Data Available

Interacting Proteins for UBAC2-AS1 Gene

Gene Ontology (GO) - Biological Process for UBAC2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for UBAC2-AS1 Gene

Transcripts for UBAC2-AS1 Gene

mRNA/cDNA for UBAC2-AS1 Gene

(5) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UBAC2-AS1 Gene

UBAC2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UBAC2-AS1 Gene

No ASD Table

Relevant External Links for UBAC2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for UBAC2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for UBAC2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UBAC2-AS1 Gene

This gene is overexpressed in Testis (x6.8).

SOURCE GeneReport for Unigene cluster for UBAC2-AS1 Gene:

genes like me logo Genes that share expression patterns with UBAC2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UBAC2-AS1 Gene

Orthologs for UBAC2-AS1 Gene

Evolution for UBAC2-AS1 Gene

Gene Tree for UBAC2-AS1 (if available)
Gene Tree for UBAC2-AS1 (if available)

No data available for Orthologs for UBAC2-AS1 Gene

Paralogs for UBAC2-AS1 Gene

No data available for Paralogs for UBAC2-AS1 Gene

Variants for UBAC2-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBAC2-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs11069357 -- 99,197,376(+) TTGCC(A/G)GATGT nc-transcript-variant
rs112281493 -- 99,202,699(+) CGTAG(A/G)TCTGG intron-variant, upstream-variant-2KB
rs11303451 -- 99,196,209(+) GTCTC(-/A)AAAAA downstream-variant-500B
rs113860034 -- 99,201,016(+) GCAGC(A/G)GGGAC intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs114014993 -- 99,200,659(+) CGCCA(A/C/T)CGTTT nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for UBAC2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3582749 CNV gain 25503493
esv3892433 CNV gain 25118596
nsv1050094 CNV gain 25217958

Relevant External Links for UBAC2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for UBAC2-AS1 Gene

Disorders for UBAC2-AS1 Gene

Relevant External Links for UBAC2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for UBAC2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBAC2-AS1 Gene

Publications for UBAC2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3 64

Products for UBAC2-AS1 Gene

Sources for UBAC2-AS1 Gene

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