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Aliases for UBAC2-AS1 Gene

Subcategory (RNA class) for UBAC2-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for UBAC2-AS1 Gene

  • UBAC2 Antisense RNA 1 2 3
  • UBAC2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for UBAC2-AS1 Gene

ORGUL Members for UBAC2-AS1 Gene

Summaries for UBAC2-AS1 Gene

GeneCards Summary for UBAC2-AS1 Gene

UBAC2-AS1 (UBAC2 Antisense RNA 1) is an RNA Gene, and belongs to the lncRNA class.

fRNAdb sequence ontologies for UBAC2-AS1 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for UBAC2-AS1 Gene

Genomics for UBAC2-AS1 Gene

Genomic Location for UBAC2-AS1 Gene

Start:
99,196,374 bp from pter
End:
99,200,757 bp from pter
Size:
4,384 bases
Orientation:
Minus strand

Genomic View for UBAC2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for UBAC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBAC2-AS1 Gene

No data available for Regulatory Elements for UBAC2-AS1 Gene

Proteins for UBAC2-AS1 Gene

Post-translational modifications for UBAC2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBAC2-AS1 Gene

Domains for UBAC2-AS1 Gene

Gene Families for UBAC2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with UBAC2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBAC2-AS1 Gene

Function for UBAC2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for UBAC2-AS1 Gene

Localization for UBAC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBAC2-AS1 Gene

Pathways for UBAC2-AS1 Gene

SuperPathways for UBAC2-AS1 Gene

No Data Available

Interacting Proteins for UBAC2-AS1 Gene

Gene Ontology (GO) - Biological Process for UBAC2-AS1 Gene

None

No data available for Pathways by source for UBAC2-AS1 Gene

Transcripts for UBAC2-AS1 Gene

mRNA/cDNA for UBAC2-AS1 Gene

(5) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for UBAC2-AS1 Gene

UBAC2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for UBAC2-AS1 Gene

No ASD Table

Relevant External Links for UBAC2-AS1 Gene

GeneLoc Exon Structure for
UBAC2-AS1
ECgene alternative splicing isoforms for
UBAC2-AS1

Expression for UBAC2-AS1 Gene

mRNA expression in normal human tissues for UBAC2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for UBAC2-AS1 Gene

This gene is overexpressed in Testis (6.8).

SOURCE GeneReport for Unigene cluster for UBAC2-AS1 Gene Hs.225914

genes like me logo Genes that share expressions with UBAC2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for UBAC2-AS1 Gene

Orthologs for UBAC2-AS1 Gene

Evolution for UBAC2-AS1 Gene

ENSEMBL:
Gene Tree for UBAC2-AS1 (if available)
TreeFam:
Gene Tree for UBAC2-AS1 (if available)

No data available for Orthologs for UBAC2-AS1 Gene

Paralogs for UBAC2-AS1 Gene

No data available for Paralogs for UBAC2-AS1 Gene

Variants for UBAC2-AS1 Gene

Sequence variations from dbSNP and Humsavar for UBAC2-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs3742131 -- 99,196,959(-) TCAGG(G/T)TAAGC nc-transcript-variant
rs3825427 -- 99,196,717(-) TAAGA(G/T)AATCA nc-transcript-variant
rs9517646 -- 99,196,065(+) ttagc(C/T)gagcg downstream-variant-500B
rs9517647 -- 99,198,169(+) tgtat(G/T)tattt intron-variant
rs9554570 -- 99,196,142(+) aggcg(A/G)agctt downstream-variant-500B

Relevant External Links for UBAC2-AS1 Gene

HapMap Linkage Disequilibrium report
UBAC2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for UBAC2-AS1 Gene

Disorders for UBAC2-AS1 Gene

No disorders were found for UBAC2-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for UBAC2-AS1 Gene

Publications for UBAC2-AS1 Gene

  1. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for UBAC2-AS1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate UBAC2-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for UBAC2-AS1
    • Block miRNA regulation of UBAC2-AS1 using miScript Target Protectors

    Sources for UBAC2-AS1 Gene

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