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Aliases for UBA52P5 Gene

Subcategory (RNA class) for UBA52P5 Gene

antisense

Aliases for UBA52P5 Gene

  • Ubiquitin A-52 Residue Ribosomal Protein Fusion Product 1 Pseudogene 5 2 3 5
  • Ribosomal Protein L40 Pseudogene 3
  • RPL40_2_948 3

External Ids for UBA52P5 Gene

ORGUL Members for UBA52P5 Gene

Previous GeneCards Identifiers for UBA52P5 Gene

  • GC08U901112
  • GC08P124251
  • GC08P119574

Summaries for UBA52P5 Gene

GeneCards Summary for UBA52P5 Gene

UBA52P5 (Ubiquitin A-52 Residue Ribosomal Protein Fusion Product 1 Pseudogene 5) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBA52P5 Gene

Genomics for UBA52P5 Gene

Regulatory Elements for UBA52P5 Gene

Enhancers for UBA52P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G123240 1.1 ENCODE 0.7 +4.2 4233 1.9 HNRNPUL1 PKNOX1 CREB3L1 ARNT AGO1 ZFP64 ARID4B SIN3A DMAP1 YY1 WDYHV1 FAM83A UBA52P5 C8orf76
GH08G123235 0.8 ENCODE 0.7 -1.1 -1060 1.0 HDGF PKNOX1 SIN3A SCRT2 FOS IKZF2 CEBPB TBX21 MAFF SMARCA4 UBA52P5 GC08P123216
GH08G123232 0.6 ENCODE 0.7 -4.2 -4248 1.7 FOXA2 JUND ATF3 SMARCA4 SIN3A REST MNT C8orf76 FAM83A UBA52P5 GC08P123216
GH08G123216 1 ENCODE 0.4 -19.4 -19443 1.8 HDGF FOXA2 PKNOX1 BRCA1 ZBTB7B YY1 ELK1 FOS ZNF623 SMARCA4 FAM83A ENSG00000253258 ENSG00000221461 GC08P123216 UBA52P5
GH08G123220 0.7 ENCODE 0.4 -16.0 -16047 0.2 CTCF ARNT ARID4B SIN3A RAD21 RFX5 ZKSCAN1 SMC3 DEK ZNF654 FAM83A ENSG00000253258 ENSG00000221461 GC08P123216 UBA52P5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UBA52P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for UBA52P5 Gene

Chromosome:
8
Start:
123,236,852 bp from pter
End:
123,237,216 bp from pter
Size:
365 bases
Orientation:
Plus strand

Genomic View for UBA52P5 Gene

Genes around UBA52P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBA52P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBA52P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBA52P5 Gene

Proteins for UBA52P5 Gene

Post-translational modifications for UBA52P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBA52P5 Gene

Domains & Families for UBA52P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBA52P5 Gene

Function for UBA52P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBA52P5 Gene

Localization for UBA52P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBA52P5 Gene

Pathways & Interactions for UBA52P5 Gene

SuperPathways for UBA52P5 Gene

No Data Available

Interacting Proteins for UBA52P5 Gene

Gene Ontology (GO) - Biological Process for UBA52P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBA52P5 Gene

Transcripts for UBA52P5 Gene

mRNA/cDNA for UBA52P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBA52P5 Gene

No ASD Table

Relevant External Links for UBA52P5 Gene

GeneLoc Exon Structure for
UBA52P5
ECgene alternative splicing isoforms for
UBA52P5

Expression for UBA52P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBA52P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of UBA52P5 Gene:

UBA52P5
genes like me logo Genes that share expression patterns with UBA52P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBA52P5 Gene

Orthologs for UBA52P5 Gene

Evolution for UBA52P5 Gene

ENSEMBL:
Gene Tree for UBA52P5 (if available)
TreeFam:
Gene Tree for UBA52P5 (if available)

No data available for Orthologs for UBA52P5 Gene

Paralogs for UBA52P5 Gene

No data available for Paralogs for UBA52P5 Gene

Variants for UBA52P5 Gene

Relevant External Links for UBA52P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBA52P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBA52P5 Gene

Disorders for UBA52P5 Gene

Relevant External Links for UBA52P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBA52P5

No disorders were found for UBA52P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBA52P5 Gene

Publications for UBA52P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for UBA52P5 Gene

Sources for UBA52P5 Gene

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