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Aliases for UBA52P5 Gene

Subcategory (RNA class) for UBA52P5 Gene

antisense

Aliases for UBA52P5 Gene

  • Ubiquitin A-52 Residue Ribosomal Protein Fusion Product 1 Pseudogene 5 2 3
  • Ribosomal Protein L40 Pseudogene 3
  • RPL40_2_948 3
  • AC068228.1 5

External Ids for UBA52P5 Gene

ORGUL Members for UBA52P5 Gene

Previous GeneCards Identifiers for UBA52P5 Gene

  • GC08U901112
  • GC08P124251
  • GC08P119574

Summaries for UBA52P5 Gene

GeneCards Summary for UBA52P5 Gene

UBA52P5 (Ubiquitin A-52 Residue Ribosomal Protein Fusion Product 1 Pseudogene 5) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for UBA52P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBA52P5 Gene

Genomics for UBA52P5 Gene

Regulatory Elements for UBA52P5 Gene

Enhancers for UBA52P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H123240 1.1 ENCODE 0.7 +4.2 4233 1 PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 DEK WDYHV1 FAM83A C8orf76 UBA52P5
GH08H123216 0.9 ENCODE 0.4 -19.4 -19443 1 TBP PKNOX1 FOXA2 BRCA1 RAD21 RARA YY1 ELK1 RCOR1 FOS FAM83A ENSG00000253258 ENSG00000221461 GC08P123216 UBA52P5
GH08H123235 0.5 ENCODE 0.7 -1.1 -1060 1 RFX1 SCRT2 RFX5 EZH2 UBA52P5 GC08P123216
GH08H123220 0.7 ENCODE 0.4 -16.0 -16047 0 CTCF ARNT ARID4B SIN3A RAD21 RFX5 CC2D1A SMC3 DEK SMARCA5 FAM83A ENSG00000253258 ENSG00000221461 GC08P123216 UBA52P5
GH08H123232 0.4 ENCODE 0.7 -4.2 -4248 1 JUND ATF3 C8orf76 FAM83A UBA52P5 GC08P123216
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around UBA52P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for UBA52P5 Gene

Chromosome:
8
Start:
123,236,852 bp from pter
End:
123,237,216 bp from pter
Size:
365 bases
Orientation:
Plus strand

Genomic View for UBA52P5 Gene

Genes around UBA52P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBA52P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBA52P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBA52P5 Gene

Proteins for UBA52P5 Gene

Post-translational modifications for UBA52P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBA52P5 Gene

Domains & Families for UBA52P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBA52P5 Gene

Function for UBA52P5 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for UBA52P5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBA52P5 Gene

Localization for UBA52P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for UBA52P5 Gene

Pathways & Interactions for UBA52P5 Gene

SuperPathways for UBA52P5 Gene

No Data Available

Interacting Proteins for UBA52P5 Gene

Gene Ontology (GO) - Biological Process for UBA52P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBA52P5 Gene

Drugs & Compounds for UBA52P5 Gene

No Compound Related Data Available

Transcripts for UBA52P5 Gene

mRNA/cDNA for UBA52P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for UBA52P5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for UBA52P5 Gene

No ASD Table

Relevant External Links for UBA52P5 Gene

GeneLoc Exon Structure for
UBA52P5
ECgene alternative splicing isoforms for
UBA52P5

Expression for UBA52P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for UBA52P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of UBA52P5 Gene:

UBA52P5
genes like me logo Genes that share expression patterns with UBA52P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for UBA52P5 Gene

Orthologs for UBA52P5 Gene

Evolution for UBA52P5 Gene

ENSEMBL:
Gene Tree for UBA52P5 (if available)
TreeFam:
Gene Tree for UBA52P5 (if available)

No data available for Orthologs for UBA52P5 Gene

Paralogs for UBA52P5 Gene

No data available for Paralogs for UBA52P5 Gene

Variants for UBA52P5 Gene

Relevant External Links for UBA52P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBA52P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBA52P5 Gene

Disorders for UBA52P5 Gene

Relevant External Links for UBA52P5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBA52P5

No disorders were found for UBA52P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBA52P5 Gene

Publications for UBA52P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for UBA52P5 Gene

Sources for UBA52P5 Gene

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