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Aliases for UBA52P1 Gene

Aliases for UBA52P1 Gene

  • Ubiquitin A-52 Residue Ribosomal Protein Fusion Product 1 Pseudogene 1 2 3
  • Ubiquitin And Ribosomal Protein L40 Precursor Pseudogene 1 3
  • Ubiquitin Carboxyl Extension Protein 52 Pseudogene 1 3
  • Ubiquitin-52 Amino Acid Fusion Protein Pseudogene 1 3
  • CTA-242H14.1 5
  • RPL40_1_796 3

External Ids for UBA52P1 Gene

Previous GeneCards Identifiers for UBA52P1 Gene

  • GC00U990394
  • GC07U900048
  • GC07M025471
  • GC07M025502
  • GC07M025695
  • GC07M025780

Summaries for UBA52P1 Gene

GeneCards Summary for UBA52P1 Gene

UBA52P1 (Ubiquitin A-52 Residue Ribosomal Protein Fusion Product 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for UBA52P1 Gene

Genomics for UBA52P1 Gene

Regulatory Elements for UBA52P1 Gene

Enhancers for UBA52P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F025693 0.2 ENCODE 0.8 -4.4 -4445 2.4 ESRRA ATF1 CBX3 PKNOX1 KLF1 HINFP NFRKB ZNF766 CREM L3MBTL2 UBA52P1 LOC646588
GH07F025725 0.9 Ensembl ENCODE 0.3 -36.4 -36364 1.6 PKNOX1 L3MBTL2 NR4A1 MAFG CREB3 ZNF316 CTBP1 SMARCA4 POLR2A GLIS1 LOC646588 UBA52P1
GH07F025731 0.4 ENCODE 0.2 -41.7 -41747 0.8 OSR2 JUND ZNF512 ZNF843 WT1 LOC646588 UBA52P1
GH07F025732 0.2 ENCODE 0.2 -42.7 -42666 0.8 KLF1 PKNOX1 CBX3 ESRRA ATF1 HINFP YY1 ZNF664 E2F6 CREM LOC646588 UBA52P1
GH07F025743 0.6 Ensembl 0.2 -54.1 -54079 0.7 LEF1 RNF2 L3MBTL2 NRF1 NFRKB CEBPB POLR2H POLR2A FOXK2 SMARCA4 LOC646588 UBA52P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around UBA52P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for UBA52P1 Gene

Chromosome:
7
Start:
25,689,396 bp from pter
End:
25,690,070 bp from pter
Size:
675 bases
Orientation:
Minus strand

Genomic View for UBA52P1 Gene

Genes around UBA52P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
UBA52P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for UBA52P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for UBA52P1 Gene

Proteins for UBA52P1 Gene

Post-translational modifications for UBA52P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for UBA52P1 Gene

Domains & Families for UBA52P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for UBA52P1 Gene

Function for UBA52P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for UBA52P1 Gene

Localization for UBA52P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for UBA52P1 Gene

Pathways & Interactions for UBA52P1 Gene

SuperPathways for UBA52P1 Gene

No Data Available

Interacting Proteins for UBA52P1 Gene

Gene Ontology (GO) - Biological Process for UBA52P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for UBA52P1 Gene

Transcripts for UBA52P1 Gene

mRNA/cDNA for UBA52P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for UBA52P1 Gene

No ASD Table

Relevant External Links for UBA52P1 Gene

GeneLoc Exon Structure for
UBA52P1
ECgene alternative splicing isoforms for
UBA52P1

Expression for UBA52P1 Gene

mRNA expression in normal human tissues for UBA52P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of UBA52P1 Gene:

UBA52P1
genes like me logo Genes that share expression patterns with UBA52P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for UBA52P1 Gene

Orthologs for UBA52P1 Gene

Evolution for UBA52P1 Gene

ENSEMBL:
Gene Tree for UBA52P1 (if available)
TreeFam:
Gene Tree for UBA52P1 (if available)

No data available for Orthologs for UBA52P1 Gene

Paralogs for UBA52P1 Gene

No data available for Paralogs for UBA52P1 Gene

Variants for UBA52P1 Gene

Relevant External Links for UBA52P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
UBA52P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for UBA52P1 Gene

Disorders for UBA52P1 Gene

Relevant External Links for UBA52P1

Genetic Association Database (GAD)
UBA52P1
Human Genome Epidemiology (HuGE) Navigator
UBA52P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
UBA52P1

No disorders were found for UBA52P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for UBA52P1 Gene

Publications for UBA52P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The human ubiquitin/52-residue ribosomal protein fusion gene subfamily (UbA52) is composed primarily of processed pseudogenes. (PMID: 1330885) Baker R.T. … Board P.G. (Genomics 1992) 2 3 64
  3. Genome-wide association study identifies a locus at 7p15.2 associated with endometriosis. (PMID: 21151130) Painter J.N. … Zondervan K.T. (Nat. Genet. 2011) 46 64
  4. Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. (PMID: 20935629) Heid I.M. … Lindgren C.M. (Nat. Genet. 2010) 46 64
  5. Association studies of 22 candidate SNPs with late-onset Alzheimer's disease. (PMID: 18780302) Figgins J.A. … Kamboh M.I. (Am. J. Med. Genet. B Neuropsychiatr. Genet. 2009) 46 64

Products for UBA52P1 Gene

Sources for UBA52P1 Gene

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