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Aliases & Descriptions for UAP1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| AGX 2, 3 | | AGX1 1, 2 | | AGX2 2 | | AgX 1 | | OTTHUMP00000032325 2 | | SPAG2 2, 3 |
| | | Descriptions |
|---|
| Antigen X 2, 3 | | Sperm-associated antigen 2 3 | | UDP-N-acetylglucosamine pyrophosphorylase 1 2 | | UDP-N-acetylhexosamine pyrophosphorylase 2 | | UDP-N-acteylglucosamine pyrophosphorylase 1 2 | | sperm associated antigen 2 2 |
|
| | Search outside databases for aliases for UAP1 genePrevious GC identifers: GC01P160166 GC01P158182 GC01P159227 GC01P159718 GC01P159262 |
Summaries for UAP1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222Function: Converts UDP and GlcNAc-1-P into UDP-GlcNAc, and UDP and GalNAc-1-P into UDP-GalNAc. Isoform AGX1 has 2 to 3 times higher activity towards GalNAc-1-P, while isoform AGX2 has 8 times more activity towards GlcNAc-1-PGene Wiki entry for UAP1 |
Genomic Location for UAP1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the UAP1 gene 
Entrez Gene cytogenetic band: 1q23.3 Ensembl cytogenetic band: 1q23.3 HGNC cytogenetic band: 1q23.2UAP1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01P160797:
(about GC identifiers)
Start:
|
160,797,920 bp from pter |
End:
|
160,836,257 bp from pter |
Size:
|
38,338 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000001.9 NT_004487.18
| Proteins for UAP1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222 (See
protein sequence)Recommended Name: UDP-N-acetylhexosamine pyrophosphorylase Size: 522 amino acids; 58769 Da
Subunit: Monomer and homodimer. Isoform AGX1 is a homodimer. Isoform AGX2 is a monomer
Subcellular location: Cytoplasm. Note=In spermatozoa, localized to the principal piece of the tail, the neck region of the head and to a lesser extent, the midpiece of the tail
PDB structures from and Proteopedia :1JV1 (3D)
 1JV3 (3D)
 1JVD (3D)
 1JVG (3D)
 
Secondary accessions: Q5VTA9 Q5VTB0 Q5VTB1 Q96GM2Alternative splicing: 3 isoforms: Q16222-1 Q16222-2 Q16222-3 REFSEQ proteins: NP_003106.3
ENSEMBL proteins: ENSP00000271469 ENSP00000356903 ENSP00000356902 ENSP00000356901
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005737 | cytoplasm |
IEA | -- | About this table
Antibodies for UAP1: Assays for UAP1: | Protein
Domains/ Families for UAP1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q16222
ProtoNet protein and cluster: Q16222 1 Blocks protein family: IPB002618 UTP--glucose-1-phosphate uridylyltransferase
UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222Similarity: Belongs to the UDPGP type 1 family | Gene Function for UAP1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003115
Applied Biosystems Silencer® siRNAs for UAP1
Sigma-Aldrich siRNA for UAP1  Sigma-Aldrich shRNA for UAP1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_003115                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003115                                  untagged cDNA clone in CMV expression vector: NM_003115 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003115
UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222Function: Converts UDP and GlcNAc-1-P into UDP-GlcNAc, and UDP and GalNAc-1-P into UDP-GalNAc. Isoform AGX1 has 2 to 3 times higher activity towards GalNAc-1-P, while isoform AGX2 has 8 times more activity towards GlcNAc-1-PCatalytic activity: UTP + N-acetyl-alpha-D-glucosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-glucosamine2 Gene Ontology (GO) molecular function terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0003977 | UDP-N-acetylglucosamine diphosphorylase activity |
TAS | 9603950 | | GO:0016740 | transferase activity |
IEA | -- | About this table | Pathways & Interactions for UAP1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 1 Sigma-Aldrich "Your Favorite Gene" Pathway for UAP1 (Your Favorite Gene powered by Ingenuity) 
UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222Pathway: Nucleotide-sugar biosynthesis; UDP-N-acetyl-D-glucosamine biosynthesis; UDP-N-acetyl-D-glucosamine from N-acetyl-alpha-D-glucosamine 1-phosphate: step 1/1 5 Interacting proteins for UAP1 (ENSP000003569023) via UniProtKB, MINT, and/or STRINGAbout this table
2 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006048 | UDP-N-acetylglucosamine biosynthetic process |
TAS | 9603950 | | GO:0008152 | metabolic process |
IEA | -- | About this table
|
Drugs & Compounds for UAP1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for UAP1 3 Novoseek chemical compound relationships for UAP1 gene
About this table
|
Transcripts for UAP1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_003115
Sigma-Aldrich siRNA for UAP1  Sigma-Aldrich shRNA for UAP1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_003115 REFSEQ mRNAs for UAP1 gene: NM_003115.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_003115               OriGene GFP tagged cDNA clone in CMV expression vector: NM_003115                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_003115                                  untagged cDNA clone in CMV expression vector: NM_003115  Additional cDNA sequence: AB011004.1 AK312685.1 BC009377.2 S73498.1 15 DOTS entries: DT.443886 DT.95145449 DT.100795034 DT.92030233 DT.92450348 DT.121390409 DT.91734525 DT.95145462 DT.100795030 DT.100795033 DT.100795035 DT.120969840 DT.206569 DT.40111992 DT.65286153 24/264 AceView cDNA sequences (see all 264
):BU161080 CB125476 CB129809 BQ774634 AL045213 BM785654 BM461698 BU508403 AW827133 BU154308 BE883933 AB011004 BU166439 BC009377 AL576735 AI373868 CN482165 AW136085 AI765598 BP346402 BQ774669 BM450979 NM_003115 AI989289
highest scoring ESTs for UAP1:AB011004 AA115451 AA448531 AA551705 AA720527 AA876680 AA934547 AI598039 AI608944 AI674137 Unigene Cluster for UAP1: UDP-N-acteylglucosamine pyrophosphorylase 1 Hs.492859 [show with all ESTs]Unigene Representative Sequence: NM_003115
GeneLoc Exon Structure
5/9 Alternative Splicing Database (ASD) splice patterns (SP) for UAP1 (see all 9
)
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3a | · | 3b | ^ | 4a | · | 4b | ^ | 5a | · | 5b | · | 5c | ^ | 6a | · | 6b | ^ | 7a | · | 7b | ^ | 8a | · | 8b | · | 8c | · | 8d | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | ^ | 12 | ^ | 13a | · | 13b | · | 13c | |
| SP1: | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for UAP1
4 Ensembl transcripts including schematic representations: ENST00000271469
ENST00000367926
ENST00000367925
ENST00000367924
|
Expression for UAP1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| UAP1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for UAP1
1 / 2 / 3 3 probe-sets matching UAP1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTGAAAGGTT
SOURCE GeneReport for Unigene cluster: Hs.492859
Expression variation in blood from EXPOLDB for UAP1 UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222Tissue specificity: Widely expressed. Isoform AGX1 is more abundant in testis than isoform AGX2, while isoform AGX2 is more abundant than isoform AGX1 in somatic tissue. Expressed at low level in placenta, muscle and liver |
Orthologs for UAP1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for UAP1 gene from 5/20 species (see all 20
)
About this table Species with no ortholog for UAP1
ENSEMBL Gene Tree for UAP1 | Paralogs for UAP1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for UAP1 gene
- UAP1L12
Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for UAP1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for UAP1 (up to first 250kb)
|
Disorders & Mutations for UAP1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602862
UniProtKB/Swiss-Prot: UAP1_HUMAN, Q16222
Antigen implicated in antibody-mediated male infertility4 Novoseek disease relationships for UAP1 gene
About this table
|
Medical News for UAP1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for UAP1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/38 PubMed articles for UAP1 gene (see all 38
):- Characterization of a human antigen with sera from infertile patients. (PubMed id 8025165)1, 2, 3, 4 Diekman A.B. and Goldberg E. (1994)
- The eukaryotic UDP-N-acetylglucosamine pyrophosphorylases: gene cloning, protein expression, and catalytic mechanism. (PubMed id 9603950)1, 2, 3, 4 Mio T.... Yamada-Okabe H. (1998)
- A 17-amino acid insert changes UDP-N-acetylhexosamine pyrophosphorylase specificity from UDP-GalNAc to UDP-GlcNAc. (PubMed id 9765219)1, 3, 4 Wang-Gillam A.... Elbein A.D. (1998)
- Crystal structures of two human pyrophosphorylase isoforms in complexes with UDPGlc(Gal)NAc: role of the alternatively spliced insert in the enzyme oligomeric assembly and active site architecture. (PubMed id 11707391)1, 3, 4 Peneff C.... Bourne Y. (2001)
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)3, 4 Gregory S.G.... Bentley D.R. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Expression of the human antigen SPAG2 in the testis and localization to the outer dense fibers in spermatozoa. (PubMed id 9621304)1, 3 Diekman A.B....Goldberg E. (1998)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)3 Strausberg R.L....Marra M.A. (2002)
- UDP-N-acetylglucosamine pyrophosphorylase, a key enzyme in encysting Giardia, is allosterically regulated. (PubMed id 10799561)1 Bulik D.A....Jarroll E.L. (2000)
- X antigen/antibody markers in hepadnavirus infections. Presence and significance of hepadnavirus X gene product(s) in serum. (PubMed id 2311861)1 Feitelson M.A....Blumberg B.S. (1990)
|
Search for UAP1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing UAP1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing UAP1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing UAP1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for UAP1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for UAP1:

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Incremental update: 13 Oct 2009
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