Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TYW5 Gene

protein-coding   GIFtS: 39
GCID: GC02M200794

tRNA-yW synthesizing protein 5

(Previous name: chromosome 2 open reading frame 60 )
(Previous symbol: C2orf60)
 Explore 2 diseases affiliated with
TYW5 via our new
 Human Malady Compendium 
Biological research products
for TYW5
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
TRNA-YW Synthesizing Protein 51 2     JmjC Domain-Containing Protein C2orf602
C2orf601 2 3     TRNA Wybutosine-Synthesizing Protein 52
HTYW51     TRNA YW-Synthesizing Enzyme 52
FLJ379531     EC 1.14.11.-3
Chromosome 2 Open Reading Frame 601     

External Ids:    HGNC: 267541   Entrez Gene: 1294502   Ensembl: ENSG000001629717   UniProtKB: A2RUC43   
ORGUL members:         
NONCODE:n406344    

Export aliases for TYW5 gene to outside databases


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: TYW5_HUMAN, A2RUC4
Function: tRNA hydroxylase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper
modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic
phenylalanine tRNA. Catalyzes the hydroxylation of 7-(a-amino-a-carboxypropyl)wyosine (yW-72) into undermodified
hydroxywybutosine (OHyW*). OHyW* being further transformed into hydroxywybutosine (OHyW) by LCMT2/TYW4. OHyW is a
derivative of wybutosine found in higher eukaryotes




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000002.11  NC_018913.1  NT_005403.17  
Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for TYW5
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for TYW5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TYW5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q33.1   Ensembl cytogenetic band:  2q33.1   HGNC cytogenetic band: 2q33.1

TYW5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TYW5 gene location

GeneLoc information about chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M200794:  view genomic region     (about GC identifiers)

Start:
200,793,634 bp from pter      End:
200,820,459 bp from pter
Size:
26,826 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TYW5_HUMAN, A2RUC4 (See protein sequence)
Recommended Name: tRNA wybutosine-synthesizing protein 5  
Size: 315 amino acids; 36548 Da
Cofactor: Binds 1 Fe(2+) ion per subunit
Subunit: Homodimer
Sequence caution: Sequence=AAH63502.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
2 PDB 3D structures from and Proteopedia for TYW5:
3AL5 (3D)        3AL6 (3D)    
Secondary accessions: B2RNE3 Q8N1R2
Alternative splicing: 2 isoforms:  A2RUC4-1   A2RUC4-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for TYW5: NX_A2RUC4

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_A2RUC4

  • TYW5 Protein expression data from MOPED and PaxDb:    About this image 
    TYW5 Protein Expression
    REFSEQ proteins: NP_001034782.1  
    ENSEMBL proteins: 
     ENSP00000346627   ENSP00000420024   ENSP00000398447  

    Human Recombinant Protein Products for TYW5: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: TYW5
    OriGene Protein Over-expression Lysate: TYW5
    OriGene Custom Protein Services for TYW5 
    GenScript Custom Purified and Recombinant Proteins Services for TYW5
    Novus Biologicals TYW5 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TYW5


    TYW5 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for TYW5 
    GenScript Custom Superior Antibodies Services for TYW5
    Novus Biologicals TYW5 Antibodies
    Abcam antibodies for TYW5 
    Uscn Antibodies for TYW5
    ThermoFisher Antibody for TYW5

    Assay Products for TYW5: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for TYW5
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for TYW5


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TYW5 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR003347 JmjC_dom

    Graphical View of Domain Structure for InterPro Entry A2RUC4

    ProtoNet protein and cluster: A2RUC4

    UniProtKB/Swiss-Prot: TYW5_HUMAN, A2RUC4
    Similarity: Belongs to the TYW5 family
    Similarity: Contains 1 JmjC domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: TYW5_HUMAN, A2RUC4
    Function: tRNA hydroxylase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper
    modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic
    phenylalanine tRNA. Catalyzes the hydroxylation of 7-(a-amino-a-carboxypropyl)wyosine (yW-72) into undermodified
    hydroxywybutosine (OHyW*). OHyW* being further transformed into hydroxywybutosine (OHyW) by LCMT2/TYW4. OHyW is a
    derivative of wybutosine found in higher eukaryotes

         Enzyme Number (IUBMB): EC 1.14.11.-1

         Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000049tRNA binding IDA--
    GO:0005506iron ion binding IDA--
    GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA--
    GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IDA--
    GO:0042803protein homodimerization activity IDA--
         
    TYW5 for ontologies           About GeneDecksing


    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for TYW5 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: TYW5
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TYW5
    8/16 QIAGEN miScript miRNA Assays for microRNAs that regulate TYW5 (see all 16):
    hsa-miR-21* hsa-miR-579 hsa-miR-3194-5p hsa-miR-134 hsa-miR-29c hsa-miR-29a hsa-miR-4314 hsa-miR-511
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TYW5
    OriGene shRNA RFP: TYW5
    OriGene siRNA: TYW5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TYW5
    Sirion Biotech Custom design and validation of potent shRNA sequences against TYW5 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for TYW5
    Sirion Biotech Customized adenovirus for overexpression of TYW5 
    Sirion Biotech Customized adenovirus for potent knockdown of TYW5

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TYW5 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TYW5 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for TYW5
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TYW5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TYW5 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for TYW5
    Search LifeMap BioReagents cell lines for TYW5
    Sirion Biotech Customized stable knockdown cell line services for TYW5 
    Sirion Biotech Customized inducible knockdown cell line services for TYW5
    Sirion Biotech Customized stable overexpressing cell line services for TYW5
    Sirion Biotech Customized inducible overexpressing cell line services for TYW5

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TYW5


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    UniProtKB/Swiss-Prot: TYW5_HUMAN, A2RUC4
    Pathway: tRNA modification; wybutosine-tRNA(Phe) biosynthesis

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for TYW5

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0031591wybutosine biosynthetic process IDA--

    TYW5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TYW5
    Search CenterWatch for drugs/clinical trials and news about TYW5 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TYW5 gene (2 alternative transcripts): 
    NM_152382.1  NM_001039693.2  

    Unigene Cluster for TYW5:

    TRNA-yW synthesizing protein 5
    Hs.204619  [show with all ESTs]
    Unigene Representative Sequence: NM_001039693
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000354611(uc002uvi.4) ENST00000483328(uc002uvj.4 uc002uvk.4 uc010fss.3)
    ENST00000452512 ENST00000441832 ENST00000493181(uc002uvl.3)

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: TYW5
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat TYW5
    8/16 QIAGEN miScript miRNA Assays for microRNAs that regulate TYW5 (see all 16):
    hsa-miR-21* hsa-miR-579 hsa-miR-3194-5p hsa-miR-134 hsa-miR-29c hsa-miR-29a hsa-miR-4314 hsa-miR-511
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TYW5
    OriGene shRNA RFP: TYW5
    OriGene siRNA: TYW5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TYW5
    Sirion Biotech Custom design and validation of potent shRNA sequences against TYW5 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TYW5 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TYW5 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript Custom all cDNA clones Services for TYW5
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for TYW5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TYW5 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TYW5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TYW5
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TYW5
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TYW5

    Additional cDNA sequence: 

    AK095272.1 AK293064.1 AK298977.1 BC025758.1 BC063502.1 BC132835.1 BC136837.1 BC144420.1 
    BX647677.1 NR_004862.1 

    8 DOTS entries:

    DT.308338  DT.120941107  DT.211263  DT.211265  DT.454709  DT.100710886  DT.100714615  DT.111614 

    24/85 AceView cDNA sequences (see all 85):

    BX094248 AI057373 AA632314 AI052737 BX107886 CB529067 BM721903 CB305779 
    BC063502 AI868437 AA700050 BF438043 T40732 BI769592 AA402102 BQ424547 
    AI685332 AK095272 AI274119 BE349015 W21118 BM465624 NM_152382 BM728466 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for TYW5    About this scheme

    ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b
    SP1:                          -     -                       -                           
    SP2:                          -     -                       -     -                     
    SP3:                                -                       -                           
    SP4:                          -     -                                                   
    SP5:                                                                                    


    ECgene alternative splicing isoforms for TYW5

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TYW5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCGAAACCTT
    TYW5 Expression
    About this image
    See TYW5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TYW5

    SOURCE GeneReport for Unigene cluster: Hs.204619
        SABiosciences Custom PCR Arrays for TYW5

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TYW5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat TYW5
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TYW5
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TYW5
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TYW5

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for TYW5 gene from 4/20 species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves TYW51 tRNA-yW synthesizing protein 5 77.2(n)
    77.52(a)
      424065  XM_421921.2  XP_421921.2 
    lizard
    (Anolis carolinensis)
    Reptilia TYW56
    --
    78(a)
    1 ↔ 1
    1(117571541-117587858)
    African clawed frog
    (Xenopus laevis)
    Amphibia BJ077044.12   -- 76.74(n)    BJ077044.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.148962 Transcribed sequence with weak similarity to protein more 72.96(n)    BM035027.1 


    ENSEMBL Gene Tree for TYW5 (if available)
    TreeFam Gene Tree for TYW5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TYW5 gene
    JMJD72  HSPBAP12  KDM82  HIF1AN2  

    TYW5 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for TYW5
    PGOHUM00000238264


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/319 NCBI SNPs in TYW5 are shown (see all 319    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 2 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs102022531,2
    C,F,H--200793205(+) ACAACA/GAACAA 3 -- int120Minor allele frequency- G:0.50NS EA NA WA 2338
    rs745118801,2
    --200793226(+) ACCTGC/GTGTTT 3 -- int10--------
    rs771600581,2
    F--200793324(+) TTTCAA/GATGAG 3 -- int11Minor allele frequency- G:0.02NA 120
    rs1402107191,2
    C--200793341(+) TGAAC-/CTTTTTTG 3 -- int10--------
    rs1512930011,2
    --200793349(+) TTTTGC/TACAAA 3 -- int10--------
    rs1893478591,2
    --200793400(+) CACTAC/TATCCA 3 -- int10--------
    rs1466257881,2
    --200793406(+) ATCCA-/CTTCTTTT 3 -- int10--------
    rs168320511,2
    C,F,H--200793784(+) ACTCAT/CGTTGC 2 -- nc-transcript-variantut3121Minor allele frequency- C:0.10NA NS EA WA 2274
    rs1489523871,2
    C--200793889(+) TGGAA-/CTCTTAG 2 -- ut31 nc-transcript-variant0--------
    rs113113821,2
    C,F--200793928(+) GGGGGA/-AGGGA 2 -- ut31 nc-transcript-variant3Minor allele frequency- -:0.50NA 6

    HapMap Linkage Disequilibrium report for TYW5 (200793634 - 200820459 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for TYW5: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TYW5
    DNA2.0 Custom Variant and Variant Library Synthesis for TYW5

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TYW5 for disorders           About GeneDecksing

    2 diseases for TYW5:    About MalaCards
    noma    malaria


    Export disorders for TYW5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TYW5 gene integrated from 9 sources:
    (articles sorted by number of sources associating them with TYW5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Expanding role of the jumonji C domain as an RNA hydroxylase. (PubMed id 20739293)1, 2, 3 Noma A.... Suzuki T. (2010)
    2. Crystal structure of a novel JmjC-domain-containing protein, TYW5, involved in tRNA modification. (PubMed id 20972222)1, 2 Kato M....Nureki O. (2011)
    3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)2 Hillier L.W....Wilson R.K. (2005)
    4. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PubMed id 15146197)1 Brandenberger R.... Stanton L.W. (2004)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
    6. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)2 Ota T.... Sugano S. (2004)
    7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
    8. Normalization and subtraction: two approaches to facilitate gene discovery. (PubMed id 8889548)1 Bonaldo M.F.... Soares M.B. (1996)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 129450 HGNC: 26754 AceView: FLJ37953 Ensembl:ENSG00000162971 euGenes: HUgn129450
    ECgene: TYW5 H-InvDB: TYW5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TYW5 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TYW5 gene:
    Search GeneIP for patents involving TYW5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for TYW5  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for TYW5   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for TYW5  
     OriGene Protein Over-expression Lysate for TYW5   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for TYW5   OriGene 3'-UTR Clone for TYW5  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for TYW5   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for TYW5  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for TYW5   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for TYW5   OriGene Custom Protein Services for TYW5  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat TYW5
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TYW5
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TYW5
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat TYW5
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TYW5
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TYW5
     GenScript Custom Purified and Recombinant Proteins Services for TYW5 GenScript Custom cDNA clones with any tag delivered in your preferred vector Services for TYW5
     GenScript Custom Assay Services for TYW5 GenScript Custom Superior Antibodies Services for TYW5
     GenScript Custom overexpressing Cell Line Services for TYW5 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Search Regulatory tfbs for TYW5
     Search Chromatin IP Primers for TYW5
     RT2 qPCR Primer Assay in human, mouse, rat TYW5
     Search GNC Networks for TYW5
     SABiosciences Custom PCR Arrays for TYW5
     Search Tocris compounds for TYW5
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     TYW5 antibodies
     TYW5 lysates
     Antibodies for TYW5
     See all of Abcam's Antibodies, Kits and Proteins for TYW5
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     TYW5 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for TYW5
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TYW5
     Browse SwitchGear 3'UTR luciferase reporter plasmids for TYW5
     Browse SwitchGear Promoter luciferase reporter plasmids for TYW5
     ThermoFisher Antibody for TYW5
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat TYW5
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for TYW5
    Sirion Biotech Customized:
     stable knockdown cell line services for TYW5
     inducible knockdown cell line services for TYW5
     design and validation of potent shRNA sequences against TYW5
     adenovirus for potent knockdown of TYW5
     adenovirus for overexpression of TYW5
     stable overexpressing cell line services for TYW5
     inducible overexpressing cell line services for TYW5
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      TYW5 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 106 solr: 1.4