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Aliases for TXLNGY Gene

Aliases for TXLNGY Gene

  • Taxilin Gamma Pseudogene, Y-Linked 2 3 4
  • Taxilin Gamma 2, Pseudogene 2 3
  • CYorf15A 3 4
  • CYorf15B 3 4
  • TXLNG2P 3 4
  • Lipopolysaccaride-Specific Response 5-Like Protein 3
  • Chromosome Y Open Reading Frame 15A 2
  • Chromosome Y Open Reading Frame 15B 2
  • Gamma-Taxilin 2 Pseudogene 4

External Ids for TXLNGY Gene

Previous HGNC Symbols for TXLNGY Gene

  • CYorf15A
  • CYorf15B
  • TXLNG2P

Summaries for TXLNGY Gene

GeneCards Summary for TXLNGY Gene

TXLNGY (Taxilin Gamma Pseudogene, Y-Linked) is a Pseudogene. GO annotations related to this gene include syntaxin binding.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TXLNGY Gene

Genomics for TXLNGY Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for TXLNGY Gene

Chromosome:
Y
Start:
19,567,313 bp from pter
End:
19,607,170 bp from pter
Size:
39,858 bases
Orientation:
Plus strand

Genomic View for TXLNGY Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TXLNGY Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TXLNGY Gene

No data available for Regulatory Elements for TXLNGY Gene

Proteins for TXLNGY Gene

  • Protein details for TXLNGY Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZA5-TXNG2_HUMAN
    Recommended name:
    Putative gamma-taxilin 2
    Protein Accession:
    Q9BZA5

    Protein attributes for TXLNGY Gene

    Size:
    131 amino acids
    Molecular mass:
    14632 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAK13476.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=AAK13476.1; Type=Frameshift; Positions=86, 110; Evidence={ECO:0000305};

neXtProt entry for TXLNGY Gene

Proteomics data for TXLNGY Gene at MOPED

Post-translational modifications for TXLNGY Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TXLNGY Gene

Domains & Families for TXLNGY Gene

Protein Domains for TXLNGY Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for TXLNGY Gene

Graphical View of Domain Structure for InterPro Entry

Q9BZA5

UniProtKB/Swiss-Prot:

TXNG2_HUMAN :
  • Belongs to the taxilin family.
Family:
  • Belongs to the taxilin family.
genes like me logo Genes that share domains with TXLNGY: view

No data available for Gene Families for TXLNGY Gene

Function for TXLNGY Gene

Gene Ontology (GO) - Molecular Function for TXLNGY Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019905 syntaxin binding IEA --
genes like me logo Genes that share ontologies with TXLNGY: view
genes like me logo Genes that share phenotypes with TXLNGY: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TXLNGY Gene

Localization for TXLNGY Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TXLNGY Gene

Pathways & Interactions for TXLNGY Gene

SuperPathways for TXLNGY Gene

No Data Available

Interacting Proteins for TXLNGY Gene

Gene Ontology (GO) - Biological Process for TXLNGY Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TXLNGY Gene

Drugs & Compounds for TXLNGY Gene

No Compound Related Data Available

Transcripts for TXLNGY Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TXLNGY Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5
SP1: -
SP2:

Relevant External Links for TXLNGY Gene

GeneLoc Exon Structure for
TXLNGY
ECgene alternative splicing isoforms for
TXLNGY

Expression for TXLNGY Gene

mRNA expression in normal human tissues for TXLNGY Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for TXLNGY Gene



mRNA Expression by UniProt/SwissProt for TXLNGY Gene

Q9BZA5-TXNG2_HUMAN
Tissue specificity: Ubiquitously expressed.
genes like me logo Genes that share expression patterns with TXLNGY: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues and Protein tissue co-expression partners for TXLNGY Gene

Orthologs for TXLNGY Gene

Evolution for TXLNGY Gene

ENSEMBL:
Gene Tree for TXLNGY (if available)
TreeFam:
Gene Tree for TXLNGY (if available)

No data available for Orthologs for TXLNGY Gene

Paralogs for TXLNGY Gene

No data available for Paralogs for TXLNGY Gene

Variants for TXLNGY Gene

Sequence variations from dbSNP and Humsavar for TXLNGY Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs3908 -- 19,571,282(+) acggg(-/G)ttttt intron-variant
rs3909 -- 19,571,276(+) ttgtt(-/AA)acggg intron-variant
rs3910 -- 19,571,345(+) ttgta(A/T)gtggg intron-variant
rs3911 -- 19,571,568(+) aaaat(A/G)tttga intron-variant
rs3912 -- 19,570,453(+) tgtat(A/T)gtttc intron-variant

Relevant External Links for TXLNGY Gene

HapMap Linkage Disequilibrium report
TXLNGY

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TXLNGY Gene

Disorders for TXLNGY Gene

Relevant External Links for TXLNGY

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TXLNGY
genes like me logo Genes that share disorders with TXLNGY: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TXLNGY Gene

Publications for TXLNGY Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 67
  2. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 67
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 67
  4. Identification of genes related to Parkinson's disease using expressed sequence tags. (PMID: 17213182) Kim J.M. … Kim N.S. (DNA Res. 2006) 67
  5. Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee. (PMID: 16136134) Hughes J.F. … Page D.C. (Nature 2005) 67

Products for TXLNGY Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate TXLNGY
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TXLNGY
    • Block miRNA regulation of TXLNGY using miScript Target Protectors

    Sources for TXLNGY Gene

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