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Aliases for TXLNGY Gene

Aliases for TXLNGY Gene

  • Taxilin Gamma Pseudogene, Y-Linked 2 3 4
  • CYorf15A 3 4 6
  • Taxilin Gamma 2, Pseudogene 2 3
  • CYorf15B 3 4
  • TXLNG2P 3 4
  • Lipopolysaccaride-Specific Response 5-Like Protein 3
  • Chromosome Y Open Reading Frame 15A 2
  • Chromosome Y Open Reading Frame 15B 2
  • Gamma-Taxilin 2 Pseudogene 4

External Ids for TXLNGY Gene

Previous Symbols for TXLNGY Gene

  • CYorf15A
  • CYorf15B
  • TXLNG2P

Summaries for TXLNGY Gene

GeneCards Summary for TXLNGY Gene

TXLNGY (Taxilin Gamma Pseudogene, Y-Linked) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TXLNGY Gene

Genomics for TXLNGY Gene

Genomic Location for TXLNGY Gene

Start:
19,567,313 bp from pter
End:
19,607,170 bp from pter
Size:
39,858 bases
Orientation:
Plus strand

Genomic View for TXLNGY Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TXLNGY Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TXLNGY Gene

No data available for Regulatory Elements for TXLNGY Gene

Proteins for TXLNGY Gene

  • Protein details for TXLNGY Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZA5-TXNG2_HUMAN
    Recommended name:
    Putative gamma-taxilin 2
    Protein Accession:
    Q9BZA5
    Secondary Accessions:

    Protein attributes for TXLNGY Gene

    Size:
    131 amino acids
    Molecular mass:
    14632 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAK13476.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=AAK13476.1; Type=Frameshift; Positions=86, 110; Evidence={ECO:0000305};

neXtProt entry for TXLNGY Gene

Proteomics data for TXLNGY Gene at MOPED

Post-translational modifications for TXLNGY Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TXLNGY Gene

Domains for TXLNGY Gene

Protein Domains for TXLNGY Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

TXNG2_HUMAN
Family:
  • Belongs to the taxilin family.:
    • Q9BZA5
genes like me logo Genes that share domains with TXLNGY: view

No data available for Gene Families for TXLNGY Gene

Function for TXLNGY Gene

Gene Ontology (GO) - Molecular Function for TXLNGY Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019905 syntaxin binding IEA --
genes like me logo Genes that share ontologies with TXLNGY: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TXLNGY Gene

Localization for TXLNGY Gene

No data available for Gene Ontology (GO) - Cellular Components for TXLNGY Gene

Pathways for TXLNGY Gene

SuperPathways for TXLNGY Gene

No Data Available

Interacting Proteins for TXLNGY Gene

Gene Ontology (GO) - Biological Process for TXLNGY Gene

None

No data available for Pathways by source for TXLNGY Gene

Transcripts for TXLNGY Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TXLNGY Gene

No ASD Table

Relevant External Links for TXLNGY Gene

GeneLoc Exon Structure for
TXLNGY
ECgene alternative splicing isoforms for
TXLNGY

Expression for TXLNGY Gene

mRNA expression in normal human tissues for TXLNGY Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TXLNGY Gene

mRNA Expression by UniProt/SwissProt for TXLNGY Gene

Q9BZA5-TXNG2_HUMAN
Tissue specificity: Ubiquitously expressed.
genes like me logo Genes that share expressions with TXLNGY: view

Orthologs for TXLNGY Gene

Evolution for TXLNGY Gene

ENSEMBL:
Gene Tree for TXLNGY (if available)
TreeFam:
Gene Tree for TXLNGY (if available)

No data available for Orthologs for TXLNGY Gene

Paralogs for TXLNGY Gene

No data available for Paralogs for TXLNGY Gene

Variants for TXLNGY Gene

Sequence variations from dbSNP and Humsavar for TXLNGY Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs3900 -- 19,568,371(+) TGAAT(C/G)CTCTT intron-variant
rs3902 -- 19,568,761(+) CTAAC(A/G)GAAAG intron-variant
rs3908 -- 19,571,282(+) acggg(-/G)ttttt intron-variant
rs3909 -- 19,571,276(+) ttgtt(-/AA)acggg intron-variant
rs3910 -- 19,571,345(+) ttgta(A/T)gtggg intron-variant

Relevant External Links for TXLNGY Gene

HapMap Linkage Disequilibrium report
TXLNGY

No data available for Structural Variations from Database of Genomic Variants (DGV) for TXLNGY Gene

Disorders for TXLNGY Gene

No disorders were found for TXLNGY Gene.

No data available for UniProtKB/Swiss-Prot for TXLNGY Gene

Publications for TXLNGY Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee. (PMID: 16136134) Hughes J.F. … Page D.C. (Nature 2005) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. Identification of genes related to Parkinson's disease using expressed sequence tags. (PMID: 17213182) Kim J.M. … Kim N.S. (DNA Res. 2006) 3

Products for TXLNGY Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate TXLNGY
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for TXLNGY
    • Block miRNA regulation of TXLNGY using miScript Target Protectors

    Sources for TXLNGY Gene

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