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Aliases for TVP23C Gene

Aliases for TVP23C Gene

  • Trans-Golgi Network Vesicle Protein 23 Homolog C (S. Cerevisiae) 2 3
  • Family With Sequence Similarity 18, Member B2 2 3
  • FAM18B2 3 4
  • Golgi Apparatus Membrane Protein TVP23 Homolog C 3
  • Protein FAM18B2 3

External Ids for TVP23C Gene

Previous HGNC Symbols for TVP23C Gene

  • FAM18B2

Previous GeneCards Identifiers for TVP23C Gene

  • GC17M015343
  • GC17M015349
  • GC17M015353

Summaries for TVP23C Gene

GeneCards Summary for TVP23C Gene

TVP23C (Trans-Golgi Network Vesicle Protein 23 Homolog C (S. Cerevisiae)) is a Protein Coding gene. An important paralog of this gene is TVP23B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TVP23C Gene

Genomics for TVP23C Gene

Genomic Location for TVP23C Gene

15,502,264 bp from pter
15,563,631 bp from pter
61,368 bases
Minus strand

Genomic View for TVP23C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TVP23C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TVP23C Gene

No data available for Regulatory Elements for TVP23C Gene

Proteins for TVP23C Gene

  • Protein details for TVP23C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Golgi apparatus membrane protein TVP23 homolog C
    Protein Accession:
    Secondary Accessions:
    • Q3LIC7

    Protein attributes for TVP23C Gene

    276 amino acids
    Molecular mass:
    31105 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TVP23C Gene


neXtProt entry for TVP23C Gene

Proteomics data for TVP23C Gene at MOPED

Post-translational modifications for TVP23C Gene

  • Ubiquitination at Lys192
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for TVP23C Gene

Domains for TVP23C Gene

Protein Domains for TVP23C Gene

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the TVP23 family.
  • Belongs to the TVP23 family.
genes like me logo Genes that share domains with TVP23C: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for TVP23C Gene

Function for TVP23C Gene

Phenotypes for TVP23C Gene

GenomeRNAi human phenotypes for TVP23C:
genes like me logo Genes that share phenotypes with TVP23C: view

Animal Model Products

CRISPR Products

miRNA for TVP23C Gene

miRTarBase miRNAs that target TVP23C

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TVP23C

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for TVP23C Gene

Localization for TVP23C Gene

Subcellular locations from UniProtKB/Swiss-Prot for TVP23C Gene

Membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for TVP23C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TVP23C: view

No data available for Subcellular locations from COMPARTMENTS for TVP23C Gene

Pathways for TVP23C Gene

SuperPathways for TVP23C Gene

No Data Available

Interacting Proteins for TVP23C Gene

Gene Ontology (GO) - Biological Process for TVP23C Gene


No data available for Pathways by source for TVP23C Gene

Transcripts for TVP23C Gene

Unigene Clusters for TVP23C Gene

Trans-golgi network vesicle protein 23 homolog C (S. cerevisiae):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TVP23C

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TVP23C Gene

No ASD Table

Relevant External Links for TVP23C Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TVP23C Gene

mRNA expression in normal human tissues for TVP23C Gene

Protein differential expression in normal tissues for TVP23C Gene

This gene is overexpressed in Peripheral blood mononuclear cells (58.0) and Heart (11.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for TVP23C Gene

SOURCE GeneReport for Unigene cluster for TVP23C Gene Hs.164595

genes like me logo Genes that share expressions with TVP23C: view

Expression partners for TVP23C Gene

* - Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for TVP23C Gene

Orthologs for TVP23C Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for TVP23C Gene

Organism Taxonomy Gene Similarity Type Details
(Monodelphis domestica)
Mammalia -- 36
  • 67 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 65 (a)
(Pan troglodytes)
Mammalia -- 36
  • 79 (a)
(Gallus gallus)
Aves FAM18B1 36
  • 63 (a)
(Anolis carolinensis)
Reptilia -- 36
  • 66 (a)
(Danio rerio)
Actinopterygii tvp23b 36
  • 56 (a)
zgc:112148 36
  • 49 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG5021 36
  • 34 (a)
(Caenorhabditis elegans)
Secernentea C34D4.4 36
  • 25 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes TVP23 36
  • 22 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.4306 36
  • 40 (a)
Species with no ortholog for TVP23C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for TVP23C Gene

Gene Tree for TVP23C (if available)
Gene Tree for TVP23C (if available)

Paralogs for TVP23C Gene

Paralogs for TVP23C Gene

(5) SIMAP similar genes for TVP23C Gene using alignment to 7 proteins: Pseudogenes for TVP23C Gene

genes like me logo Genes that share paralogs with TVP23C: view

Variants for TVP23C Gene

Sequence variations from dbSNP and Humsavar for TVP23C Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
VAR_024929 -
VAR_055797 -

Relevant External Links for TVP23C Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TVP23C Gene

Disorders for TVP23C Gene

No disorders were found for TVP23C Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TVP23C Gene

Publications for TVP23C Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3
  3. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  4. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  5. Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. (PMID: 23000965) Povlsen L.K. … Choudhary C. (Nat. Cell Biol. 2012) 3

Products for TVP23C Gene

Sources for TVP23C Gene

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