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Aliases for TVP23A Gene

Aliases for TVP23A Gene

  • Trans-Golgi Network Vesicle Protein 23 Homolog A (S. Cerevisiae) 2 3
  • Family With Sequence Similarity 18, Member A 2 3
  • FAM18A 3 4
  • Golgi Apparatus Membrane Protein TVP23 Homolog A 3
  • Protein FAM18A 3
  • YDR084C 3

External Ids for TVP23A Gene

Previous HGNC Symbols for TVP23A Gene

  • FAM18A

Previous GeneCards Identifiers for TVP23A Gene

  • GC16M010864
  • GC16M010873

Summaries for TVP23A Gene

GeneCards Summary for TVP23A Gene

TVP23A (Trans-Golgi Network Vesicle Protein 23 Homolog A (S. Cerevisiae)) is a Protein Coding gene. An important paralog of this gene is TVP23B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TVP23A Gene

Genomics for TVP23A Gene

Genomic Location for TVP23A Gene

10,760,919 bp from pter
10,818,794 bp from pter
57,876 bases
Minus strand

Genomic View for TVP23A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TVP23A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TVP23A Gene

No data available for Regulatory Elements for TVP23A Gene

Proteins for TVP23A Gene

  • Protein details for TVP23A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Golgi apparatus membrane protein TVP23 homolog A
    Protein Accession:
    Secondary Accessions:
    • B2RUV4
    • B7ZW18

    Protein attributes for TVP23A Gene

    213 amino acids
    Molecular mass:
    24111 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for TVP23A Gene


neXtProt entry for TVP23A Gene

Proteomics data for TVP23A Gene at MOPED

Post-translational modifications for TVP23A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for TVP23A Gene

Domains for TVP23A Gene

Protein Domains for TVP23A Gene


Graphical View of Domain Structure for InterPro Entry



  • Belongs to the TVP23 family.
  • Belongs to the TVP23 family.
genes like me logo Genes that share domains with TVP23A: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for TVP23A Gene

Function for TVP23A Gene

Phenotypes for TVP23A Gene

genes like me logo Genes that share phenotypes with TVP23A: view

Animal Model Products

CRISPR Products

miRNA for TVP23A Gene

miRTarBase miRNAs that target TVP23A

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TVP23A

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targets and HOMER Transcription for TVP23A Gene

Localization for TVP23A Gene

Subcellular locations from UniProtKB/Swiss-Prot for TVP23A Gene

Membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for TVP23A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TVP23A: view

No data available for Subcellular locations from COMPARTMENTS for TVP23A Gene

Pathways for TVP23A Gene

SuperPathways for TVP23A Gene

No Data Available

Interacting Proteins for TVP23A Gene

Gene Ontology (GO) - Biological Process for TVP23A Gene


No data available for Pathways by source for TVP23A Gene

Transcripts for TVP23A Gene

mRNA/cDNA for TVP23A Gene

(6) REFSEQ mRNAs :
(10) Additional mRNA sequences :
(11) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TVP23A Gene

Trans-golgi network vesicle protein 23 homolog A (S. cerevisiae):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TVP23A

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TVP23A Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d ^ 6a · 6b ^ 7a · 7b
SP1: - -
SP2: - - - -
SP3: -
SP4: - -

Relevant External Links for TVP23A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TVP23A Gene

mRNA expression in normal human tissues for TVP23A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues for TVP23A Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for TVP23A Gene

SOURCE GeneReport for Unigene cluster for TVP23A Gene Hs.371576

genes like me logo Genes that share expressions with TVP23A: view

Expression partners for TVP23A Gene

* - Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for TVP23A Gene

Orthologs for TVP23A Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for TVP23A Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia TVP23A 35
  • 88.89 (n)
  • 91.08 (a)
TVP23A 36
  • 90 (a)
(Canis familiaris)
Mammalia TVP23A 35
  • 87.64 (n)
  • 92.49 (a)
TVP23A 36
  • 92 (a)
(Mus musculus)
Mammalia Tvp23a 35
  • 84.98 (n)
  • 88.26 (a)
Tvp23a 16
Tvp23a 36
  • 85 (a)
(Pan troglodytes)
Mammalia TVP23A 35
  • 99.22 (n)
  • 98.12 (a)
TVP23A 36
  • 98 (a)
(Rattus norvegicus)
Mammalia Tvp23a 35
  • 84.19 (n)
  • 87.32 (a)
(Monodelphis domestica)
Mammalia TVP23A 36
  • 80 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 72 (a)
-- 36
  • 67 (a)
(Gallus gallus)
Aves FAM18A 35
  • 73.01 (n)
  • 77.07 (a)
TVP23A 36
  • 65 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia tvp23a 35
  • 73.12 (n)
  • 77.49 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP012432 35
  • 55.69 (n)
  • 51.76 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG5021 35
  • 57.26 (n)
  • 50.26 (a)
CG5021 36
  • 43 (a)
(Caenorhabditis elegans)
Secernentea C34D4.4 36
  • 26 (a)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AGR153C 35
  • 43.36 (n)
  • 32.87 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0C11869g 35
  • 45 (n)
  • 37.14 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes TVP23 35
  • 44 (n)
  • 38.67 (a)
TVP23 36
  • 31 (a)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT1G09330 35
  • 48.37 (n)
  • 38.41 (a)
(Oryza sativa)
Liliopsida Os01g0331900 35
  • 46.91 (n)
  • 37.72 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU02733 35
  • 53.94 (n)
  • 43.64 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes tvp23 35
  • 47 (n)
  • 39.13 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.4306 36
  • 46 (a)
Species with no ortholog for TVP23A:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

Evolution for TVP23A Gene

Gene Tree for TVP23A (if available)
Gene Tree for TVP23A (if available)

Paralogs for TVP23A Gene

Paralogs for TVP23A Gene

(3) SIMAP similar genes for TVP23A Gene using alignment to 5 proteins:

genes like me logo Genes that share paralogs with TVP23A: view

Variants for TVP23A Gene

Sequence variations from dbSNP and Humsavar for TVP23A Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs9888903 -- 10,813,953(+) gagat(C/T)gcacc intron-variant
rs9806948 -- 10,784,569(+) aaaaa(A/T)aaata intron-variant
rs8055116 -- 10,786,919(+) TAGAT(A/G)GCCCA intron-variant
rs8054273 -- 10,812,208(+) aaata(A/C)catgg intron-variant
rs8054084 -- 10,803,300(+) gggcg(A/T)cagag intron-variant

Relevant External Links for TVP23A Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TVP23A Gene

Disorders for TVP23A Gene

No disorders were found for TVP23A Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TVP23A Gene

Publications for TVP23A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for TVP23A Gene

Sources for TVP23A Gene

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